Non-Coding RNA Search

Ss1.1-Ova1-OVR010028B02.5

Sequence:


               
               AATCCGACTGTGGGACAGCTGAGAGGAGTTTGCACGTGTGTCGCGGTTCGGGTGGGCTTG
ATGGAGACAGCCCCCAAGCCTGGCAGTGATGTCCCGCCCAAGAAGGACAGACTTCAGGCC
AAGAGAAAGAAACCTCGGCGATACTGGGAGGAAGAGACCGCTCCGACAGCTGCCGGAGCC
TCTCCGGGTCCCCCTCGTAAACAGAAGAAGAATCGAGAGGCCCGCCCTCAGAAGCCAAAG
AACGCTCCCATCCAAAAGAAGTCTCGGTTCCCCAAGAAGCCCCAGGTCCCAAAGAAATCC
CAAGAATGGAGGAGTCCAGGCCCTCAGCGGAGCTTGTCTGGGGCCCAGGACCCGTTTGCA
GGCCCCGCCCCTGTCCCTGTGGAGGTAGTTCGAAAGTTCCGTCGCATCGACAAATCCAAA
AAGCTGCCCCGTTCCAAGTCCAAAGCCCAAAGCCGGCTTGATGCTGCTGAAGCTGAGGAA
GAGGAAATAAGCGTCAAAGCTGCTCGTTCTGAGCTGCTGCTGGCTGAGGAACCTGGGTTT
CTGGAAGGTGAGGATGGGGAGGACACAGCAAGGATACGCCAGGCTGACATCGCAGAGGCT
GTGGATATTGCAAGTGCAGCCAAGCACTTTGACTTGAACTTGAGGCAGTTTGGACCCTAC
AGGCTGAATTACTCTCGAACAGGGAGGCACCTGGCTTTGGGAGGGCGACGGGGTCATGTG
GCCGCCCTCGACTGGGTGACAAAGAAGCTTATGTGCGAGATCAACGTCATGGAGGCGGTG
CGGGACATCCGGTTTCTGCACTCAGAGGCACTGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCCGACTGTGGGACAGCTGAGAGGAGTTTGCACGTGTGTCGCGGTTCGGGTGGGCTTG
ATGGAGACAGCCCCCAAGCCTGGCAGTGATGTCCCGCCCAAGAAGGACAGACTTCAGGCC
AAGAGAAAGAAACCTCGGCGATACTGGGAGGAAGAGACCGCTCCGACAGCTGCCGGAGCC
TCTCCGGGTCCCCCTCGTAAACAGAAGAAGAATCGAGAGGCCCGCCCTCAGAAGCCAAAG
AACGCTCCCATCCAAAAGAAGTCTCGGTTCCCCAAGAAGCCCCAGGTCCCAAAGAAATCC
CAAGAATGGAGGAGTCCAGGCCCTCAGCGGAGCTTGTCTGGGGCCCAGGACCCGTTTGCA
GGCCCCGCCCCTGTCCCTGTGGAGGTAGTTCGAAAGTTCCGTCGCATCGACAAATCCAAA
AAGCTGCCCCGTTCCAAGTCCAAAGCCCAAAGCCGGCTTGATGCTGCTGAAGCTGAGGAA
GAGGAAATAAGCGTCAAAGCTGCTCGTTCTGAGCTGCTGCTGGCTGAGGAACCTGGGTTT
CTGGAAGGTGAGGATGGGGAGGACACAGCAAGGATACGCCAGGCTGACATCGCAGAGGCT
GTGGATATTGCAAGTGCAGCCAAGCACTTTGACTTGAACTTGAGGCAGTTTGGACCCTAC
AGGCTGAATTACTCTCGAACAGGGAGGCACCTGGCTTTGGGAGGGCGACGGGGTCATGTG
GCCGCCCTCGACTGGGTGACAAAGAAGCTTATGTGCGAGATCAACGTCATGGAGGCGGTG
CGGGACATCCGGTTTCTGCACTCAGAGGCACTGCTT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|55626408|ref|XP_518401.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55626408|ref|XP_518401.1|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               128-283, gnl|bosTau2|chr23 (5826196-5826041)
               

               
               128-283, gnl|Hg17|chr6 (33364770-33364600)
               

               
               128-283, gnl|Mm7|chr17 (32018913-32019068)
               


               
               422-558, gnl|bosTau2|chr23 (5825677-5825542)
               

               
               422-558, gnl|Hg17|chr6 (33364227-33364092)
               

               
               422-558, gnl|Mm7|chr17 (32019434-32019569)
               


               
               685-793, gnl|bosTau2|chr23 (5824924-5824816)
               

               
               685-793, gnl|Hg17|chr6 (33363475-33363367)
               

               
               685-793, gnl|Mm7|chr17 (32021374-32021482)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               128-283, gnl|bosTau2|chr23 (5826196-5826041)
               

               
               128-283, gnl|Hg17|chr6 (33364770-33364600)
               

               
               128-283, gnl|Mm7|chr17 (32018913-32019068)
               


               
               422-558, gnl|bosTau2|chr23 (5825677-5825542)
               

               
               422-558, gnl|Hg17|chr6 (33364227-33364092)
               

               
               422-558, gnl|Mm7|chr17 (32019434-32019569)
               


               
               685-793, gnl|bosTau2|chr23 (5824924-5824816)
               

               
               685-793, gnl|Hg17|chr6 (33363475-33363367)
               

               
               685-793, gnl|Mm7|chr17 (32021374-32021482)

	128-283, gnl\|bosTau2\|chr23 (5826196-5826041)
	128-283, gnl\|Hg17\|chr6 (33364770-33364600)
	128-283, gnl\|Mm7\|chr17 (32018913-32019068)

	422-558, gnl\|bosTau2\|chr23 (5825677-5825542)
	422-558, gnl\|Hg17\|chr6 (33364227-33364092)
	422-558, gnl\|Mm7\|chr17 (32019434-32019569)

	685-793, gnl\|bosTau2\|chr23 (5824924-5824816)
	685-793, gnl\|Hg17\|chr6 (33363475-33363367)
	685-793, gnl\|Mm7\|chr17 (32021374-32021482)