Non-Coding RNA Search

Ss1.1-Ova1-OVRM10004A01.5

Sequence:


               
               AAACTTAAAAAGAAGGAAGCGTTTCATTGGTCTAGCCCAGCCATCTCACCTTGCAGGTGG
GGAAGCTGAGGCGCCATCTGGAGCCTTTGGGCAGGCGGTCTGCAGGGAGTCGGTGAGAAG
AGGGCTGGGGCTCATTTGGTGCCTGCAGGTGTGGCAGAGTGCCAAGCACAGGGGACTCTT
GCCGCTTCTGCCCCCAGCAGACCCCCTCATTTCTTCTGAGATGTCCTGGCCTACCTGCCC
CCAGATGGCCAAGGACCAAGTGTTTGCCAGGCGCTGTCCTTACAGAGTGTGGGACCTCGA
GTAAATCACAAAATTCTCTGCCAGCCTCCCCAGTGAGCTCGAGCGGCTCTGGAGGGGTGA
TGAGTGAAAAGGAGCTTTGCCCACCGGGCACAGACCCTGGTGGATGGTTACGACAACTCC
TAATGTGACTCTGGTAGCGAGCTCAGCTCTGAGACTCGTGGGGTCAAAGCAGTGCACTTC
CTCTTGGAAGGGGACCACAGCGTGGCGTGCGAGGGAGGCCTCGCTGCAGAGACTGCGGGT
GGCTGGCCGGGGCCTTGGCTCTCCTGGGGCAAGGCCGGGGGGCGGAAGCGGAGGGAACCA
ACTGCGCCAGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACTTAAAAAGAAGGAAGCGTTTCATTGGTCTAGCCCAGCCATCTCACCTTGCAGGTGG
GGAAGCTGAGGCGCCATCTGGAGCCTTTGGGCAGGCGGTCTGCAGGGAGTCGGTGAGAAG
AGGGCTGGGGCTCATTTGGTGCCTGCAGGTGTGGCAGAGTGCCAAGCACAGGGGACTCTT
GCCGCTTCTGCCCCCAGCAGACCCCCTCATTTCTTCTGAGATGTCCTGGCCTACCTGCCC
CCAGATGGCCAAGGACCAAGTGTTTGCCAGGCGCTGTCCTTACAGAGTGTGGGACCTCGA
GTAAATCACAAAATTCTCTGCCAGCCTCCCCAGTGAGCTCGAGCGGCTCTGGAGGGGTGA
TGAGTGAAAAGGAGCTTTGCCCACCGGGCACAGACCCTGGTGGATGGTTACGACAACTCC
TAATGTGACTCTGGTAGCGAGCTCAGCTCTGAGACTCGTGGGGTCAAAGCAGTGCACTTC
CTCTTGGAAGGGGACCACAGCGTGGCGTGCGAGGGAGGCCTCGCTGCAGAGACTGCGGGT
GGCTGGCCGGGGCCTTGGCTCTCCTGGGGCAAGGCCGGGGGGCGGAAGCGGAGGGAACCA
ACTGCGCCAGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               135-273, - strand, RNAz p=0.994418

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               135-273, - strand, RNAz p=0.994418

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               99-569, gnl|bosTau2|chr11 (54001380-54000909)
               

               
               99-569, gnl|Hg17|chr2 (25418687-25418148)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               99-569, gnl|bosTau2|chr11 (54001380-54000909)
               

               
               99-569, gnl|Hg17|chr2 (25418687-25418148)

	99-569, gnl\|bosTau2\|chr11 (54001380-54000909)
	99-569, gnl\|Hg17\|chr2 (25418687-25418148)