Non-Coding RNA Search

Ss1.1-Ova1-OVRM10004C08.5

Sequence:


               
               AGCGCGGGCCAGCGGGTTGAGCTGTGCACTGCGTGGGGGCGCACTGTTCCGGGGACCCGG
GCCCCGCCACCTCCTCTCCGCCCCCCGGGCTCTGTTCTTACTTTGGAGCTGTGGGAGGAC
GGGCAGCGAGAGCCATGCAGTCGGAATCGGGGATTGTGCCGGATTTCGAAGTCGGGGAGG
AGTTTCACGAAGAGCCCAAAACCTATTACGAACTCAAAAGTCAGCCCCTGAAGAGCAGGT
GAGTGGTGACAGCTGGAGGGAGGCGCGGCGGGCGGCTGGGGGACCCCGCGCCTCCCACCC
TGAGGCGAGGGAAGCCGGTCTCTAGGGCTCTGGGACAAGGACCCCGTGCCCTTGCCACTG
GGCAGAGGGCGAACTGACCCCCGCAGTTGGGGGCCGCGCTTGCCCAGCCGGTGCGCTAAC
GGGGGTCTCTGCCCGAGCGCACTCTGGGGGCGCAGTGGGCAGCCCAGGAACGCTTGCGCA
GTTGGGGGGACCCTCGGTTGGGGATACCAGCTGTCGAGACCGGGTGGGGGTTGGGGAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCGCGGGCCAGCGGGTTGAGCTGTGCACTGCGTGGGGGCGCACTGTTCCGGGGACCCGG
GCCCCGCCACCTCCTCTCCGCCCCCCGGGCTCTGTTCTTACTTTGGAGCTGTGGGAGGAC
GGGCAGCGAGAGCCATGCAGTCGGAATCGGGGATTGTGCCGGATTTCGAAGTCGGGGAGG
AGTTTCACGAAGAGCCCAAAACCTATTACGAACTCAAAAGTCAGCCCCTGAAGAGCAGGT
GAGTGGTGACAGCTGGAGGGAGGCGCGGCGGGCGGCTGGGGGACCCCGCGCCTCCCACCC
TGAGGCGAGGGAAGCCGGTCTCTAGGGCTCTGGGACAAGGACCCCGTGCCCTTGCCACTG
GGCAGAGGGCGAACTGACCCCCGCAGTTGGGGGCCGCGCTTGCCCAGCCGGTGCGCTAAC
GGGGGTCTCTGCCCGAGCGCACTCTGGGGGCGCAGTGGGCAGCCCAGGAACGCTTGCGCA
GTTGGGGGGACCCTCGGTTGGGGATACCAGCTGTCGAGACCGGGTGGGGGTTGGGGAGCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|7684299|dbj|BAA95206.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|7684299|dbj|BAA95206.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               321-438, - strand, RNAz p=0.991163

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               321-438, - strand, RNAz p=0.991163

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-538, gnl|bosTau2|chr22 (25151753-25152289)
               

               
               2-538, gnl|Hg17|chr3 (69871307-69871846)
               

               
               2-538, gnl|Mm7|chr6 (97895140-97895668)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-538, gnl|bosTau2|chr22 (25151753-25152289)
               

               
               2-538, gnl|Hg17|chr3 (69871307-69871846)
               

               
               2-538, gnl|Mm7|chr6 (97895140-97895668)

	2-538, gnl\|bosTau2\|chr22 (25151753-25152289)
	2-538, gnl\|Hg17\|chr3 (69871307-69871846)
	2-538, gnl\|Mm7\|chr6 (97895140-97895668)