Non-Coding RNA Search

Ss1.1-Ova1-OVRM10017D05.5

Sequence:


               
               AACTCTTGGCCCTGCTTCCTGACTGGTGTTCACTGGTCTTCCCAGCCGGATGGGGTTGGG
TGAGACGGTTTGCGCCGTGGGGTCTGGTGGGGCTTGGGTTACTGTCACCTCTGATTTTCC
TGCCCTTACAGATCCACCTCTTATCTTCTCTTCCACGGGGAAGTCAGCGCCACACTCTGC
TCCGGGCTCGGGCAGTCCTGACAGCGTGGCGAAGCTGAAGCTCCAGGGTTCCCCAGTCCC
CAGCCTGCGCCAGAGTCTGCTCTGGGGGGAGCCTGCTGGACCCCCCAGCCCCCCTCCGGA
TCCTCCACCTAGCCGGGGGCCCTTACCCCTGGAGCCCATTTGCCGGGGACCGGATGGGCG
CTTTGTGATGGAACCAAACGTGGGGAGCCCCCAAGAAAGATTGGGCTCTGAGCAGGCCGA
GCCTTGGACCCCAGCCCGGCGCCAGGCTAGGTCCTATGATTGCAGCAGCAGCAGCCCCAG
CGGGATGCCACAGCCCCTCTGCATTGCAGATATCAGCCCTGTGGGACCCCCTCCCGCAGC
CCCACCCAGTCCCTTGCCAGGGCCAGGACCCCTGCTTCAGTACCTGAGCCTCCCCTTCTT
CCGGGAGATGAATGTAGATGGGGACTGGCCCCCCTTGGAGGAACCCAGGCCTATTCCACC
CCCAGATTACATGGATACCCGGCCCTGTGCCCCCTCATCTCTCCTCCGCCCCCTGGACTC
CCCTTCTGAGTCCCCCAGGGTTGTGCTTCCTGGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTCTTGGCCCTGCTTCCTGACTGGTGTTCACTGGTCTTCCCAGCCGGATGGGGTTGGG
TGAGACGGTTTGCGCCGTGGGGTCTGGTGGGGCTTGGGTTACTGTCACCTCTGATTTTCC
TGCCCTTACAGATCCACCTCTTATCTTCTCTTCCACGGGGAAGTCAGCGCCACACTCTGC
TCCGGGCTCGGGCAGTCCTGACAGCGTGGCGAAGCTGAAGCTCCAGGGTTCCCCAGTCCC
CAGCCTGCGCCAGAGTCTGCTCTGGGGGGAGCCTGCTGGACCCCCCAGCCCCCCTCCGGA
TCCTCCACCTAGCCGGGGGCCCTTACCCCTGGAGCCCATTTGCCGGGGACCGGATGGGCG
CTTTGTGATGGAACCAAACGTGGGGAGCCCCCAAGAAAGATTGGGCTCTGAGCAGGCCGA
GCCTTGGACCCCAGCCCGGCGCCAGGCTAGGTCCTATGATTGCAGCAGCAGCAGCCCCAG
CGGGATGCCACAGCCCCTCTGCATTGCAGATATCAGCCCTGTGGGACCCCCTCCCGCAGC
CCCACCCAGTCCCTTGCCAGGGCCAGGACCCCTGCTTCAGTACCTGAGCCTCCCCTTCTT
CCGGGAGATGAATGTAGATGGGGACTGGCCCCCCTTGGAGGAACCCAGGCCTATTCCACC
CCCAGATTACATGGATACCCGGCCCTGTGCCCCCTCATCTCTCCTCCGCCCCCTGGACTC
CCCTTCTGAGTCCCCCAGGGTTGTGCTTCCTGGGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               175-333, - strand, RNAz p=0.904041

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               175-333, - strand, RNAz p=0.904041

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               175-755, gnl|bosTau2|chr3 (5770288-5770868)
               

               
               175-755, gnl|Hg17|chr1 (156711881-156711301)
               

               
               175-755, gnl|Mm7|chr1 (172467059-172467639)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               175-755, gnl|bosTau2|chr3 (5770288-5770868)
               

               
               175-755, gnl|Hg17|chr1 (156711881-156711301)
               

               
               175-755, gnl|Mm7|chr1 (172467059-172467639)

	175-755, gnl\|bosTau2\|chr3 (5770288-5770868)
	175-755, gnl\|Hg17\|chr1 (156711881-156711301)
	175-755, gnl\|Mm7\|chr1 (172467059-172467639)