Non-Coding RNA Search

Ss1.1-Ova1-OVRM10002C05.5

Sequence:


               
               GCCTACTGGTTTAAAGCAGTGTCTGTTGTTTATCAGGCATGTATACTTGGAATAATGTGT
TTTTGTAACACATTCCGCCACCTAAAAAGGGATTCTTTTTTTTTTTTTAATTTTCAAATA
CAGGTGTTATGCAAGTTTATCAATTCTAGTTTCTGTTTATCCTTATGCCATTATCCAAAC
TATTTAACATGTGAGTAAAAACCAACATGATCTTCCTTCAGGACAGGTAGGACTTCAGAA
GTGTCTTTACACTTTTGAGTTTTCTTTCAAGATGTCAAGAAGAGGCTGGCCATATTGTTT
AAGAACCCTGAG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAAAAGCATCTTGACTTTGGAGTCATTCAGAC
CTGGGGTCCAGCCCCCCTGCAACCTTGCTGAACCAACTTGCTTAGCTACCAAATGGAAAT
ACCATCTCCACGGAAGTCTCTATGAAGATGAAAGGAGGGTGTTTCTAAAGATGGGAATAC
ATAGAGGGAGCTGTCTGAGAAAGTGGTAGACAGTGTCTCAGAAAGTGGTATTTGCAGTTG
TTATAGTTACGGAAAACGCTGAAAACAGGCCTCAGTGGCTACTTCTTGTAGATGGTGATT
TATGCTCACCTTCCGCACAGAGGAAAGAAATGATTTACTTGCCTTTCATAGTTGTCACTC
GGTTGATCCAGGCCTGCCATGCTTACAGCATGGGGCTCATGAATCATGGATCAACACAAA
TGTTAGCCAGCTAAGAGGGAGTTTAGTTGGAGTAGCCCATGTCAAGATAAGGTCTCTGAT
TTAATGTGCAATTTCTAAAAACCAGCCAGCATTTAACTGGCCTTATCCCTGCTGAGATAA
GATCTCCAAAGAGCTGCTTTGCAATTTTCGTAATTGGGAGAGGATAATGCCTATAATTTC
CAATTACTATTGATCTGACGGCTGCTTTGGTCTGGGGTGAAACCCCTTTGTCTCGGCACA
ATTTCCTCAGCTGTAGCGGGTACAGTCCAGCTTCAAGTGAGGCTTGGGGCTGTGTTGGGT
CTACTCTGGAGAGATCAGTGGGCAGGGGAGAGCCGGTGAACACCTTAGAGCTTCCTTCCA
TCCTGCTGGTGTGTCCTCTCTCGTTCTCTTTTTAATTTTTTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTACTGGTTTAAAGCAGTGTCTGTTGTTTATCAGGCATGTATACTTGGAATAATGTGT
TTTTGTAACACATTCCGCCACCTAAAAAGGGATTCTTTTTTTTTTTTTAATTTTCAAATA
CAGGTGTTATGCAAGTTTATCAATTCTAGTTTCTGTTTATCCTTATGCCATTATCCAAAC
TATTTAACATGTGAGTAAAAACCAACATGATCTTCCTTCAGGACAGGTAGGACTTCAGAA
GTGTCTTTACACTTTTGAGTTTTCTTTCAAGATGTCAAGAAGAGGCTGGCCATATTGTTT
AAGAACCCTGAG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAAAAGCATCTTGACTTTGGAGTCATTCAGAC
CTGGGGTCCAGCCCCCCTGCAACCTTGCTGAACCAACTTGCTTAGCTACCAAATGGAAAT
ACCATCTCCACGGAAGTCTCTATGAAGATGAAAGGAGGGTGTTTCTAAAGATGGGAATAC
ATAGAGGGAGCTGTCTGAGAAAGTGGTAGACAGTGTCTCAGAAAGTGGTATTTGCAGTTG
TTATAGTTACGGAAAACGCTGAAAACAGGCCTCAGTGGCTACTTCTTGTAGATGGTGATT
TATGCTCACCTTCCGCACAGAGGAAAGAAATGATTTACTTGCCTTTCATAGTTGTCACTC
GGTTGATCCAGGCCTGCCATGCTTACAGCATGGGGCTCATGAATCATGGATCAACACAAA
TGTTAGCCAGCTAAGAGGGAGTTTAGTTGGAGTAGCCCATGTCAAGATAAGGTCTCTGAT
TTAATGTGCAATTTCTAAAAACCAGCCAGCATTTAACTGGCCTTATCCCTGCTGAGATAA
GATCTCCAAAGAGCTGCTTTGCAATTTTCGTAATTGGGAGAGGATAATGCCTATAATTTC
CAATTACTATTGATCTGACGGCTGCTTTGGTCTGGGGTGAAACCCCTTTGTCTCGGCACA
ATTTCCTCAGCTGTAGCGGGTACAGTCCAGCTTCAAGTGAGGCTTGGGGCTGTGTTGGGT
CTACTCTGGAGAGATCAGTGGGCAGGGGAGAGCCGGTGAACACCTTAGAGCTTCCTTCCA
TCCTGCTGGTGTGTCCTCTCTCGTTCTCTTTTTAATTTTTTTTTTTTT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               14-311, gnl|bosTau2|chr2 (60025765-60026069)
               

               
               14-311, gnl|Hg17|chr8 (119150184-119149627)
               


               
               320-974, gnl|bosTau2|chr2 (60026059-60026698)
               

               
               320-974, gnl|Hg17|chr8 (119149637-119148970)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-311, gnl|bosTau2|chr2 (60025765-60026069)
               

               
               14-311, gnl|Hg17|chr8 (119150184-119149627)
               


               
               320-974, gnl|bosTau2|chr2 (60026059-60026698)
               

               
               320-974, gnl|Hg17|chr8 (119149637-119148970)

	14-311, gnl\|bosTau2\|chr2 (60025765-60026069)
	14-311, gnl\|Hg17\|chr8 (119150184-119149627)

	320-974, gnl\|bosTau2\|chr2 (60026059-60026698)
	320-974, gnl\|Hg17\|chr8 (119149637-119148970)