Non-Coding RNA Search

Ss1.1-Ova1-OVR010047B09.5

Sequence:


               
               ACATTGTAAAACAAAATGCCCATCTCTAGAGTACCAGCATCATCTGAGGCAACAGGAGTC
CTAAATGTATATTTTGGGGCATTGTCTAACTTTTCTGCCCCTCTGATTTCCACAGGATTT
TATATTGCTTCCCCTGAGATCAAGCAAAGCAAGATGGTTTTGGAAATGCTGAACCCAATG
AACATCAGCAGCATGGTGTCTGAAGCTGTCCTTTTTGGCAGCATTGCAATCCTGCTGCTC
ATTGGCTTACTTCTCTGGGTTTGGAATTATGAGGACACATCCTCAATACCAGGTCCTGGC
TATTTTCTGGGAATTGGGCCCCTCATTTCCCACTTCAGGTTCCTCTGGATGGGGATTGGC
AGTGCCTGCAACTACTACAACAAAATGTATGGAGAATTCATGAGGGTCTGGATAGGTGGA
GAGGAAACACTCATTATTAGCAAGTCTTCAAGTATGTTCCACATAATGAAGCACAATCAT
TACACGTGCCGATTTGGCAGCAAACTTGGGTTGGAATGCATTGGCATGCATGAAAAAGGC
ATCATGTTTAACAATAATCCAGCCCTCTGGAAAGCTGTTCGACCTTTCTTTACAAAAGCT
CTGTCCGGCCCTGGCCTGGTGCGCATGGTGACCATCTGTGCCGATTCCATCACCAAGCAC
CTGGACAAGCTGGAGGAGGTCCGCAATGACTTGGGCTACGTGGACGTGTTGACCCTCATG
CGGCGCATCATGCTGGACACCTCTNACAACCTCTTCCTGGGGATCCCACTGGACGAAAGT
GCCCTCGTGCATAAAGTCCAGGGTTATTTTGATGCATGGCAAGCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATTGTAAAACAAAATGCCCATCTCTAGAGTACCAGCATCATCTGAGGCAACAGGAGTC
CTAAATGTATATTTTGGGGCATTGTCTAACTTTTCTGCCCCTCTGATTTCCACAGGATTT
TATATTGCTTCCCCTGAGATCAAGCAAAGCAAGATGGTTTTGGAAATGCTGAACCCAATG
AACATCAGCAGCATGGTGTCTGAAGCTGTCCTTTTTGGCAGCATTGCAATCCTGCTGCTC
ATTGGCTTACTTCTCTGGGTTTGGAATTATGAGGACACATCCTCAATACCAGGTCCTGGC
TATTTTCTGGGAATTGGGCCCCTCATTTCCCACTTCAGGTTCCTCTGGATGGGGATTGGC
AGTGCCTGCAACTACTACAACAAAATGTATGGAGAATTCATGAGGGTCTGGATAGGTGGA
GAGGAAACACTCATTATTAGCAAGTCTTCAAGTATGTTCCACATAATGAAGCACAATCAT
TACACGTGCCGATTTGGCAGCAAACTTGGGTTGGAATGCATTGGCATGCATGAAAAAGGC
ATCATGTTTAACAATAATCCAGCCCTCTGGAAAGCTGTTCGACCTTTCTTTACAAAAGCT
CTGTCCGGCCCTGGCCTGGTGCGCATGGTGACCATCTGTGCCGATTCCATCACCAAGCAC
CTGGACAAGCTGGAGGAGGTCCGCAATGACTTGGGCTACGTGGACGTGTTGACCCTCATG
CGGCGCATCATGCTGGACACCTCTNACAACCTCTTCCTGGGGATCCCACTGGACGAAAGT
GCCCTCGTGCATAAAGTCCAGGGTTATTTTGATGCATGGCAAGCTCTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|23272705|gb|AAH35714.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|23272705|gb|AAH35714.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               3-294, gnl|bosTau2|chr10 (41639132-41639427)
               

               
               3-294, gnl|Hg17|chr15 (49322551-49322255)
               

               
               3-294, gnl|Mm7|chr9 (54224181-54223884)
               


               
               597-773, gnl|bosTau2|chr10 (41531224-41531048)
               

               
               597-773, gnl|Hg17|chr15 (49302016-49301840)
               

               
               597-773, gnl|Mm7|chr9 (54207283-54207107)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-294, gnl|bosTau2|chr10 (41639132-41639427)
               

               
               3-294, gnl|Hg17|chr15 (49322551-49322255)
               

               
               3-294, gnl|Mm7|chr9 (54224181-54223884)
               


               
               597-773, gnl|bosTau2|chr10 (41531224-41531048)
               

               
               597-773, gnl|Hg17|chr15 (49302016-49301840)
               

               
               597-773, gnl|Mm7|chr9 (54207283-54207107)

	3-294, gnl\|bosTau2\|chr10 (41639132-41639427)
	3-294, gnl\|Hg17\|chr15 (49322551-49322255)
	3-294, gnl\|Mm7\|chr9 (54224181-54223884)

	597-773, gnl\|bosTau2\|chr10 (41531224-41531048)
	597-773, gnl\|Hg17\|chr15 (49302016-49301840)
	597-773, gnl\|Mm7\|chr9 (54207283-54207107)