Ss1.1-Ova1-OVRM10054D01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAAATTGTCATCTTCAGTGAACTTCTCAGGAAGGGATCCCTCACCCCAGGCTACATGTT CAAGAAGAGCATCAAGATGAATTACTTGGTCCTGGAGGAGAACGTGGAAAATGACCCCTG CAAGTTTGCGCTCATGAACAGGGAGACTTCGGAGAGGGTCATCCTGCAAGCCGCCAACGC TGACATCCGGCAGGCCTGGGTGAAGGACATCAGTCAAGTCTTAGAAACACAGCGAGACTT CTTAAACGCCCTACAGTCGCCCATCGAGTATCAGAGGAAAGAAAGGAGCACAGCCGTGAT GAGGTCCCAGCCTGCCAGGGTTCCCCAGGCCAGCCCCTGGCCCTACTCCTCCATCCCCGT GGGCTCTGAGAAGCCCCCAAAGGGCTCCAGCTATAACCCGTCTCTGCCACCCCTGAAGAT ATCTACCTCCAATGGCAGTCCGGGCTTTGACTACCACCAGGCTGGGGACAAGTTTGAGCC CAGCAAGAGCGACCTGGGAGGCTGCAATGGGGCCTCATCCATGGCCGTGATCAAAGATTA CTATGCACTGAAGGAGAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCAGGTCCTTGC CGTCAACCAGCAGAATATGTGCCTGGTGTACCAGCCCGCCAGTGACCACTCCCCCGCCGC CGAGGGCTGGGTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACGGCAGCCGCAGA AAATAGTGACGGGAGCATCAAGAAGTCATGTTCATGGCATACTCTACGCATGAGAAAGCG GGCAGAAGTGGAGAACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATAT TCTGGGCAACAAAGTCTCTGTTAAAGTGAGTAAGGGATTCCGGAGCTGTGTCCGACCTCT CATCTACTCCCACCCTGCAGCATTCTCACGAGGCAACTTGGGTGGATGGGACCAGAAGGG AAGTAGTTTAGCAGGATTTTGCATGCGAGATCAATTTATTTTTTATTTTTTATTTCTCCT GGCAACTTCGATTCAAATAAGTAAGTATCTCTTTTTTTTTCTTTTATACCCTCCTCCTTA TATAATGCAGATGTTTTATAGCAAAATTATCTGCAGTATTATTTATTTTCTTAGAAATGC AAGATGCTTGGTTCATACTAAAGTTCTCAGAGCCACCCATTCAGTCTCCTAGGTTTGAAA ATACATGCAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAAATTGTCATCTTCAGTGAACTTCTCAGGAAGGGATCCCTCACCCCAGGCTACATGTT CAAGAAGAGCATCAAGATGAATTACTTGGTCCTGGAGGAGAACGTGGAAAATGACCCCTG CAAGTTTGCGCTCATGAACAGGGAGACTTCGGAGAGGGTCATCCTGCAAGCCGCCAACGC TGACATCCGGCAGGCCTGGGTGAAGGACATCAGTCAAGTCTTAGAAACACAGCGAGACTT CTTAAACGCCCTACAGTCGCCCATCGAGTATCAGAGGAAAGAAAGGAGCACAGCCGTGAT GAGGTCCCAGCCTGCCAGGGTTCCCCAGGCCAGCCCCTGGCCCTACTCCTCCATCCCCGT GGGCTCTGAGAAGCCCCCAAAGGGCTCCAGCTATAACCCGTCTCTGCCACCCCTGAAGAT ATCTACCTCCAATGGCAGTCCGGGCTTTGACTACCACCAGGCTGGGGACAAGTTTGAGCC CAGCAAGAGCGACCTGGGAGGCTGCAATGGGGCCTCATCCATGGCCGTGATCAAAGATTA CTATGCACTGAAGGAGAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCAGGTCCTTGC CGTCAACCAGCAGAATATGTGCCTGGTGTACCAGCCCGCCAGTGACCACTCCCCCGCCGC CGAGGGCTGGGTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACGGCAGCCGCAGA AAATAGTGACGGGAGCATCAAGAAGTCATGTTCATGGCATACTCTACGCATGAGAAAGCG GGCAGAAGTGGAGAACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATAT TCTGGGCAACAAAGTCTCTGTTAAAGTGAGTAAGGGATTCCGGAGCTGTGTCCGACCTCT CATCTACTCCCACCCTGCAGCATTCTCACGAGGCAACTTGGGTGGATGGGACCAGAAGGG AAGTAGTTTAGCAGGATTTTGCATGCGAGATCAATTTATTTTTTATTTTTTATTTCTCCT GGCAACTTCGATTCAAATAAGTAAGTATCTCTTTTTTTTTCTTTTATACCCTCCTCCTTA TATAATGCAGATGTTTTATAGCAAAATTATCTGCAGTATTATTTATTTTCTTAGAAATGC AAGATGCTTGGTTCATACTAAAGTTCTCAGAGCCACCCATTCAGTCTCCTAGGTTTGAAA ATACATGCAGGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 327-487, - strand, RNAz p=0.972279 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 327-487, - strand, RNAz p=0.972279 |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 72-246, gnl|bosTau2|chr1 (38512718-38512544) | |
| 72-246, gnl|canFam2|chr33 (30741472-30741658) | |
| 72-246, gnl|danRer3|chr6 (24410500-24410324) | |
| 72-246, gnl|dasNov1|scaffold_69446 (4777-4587) | |
| 72-246, gnl|echTel1|scaffold_241128 (3296-3110) | |
| 72-246, gnl|fr1|chrUn (40548513-40548327) | |
| 72-246, gnl|galGal2|chr7 (28523550-28523736) | |
| 72-246, gnl|hg17|chr3 (125868540-125868726) | |
| 72-246, gnl|Hg17|chr3 (125868544-125868718) | |
| 72-246, gnl|loxAfr1|scaffold_20204 (57439-57625) | |
| 72-246, gnl|mm7|chr16 (33703683-33703497) | |
| 72-246, gnl|Mm7|chr16 (33703677-33703503) | |
| 72-246, gnl|monDom2|scaffold_24 (23405699-23405885) | |
| 72-246, gnl|oryCun1|scaffold_200272 (66528-66714) | |
| 72-246, gnl|panTro1|chr2 (127695160-127695346) | |
| 72-246, gnl|rheMac2|chr2 (44667195-44667381) | |
| 72-246, gnl|rn3|chr11 (68626399-68626585) | |
| 72-246, gnl|tetNig1|chr2 (17146117-17145938) | |
| 72-246, gnl|xenTro1|scaffold_398 (419077-419260) | |
| 248-487, gnl|bosTau2|chr1 (38508970-38508731) | |
| 248-487, gnl|Hg17|chr3 (125873196-125873435) | |
| 248-487, gnl|Mm7|chr16 (33692179-33691940) | |
| 514-707, gnl|bosTau2|chr20 (34798751-34798944) | |
| 514-707, gnl|canFam2|chr34 (3290799-3290498) | |
| 514-707, gnl|danRer3|chr19 (58471928-58472224) | |
| 514-707, gnl|dasNov1|scaffold_36191 (1307-1610) | |
| 514-707, gnl|echTel1|scaffold_302638 (47278-47576) | |
| 514-707, gnl|fr1|chrUn (787714-787992) | |
| 514-707, gnl|galGal2|chr2 (76287447-76287126) | |
| 514-707, gnl|hg17|chr5 (14545629-14545935) | |
| 514-707, gnl|Hg17|chr5 (14545702-14545895) | |
| 514-707, gnl|loxAfr1|scaffold_17300 (35838-36135) | |
| 514-707, gnl|mm7|chr15 (27847370-27847071) | |
| 514-707, gnl|Mm7|chr15 (27847298-27847105) | |
| 514-707, gnl|monDom2|scaffold_4 (36411809-36412100) | |
| 514-707, gnl|oryCun1|scaffold_195912 (152654-152955) | |
| 514-707, gnl|panTro1|chr4 (14962921-14963227) | |
| 514-707, gnl|rheMac2|chr6 (14674884-14675190) | |
| 514-707, gnl|rn3|chr2 (79592032-79591733) | |
| 514-707, gnl|tetNig1|chr8 (4006248-4005963) | |
| 514-707, gnl|xenTro1|scaffold_4 (3438995-3439295) | |
| 736-1209, gnl|bosTau2|chr1 (38503154-38502679) | |
| 736-1209, gnl|Hg17|chr3 (125879721-125880207) | |
| 736-1209, gnl|Mm7|chr16 (33686199-33685737) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 72-246, gnl|bosTau2|chr1 (38512718-38512544) | |
| 72-246, gnl|canFam2|chr33 (30741472-30741658) | |
| 72-246, gnl|danRer3|chr6 (24410500-24410324) | |
| 72-246, gnl|dasNov1|scaffold_69446 (4777-4587) | |
| 72-246, gnl|echTel1|scaffold_241128 (3296-3110) | |
| 72-246, gnl|fr1|chrUn (40548513-40548327) | |
| 72-246, gnl|galGal2|chr7 (28523550-28523736) | |
| 72-246, gnl|hg17|chr3 (125868540-125868726) | |
| 72-246, gnl|Hg17|chr3 (125868544-125868718) | |
| 72-246, gnl|loxAfr1|scaffold_20204 (57439-57625) | |
| 72-246, gnl|mm7|chr16 (33703683-33703497) | |
| 72-246, gnl|Mm7|chr16 (33703677-33703503) | |
| 72-246, gnl|monDom2|scaffold_24 (23405699-23405885) | |
| 72-246, gnl|oryCun1|scaffold_200272 (66528-66714) | |
| 72-246, gnl|panTro1|chr2 (127695160-127695346) | |
| 72-246, gnl|rheMac2|chr2 (44667195-44667381) | |
| 72-246, gnl|rn3|chr11 (68626399-68626585) | |
| 72-246, gnl|tetNig1|chr2 (17146117-17145938) | |
| 72-246, gnl|xenTro1|scaffold_398 (419077-419260) | |
| 248-487, gnl|bosTau2|chr1 (38508970-38508731) | |
| 248-487, gnl|Hg17|chr3 (125873196-125873435) | |
| 248-487, gnl|Mm7|chr16 (33692179-33691940) | |
| 514-707, gnl|bosTau2|chr20 (34798751-34798944) | |
| 514-707, gnl|canFam2|chr34 (3290799-3290498) | |
| 514-707, gnl|danRer3|chr19 (58471928-58472224) | |
| 514-707, gnl|dasNov1|scaffold_36191 (1307-1610) | |
| 514-707, gnl|echTel1|scaffold_302638 (47278-47576) | |
| 514-707, gnl|fr1|chrUn (787714-787992) | |
| 514-707, gnl|galGal2|chr2 (76287447-76287126) | |
| 514-707, gnl|hg17|chr5 (14545629-14545935) | |
| 514-707, gnl|Hg17|chr5 (14545702-14545895) | |
| 514-707, gnl|loxAfr1|scaffold_17300 (35838-36135) | |
| 514-707, gnl|mm7|chr15 (27847370-27847071) | |
| 514-707, gnl|Mm7|chr15 (27847298-27847105) | |
| 514-707, gnl|monDom2|scaffold_4 (36411809-36412100) | |
| 514-707, gnl|oryCun1|scaffold_195912 (152654-152955) | |
| 514-707, gnl|panTro1|chr4 (14962921-14963227) | |
| 514-707, gnl|rheMac2|chr6 (14674884-14675190) | |
| 514-707, gnl|rn3|chr2 (79592032-79591733) | |
| 514-707, gnl|tetNig1|chr8 (4006248-4005963) | |
| 514-707, gnl|xenTro1|scaffold_4 (3438995-3439295) | |
| 736-1209, gnl|bosTau2|chr1 (38503154-38502679) | |
| 736-1209, gnl|Hg17|chr3 (125879721-125880207) | |
| 736-1209, gnl|Mm7|chr16 (33686199-33685737) |