Ss1.1-Ova1-OVR010038C01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCATTCCCTGCAGCCGATGCGCTGCTCTCGCTGCTTCATGTTACCTGGTCCCACTTGCC AGGAAGCAATGGCCGAAGTATCCTGCTGCCATCTATCCTCCTATGTCTAACTGAGAACTC TGTTTTAGTAAAATCAGGGCCCTGCTGGTGGACAGACTGTGTCCTCATTGATCACCATGC CGCCCTCTGCTTAATGCCGACACTAGGAAATATCCTAAAATGGGGGAGTCGAAGTGTTGC AAGAAAAGTGTCATTATTCTGCGATACCAAAAACCACTCCTCTGCTTTGAAATGCTTTCT TGGACAAGGAGCTAAAGGAGTGCTCAGGTCATGTATTTGTGGATTCCGTGCCCGAATTCT GCCTACCCGAGACGGAGCTAATAGATCTGTCTACGGTAGATGTGATCCTCATCTCTAACT ATCACTGCATGATGGCTCTGCCCTACATCACCGAGCACACCGGGTTCACAGGCACGGTGT ATGCCACTGAGCCCACCGTTCAGATCGGCAGGCTCCTCATGGAAGAGCTGGTGAACTTCA TTGAACGAGTTCCCAAGGCTCAGTCAGCCTCCTTGTGGAAGAACAAGGATATTCAGCGGC TGCTGCCTTCTCCTCTCAAGGATGCAGTAGAAGTATCGACGTGGAGAAGATGCTATACAA TGCAAGAGGTGAACTCTGCCCTCAGTAAAATCCAGATGGTGGGATATTCTCAGAAAATTG AACTTTTTGGTGCAGTCCAAGTGACTCCTCTAAGCTCTGGATATGCCCTTGGAAGCTCCA ACTGGATTATCCAATCCCATTATGAGAAAGTATCTTACGTCTCTGGATCCTCCTTGCTTA CCACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAATAGCGATGTTCTCATTCTGA CCGGTCTTACCCAGATTCCCACCGCGAACCCAGACGGTATGGTGGGAGAGTTCTGCAGCA ACCTGGCACTGACAGTCCGGAATGGAGGAAACGTGCTGGTCCCCTGCTACCCTTCTGGAG TGATCTACGACCTCCTGGAGTGCCTGTATCAGTACATTGACTCCGCCGGCCTCTCCAGCA TCCCCTTCTACTTCATCTCCCCCGTGGCTAACAGTTCACTTGAGTTTTCCCAGATTTTCG CTGAGTGGCTTTGTCACAACAAACAGACTAAGGTGTATCTCCCAGAACCACCTTTTCCTC ATGCAGAGCTCATCCAGACCAACAAGCTGAAGCACTACCCCAGCATCCACGGAGACTTCA GCAACGACTTCAGACAGCCATGTGTGGTGTTCACAGTCACCCGTCCCTCCGGTTTGGGGA TGTGGTCCATTTCATGGAACTCTGGGGAAAATCCAGTCTCATCACCGTCATATTTACAGA ACCTGACTTCTCATACCTGGAAGCATTGGCTCCCTACCAGCCCTTGGCCATGAAATGCAT ATACTGCCCCATTGATACACGACTGAATTTCATCCAAGTGTCAAAGCTGCTCAAAGAAGT GCAGCCCCTGCACGTGGTCTGCCCCGAGCAGTACACCCACCGCCCCAGCGCAGCCCACAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCATTCCCTGCAGCCGATGCGCTGCTCTCGCTGCTTCATGTTACCTGGTCCCACTTGCC AGGAAGCAATGGCCGAAGTATCCTGCTGCCATCTATCCTCCTATGTCTAACTGAGAACTC TGTTTTAGTAAAATCAGGGCCCTGCTGGTGGACAGACTGTGTCCTCATTGATCACCATGC CGCCCTCTGCTTAATGCCGACACTAGGAAATATCCTAAAATGGGGGAGTCGAAGTGTTGC AAGAAAAGTGTCATTATTCTGCGATACCAAAAACCACTCCTCTGCTTTGAAATGCTTTCT TGGACAAGGAGCTAAAGGAGTGCTCAGGTCATGTATTTGTGGATTCCGTGCCCGAATTCT GCCTACCCGAGACGGAGCTAATAGATCTGTCTACGGTAGATGTGATCCTCATCTCTAACT ATCACTGCATGATGGCTCTGCCCTACATCACCGAGCACACCGGGTTCACAGGCACGGTGT ATGCCACTGAGCCCACCGTTCAGATCGGCAGGCTCCTCATGGAAGAGCTGGTGAACTTCA TTGAACGAGTTCCCAAGGCTCAGTCAGCCTCCTTGTGGAAGAACAAGGATATTCAGCGGC TGCTGCCTTCTCCTCTCAAGGATGCAGTAGAAGTATCGACGTGGAGAAGATGCTATACAA TGCAAGAGGTGAACTCTGCCCTCAGTAAAATCCAGATGGTGGGATATTCTCAGAAAATTG AACTTTTTGGTGCAGTCCAAGTGACTCCTCTAAGCTCTGGATATGCCCTTGGAAGCTCCA ACTGGATTATCCAATCCCATTATGAGAAAGTATCTTACGTCTCTGGATCCTCCTTGCTTA CCACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAATAGCGATGTTCTCATTCTGA CCGGTCTTACCCAGATTCCCACCGCGAACCCAGACGGTATGGTGGGAGAGTTCTGCAGCA ACCTGGCACTGACAGTCCGGAATGGAGGAAACGTGCTGGTCCCCTGCTACCCTTCTGGAG TGATCTACGACCTCCTGGAGTGCCTGTATCAGTACATTGACTCCGCCGGCCTCTCCAGCA TCCCCTTCTACTTCATCTCCCCCGTGGCTAACAGTTCACTTGAGTTTTCCCAGATTTTCG CTGAGTGGCTTTGTCACAACAAACAGACTAAGGTGTATCTCCCAGAACCACCTTTTCCTC ATGCAGAGCTCATCCAGACCAACAAGCTGAAGCACTACCCCAGCATCCACGGAGACTTCA GCAACGACTTCAGACAGCCATGTGTGGTGTTCACAGTCACCCGTCCCTCCGGTTTGGGGA TGTGGTCCATTTCATGGAACTCTGGGGAAAATCCAGTCTCATCACCGTCATATTTACAGA ACCTGACTTCTCATACCTGGAAGCATTGGCTCCCTACCAGCCCTTGGCCATGAAATGCAT ATACTGCCCCATTGATACACGACTGAATTTCATCCAAGTGTCAAAGCTGCTCAAAGAAGT GCAGCCCCTGCACGTGGTCTGCCCCGAGCAGTACACCCACCGCCCCAGCGCAGCCCACAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 720-838, + strand, RNAz p=0.869072 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 720-838, + strand, RNAz p=0.869072 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC025267, + |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 720-854, gnl|bosTau2|chr8 (4744388-4744522) | |
| 720-854, gnl|Hg17|chr8 (28725897-28725763) | |
| 720-854, gnl|Mm7|chr14 (59867945-59868079) | |
| 963-1148, gnl|bosTau2|chr8 (4767366-4767551) | |
| 963-1148, gnl|canFam2|chr25 (31749792-31749564) | |
| 963-1148, gnl|danRer3|chrNA (213954775-213954972) | |
| 963-1148, gnl|dasNov1|scaffold_301773 (357-579) | |
| 963-1148, gnl|echTel1|scaffold_317004 (53964-53732) | |
| 963-1148, gnl|fr1|chrUn (173957178-173956976) | |
| 963-1148, gnl|galGal2|chr3 (104001088-104001291) | |
| 963-1148, gnl|hg17|chr8 (28707214-28707452) | |
| 963-1148, gnl|Hg17|chr8 (28707427-28707242) | |
| 963-1148, gnl|loxAfr1|scaffold_23628 (15583-15261) | |
| 963-1148, gnl|mm7|chr14 (59880446-59880220) | |
| 963-1148, gnl|Mm7|chr14 (59880236-59880421) | |
| 963-1148, gnl|monDom2|scaffold_1 (68888386-68888624) | |
| 963-1148, gnl|oryCun1|scaffold_184470 (8109-8359) | |
| 963-1148, gnl|panTro1|chr7 (29759941-29760175) | |
| 963-1148, gnl|rheMac2|chr8 (28949743-28949975) | |
| 963-1148, gnl|rn3|chr15 (44386066-44385836) | |
| 963-1148, gnl|tetNig1|chr14 (8852718-8852921) | |
| 1207-1379, gnl|bosTau2|chr8 (4777274-4777447) | |
| 1207-1379, gnl|Hg17|chr8 (28694432-28694259) | |
| 1207-1379, gnl|Mm7|chr14 (59888808-59888981) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 720-854, gnl|bosTau2|chr8 (4744388-4744522) | |
| 720-854, gnl|Hg17|chr8 (28725897-28725763) | |
| 720-854, gnl|Mm7|chr14 (59867945-59868079) | |
| 963-1148, gnl|bosTau2|chr8 (4767366-4767551) | |
| 963-1148, gnl|canFam2|chr25 (31749792-31749564) | |
| 963-1148, gnl|danRer3|chrNA (213954775-213954972) | |
| 963-1148, gnl|dasNov1|scaffold_301773 (357-579) | |
| 963-1148, gnl|echTel1|scaffold_317004 (53964-53732) | |
| 963-1148, gnl|fr1|chrUn (173957178-173956976) | |
| 963-1148, gnl|galGal2|chr3 (104001088-104001291) | |
| 963-1148, gnl|hg17|chr8 (28707214-28707452) | |
| 963-1148, gnl|Hg17|chr8 (28707427-28707242) | |
| 963-1148, gnl|loxAfr1|scaffold_23628 (15583-15261) | |
| 963-1148, gnl|mm7|chr14 (59880446-59880220) | |
| 963-1148, gnl|Mm7|chr14 (59880236-59880421) | |
| 963-1148, gnl|monDom2|scaffold_1 (68888386-68888624) | |
| 963-1148, gnl|oryCun1|scaffold_184470 (8109-8359) | |
| 963-1148, gnl|panTro1|chr7 (29759941-29760175) | |
| 963-1148, gnl|rheMac2|chr8 (28949743-28949975) | |
| 963-1148, gnl|rn3|chr15 (44386066-44385836) | |
| 963-1148, gnl|tetNig1|chr14 (8852718-8852921) | |
| 1207-1379, gnl|bosTau2|chr8 (4777274-4777447) | |
| 1207-1379, gnl|Hg17|chr8 (28694432-28694259) | |
| 1207-1379, gnl|Mm7|chr14 (59888808-59888981) |