Non-Coding RNA Search

Ss1.1-Ova1-OVRM10034C11.5

Sequence:


               
               CAGGGATAGAACCCACACCACAGCAGCGACCCAGAACTGCTGCAGTGACAGTGCCAGATC
TCTAACCCATTGCTCCCACAAGAGAACTCCCCAGTGAAACTTTTTAAAGCACATTGTGTC
CTCAGGTTCCCAAGGTCATCACTGATCTGATGTATTTACAGAGATAATGTGTTAATGGAC
CCTCCTTCCTCTCTCAGGTAACATGCATTTAGCAGTGGCCTTCTGGAGACAGCGCCTTAA
CCCCAAGAAGTGACTCAAACGGTGAAAATTTCAGGTATTGTGGCATGCCTGTGAGAGAGA
TTAGGGACAGTGATGATGCAGAGGGTGAGCCCTGATCATATTAATGGGTATGGGGAGGTA
TGGGGAGAGACCATTGTTGATGTTGGCTACATGAATTGGTTCGAGAAAGAGATGGTTTCC
ACTTGGATCTGAAACCATAAGCTGCCTCTCTACAAGGCTTAGCCTGTGAGCCACATTGTA
CTCTCTTTTTTTTTTTTTCCGGTGCTTCCTAGGGCCGCACTCACAGCACGTGGAGGTTCC
CACGCTAGGGGTCAAATCAGAGCTACAGCTGCTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGGATAGAACCCACACCACAGCAGCGACCCAGAACTGCTGCAGTGACAGTGCCAGATC
TCTAACCCATTGCTCCCACAAGAGAACTCCCCAGTGAAACTTTTTAAAGCACATTGTGTC
CTCAGGTTCCCAAGGTCATCACTGATCTGATGTATTTACAGAGATAATGTGTTAATGGAC
CCTCCTTCCTCTCTCAGGTAACATGCATTTAGCAGTGGCCTTCTGGAGACAGCGCCTTAA
CCCCAAGAAGTGACTCAAACGGTGAAAATTTCAGGTATTGTGGCATGCCTGTGAGAGAGA
TTAGGGACAGTGATGATGCAGAGGGTGAGCCCTGATCATATTAATGGGTATGGGGAGGTA
TGGGGAGAGACCATTGTTGATGTTGGCTACATGAATTGGTTCGAGAAAGAGATGGTTTCC
ACTTGGATCTGAAACCATAAGCTGCCTCTCTACAAGGCTTAGCCTGTGAGCCACATTGTA
CTCTCTTTTTTTTTTTTTCCGGTGCTTCCTAGGGCCGCACTCACAGCACGTGGAGGTTCC
CACGCTAGGGGTCAAATCAGAGCTACAGCTGCTGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               366-484, - strand, RNAz p=0.672154

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               366-484, - strand, RNAz p=0.672154

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               71-484, gnl|bosTau2|chr13 (47620364-47619950)
               

               
               71-484, gnl|Hg17|chr20 (32420412-32421132)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               71-484, gnl|bosTau2|chr13 (47620364-47619950)
               

               
               71-484, gnl|Hg17|chr20 (32420412-32421132)

	71-484, gnl\|bosTau2\|chr13 (47620364-47619950)
	71-484, gnl\|Hg17\|chr20 (32420412-32421132)