Ss1.1-Ova1-OVRM10012G03.5
|
TCATCCGCATCCCCCTCAGTCGCTGCGAGCGGTACGGATCCTGTAAAAAGTCTTGTATTG
CATCTCGAGACCCATACTGTGGCTGGTTAAGCCAGGGGGCCTGTGGTCGAGTGATGCCGG
GGATGCTCGCTGGAGGATTTGAGCAGGACACGGAATTTGGCAACACGGCCCATCTAGGGG
ACTGCCACGAAATTTTGCCTACTTCAACTACACCAGATTACAAAATATTTGGCGGTCCAA
CATCTGACATGGAGGTATCTTCATCTTCTGTTACCACAATGGCAAGTATCCCAGAAATTA
CACCTAAAGTGATTGATACCTGGAGACCTAAACTGACCAGCTCCCGGAAATTTGTAGTTC
AAGATGACCCAAACACTTCTGATTTTACTGATCCTTTATCAGGTATCCCAAAGGGTGTAC
GATGGGAAGTCCAATCTGGAGACTCCAACCAGATGGTCCACATGAATGTCCTCATCACCT
GTGTCTTTGCGGCTTTTGTTTTGGGTGCATTCATTGCAGGTGTGGCAGTATACTGCTATC
GGGACATGTTTGTTCGGAAGAACAGAAAGATCCATAAAGATGCAGAATCTGCCCAGTCGT
GCACAGACTCCAGTGGAAGCTTTGCCAAGCTGAATGGTCTCTTTGACAGCCCAGTCAAGG
AATATCAACAGAATATTGATTCTCCCAAATTGTACAGTAACCTGCTGACCAGTCGGAAAG
AGCTGCCGCCCAATGGGGAAACAAAATCCATGGTCATGGACCATCGAGGCCAACCTCCTG
AGTTGGCTGCTCTCCCTACACCTGAGTCCACACCTGTGCTTCACCAGAAGACCTTGCAGG
CCATGAAGAGCCACTCAGACAAGGCCCACGGCCATGGGGCTTCGAGGAAAGAAACTTCCC
AGTTTTTTCCTTCTAGTCCTCCACCCCACTCCCCACTAAGTCATGGGCACATCCCCAGTG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCATCCGCATCCCCCTCAGTCGCTGCGAGCGGTACGGATCCTGTAAAAAGTCTTGTATTG
CATCTCGAGACCCATACTGTGGCTGGTTAAGCCAGGGGGCCTGTGGTCGAGTGATGCCGG
GGATGCTCGCTGGAGGATTTGAGCAGGACACGGAATTTGGCAACACGGCCCATCTAGGGG
ACTGCCACGAAATTTTGCCTACTTCAACTACACCAGATTACAAAATATTTGGCGGTCCAA
CATCTGACATGGAGGTATCTTCATCTTCTGTTACCACAATGGCAAGTATCCCAGAAATTA
CACCTAAAGTGATTGATACCTGGAGACCTAAACTGACCAGCTCCCGGAAATTTGTAGTTC
AAGATGACCCAAACACTTCTGATTTTACTGATCCTTTATCAGGTATCCCAAAGGGTGTAC
GATGGGAAGTCCAATCTGGAGACTCCAACCAGATGGTCCACATGAATGTCCTCATCACCT
GTGTCTTTGCGGCTTTTGTTTTGGGTGCATTCATTGCAGGTGTGGCAGTATACTGCTATC
GGGACATGTTTGTTCGGAAGAACAGAAAGATCCATAAAGATGCAGAATCTGCCCAGTCGT
GCACAGACTCCAGTGGAAGCTTTGCCAAGCTGAATGGTCTCTTTGACAGCCCAGTCAAGG
AATATCAACAGAATATTGATTCTCCCAAATTGTACAGTAACCTGCTGACCAGTCGGAAAG
AGCTGCCGCCCAATGGGGAAACAAAATCCATGGTCATGGACCATCGAGGCCAACCTCCTG
AGTTGGCTGCTCTCCCTACACCTGAGTCCACACCTGTGCTTCACCAGAAGACCTTGCAGG
CCATGAAGAGCCACTCAGACAAGGCCCACGGCCATGGGGCTTCGAGGAAAGAAACTTCCC
AGTTTTTTCCTTCTAGTCCTCCACCCCACTCCCCACTAAGTCATGGGCACATCCCCAGTG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
218-416, gnl|bosTau2|chr10 (43496103-43495907) |
|
218-416, gnl|canFam2|chr30 (17044096-17044347) |
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218-416, gnl|danRer3|chr18 (43251029-43250801) |
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218-416, gnl|echTel1|scaffold_316074 (30429-30178) |
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218-416, gnl|fr1|chrUn (65186480-65186219) |
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218-416, gnl|galGal2|chr10 (10472551-10472798) |
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218-416, gnl|hg17|chr15 (45848036-45848287) |
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218-416, gnl|Hg17|chr15 (45848043-45848239) |
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218-416, gnl|mm7|chr2 (124403023-124403274) |
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218-416, gnl|Mm7|chr2 (124403030-124403226) |
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218-416, gnl|monDom2|scaffold_12 (22356479-22356226) |
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218-416, gnl|oryCun1|scaffold_208847 (82531-82781) |
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218-416, gnl|panTro1|chr16 (45820679-45820930) |
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218-416, gnl|rheMac2|chr7 (26086538-26086788) |
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218-416, gnl|rn3|chr3 (111848408-111848659) |
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218-416, gnl|tetNig1|chr5 (10014805-10015035) |
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218-416, gnl|xenTro1|scaffold_27 (2424113-2424356) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
218-416, gnl|bosTau2|chr10 (43496103-43495907) |
|
218-416, gnl|canFam2|chr30 (17044096-17044347) |
|
218-416, gnl|danRer3|chr18 (43251029-43250801) |
|
218-416, gnl|echTel1|scaffold_316074 (30429-30178) |
|
218-416, gnl|fr1|chrUn (65186480-65186219) |
|
218-416, gnl|galGal2|chr10 (10472551-10472798) |
|
218-416, gnl|hg17|chr15 (45848036-45848287) |
|
218-416, gnl|Hg17|chr15 (45848043-45848239) |
|
218-416, gnl|mm7|chr2 (124403023-124403274) |
|
218-416, gnl|Mm7|chr2 (124403030-124403226) |
|
218-416, gnl|monDom2|scaffold_12 (22356479-22356226) |
|
218-416, gnl|oryCun1|scaffold_208847 (82531-82781) |
|
218-416, gnl|panTro1|chr16 (45820679-45820930) |
|
218-416, gnl|rheMac2|chr7 (26086538-26086788) |
|
218-416, gnl|rn3|chr3 (111848408-111848659) |
|
218-416, gnl|tetNig1|chr5 (10014805-10015035) |
|
218-416, gnl|xenTro1|scaffold_27 (2424113-2424356) |
