Ss1.1-Ova1-OVRM10058C02.5
|
ATTGCCGCTGGTGGCAGGAGGCTGCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAG
GCCCACGGTAGCGCAGCCGCTCTGAGTAGCTCTTCATGGAGGAACACGGAGTGAGCCAGA
CTGAACACATGGCTACCATAGAAGCGCATGCAGTGGCCCAGCAAGTACAGCAGGTCCATG
TGGCCACCTACACTGAACACAGTATGTTGAGTGCTGATGAAGACTCTCCTTCATCTCCTG
AAGACACCTCTTATGATGATTCAGACATACTCAACTCTACAGCAGCTGATGAGGTAACAG
CCCATCTGGCTGCCGCAGGACCTGTGGGAATGGCTGCTGCTGCTGCTGTGGCAACAGGAA
AGAAACGGAAACGGCCTCATGTGTTTGAGTCTAATCCATCAATCCGGAAGAGACAGCAAA
CACGTTTGCTTAGGAAACTTCGAGCCACGTTAGATGAATATACTACTCGAGTGGGACAAC
AAGCTATTGTCCTTTGTATCTCACCCTCCAAACCCAACCCTGTCTTTAAGGTGTTTGGTG
CAGCACCTTTGGAGAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACCTGGAGT
CGGCCCTGGCAGAACACGCCCCTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATTGCCGCTGGTGGCAGGAGGCTGCGAGGAGCCGGCGCGGTCGCAGTCTCCACGGCGCAG
GCCCACGGTAGCGCAGCCGCTCTGAGTAGCTCTTCATGGAGGAACACGGAGTGAGCCAGA
CTGAACACATGGCTACCATAGAAGCGCATGCAGTGGCCCAGCAAGTACAGCAGGTCCATG
TGGCCACCTACACTGAACACAGTATGTTGAGTGCTGATGAAGACTCTCCTTCATCTCCTG
AAGACACCTCTTATGATGATTCAGACATACTCAACTCTACAGCAGCTGATGAGGTAACAG
CCCATCTGGCTGCCGCAGGACCTGTGGGAATGGCTGCTGCTGCTGCTGTGGCAACAGGAA
AGAAACGGAAACGGCCTCATGTGTTTGAGTCTAATCCATCAATCCGGAAGAGACAGCAAA
CACGTTTGCTTAGGAAACTTCGAGCCACGTTAGATGAATATACTACTCGAGTGGGACAAC
AAGCTATTGTCCTTTGTATCTCACCCTCCAAACCCAACCCTGTCTTTAAGGTGTTTGGTG
CAGCACCTTTGGAGAATGTGGTGCGTAAGTACAAGAGCATGATCCTGGAAGACCTGGAGT
CGGCCCTGGCAGAACACGCCCCTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
85-333, gnl|bosTau2|chr4 (49392247-49391998) |
|
85-333, gnl|Hg17|chr7 (128891132-128891384) |
|
85-333, gnl|Mm7|chr6 (30022059-30022308) |
| |
|
432-562, gnl|bosTau2|chr4 (49378827-49378697) |
|
432-562, gnl|canFam2|chr14 (10112991-10112851) |
|
432-562, gnl|danRer3|chr4 (16953560-16953694) |
|
432-562, gnl|dasNov1|scaffold_35526 (6092-6235) |
|
432-562, gnl|echTel1|scaffold_210279 (7811-7952) |
|
432-562, gnl|fr1|chrUn (180840713-180840578) |
|
432-562, gnl|galGal2|chr14 (14706089-14706230) |
|
432-562, gnl|hg17|chr7 (128911415-128911556) |
|
432-562, gnl|Hg17|chr7 (128911421-128911551) |
|
432-562, gnl|mm7|chr6 (30030589-30030728) |
|
432-562, gnl|Mm7|chr6 (30030593-30030723) |
|
432-562, gnl|monDom2|scaffold_22 (14886934-14886791) |
|
432-562, gnl|oryCun1|scaffold_175859 (8054-8195) |
|
432-562, gnl|panTro1|chr6 (131312019-131312160) |
|
432-562, gnl|rheMac2|chr3 (167040628-167040769) |
|
432-562, gnl|rn3|chr4 (57279551-57279690) |
|
432-562, gnl|tetNig1|chr19 (2967798-2967935) |
|
432-562, gnl|xenTro1|scaffold_20 (2908014-2907873) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
85-333, gnl|bosTau2|chr4 (49392247-49391998) |
|
85-333, gnl|Hg17|chr7 (128891132-128891384) |
|
85-333, gnl|Mm7|chr6 (30022059-30022308) |
| |
|
432-562, gnl|bosTau2|chr4 (49378827-49378697) |
|
432-562, gnl|canFam2|chr14 (10112991-10112851) |
|
432-562, gnl|danRer3|chr4 (16953560-16953694) |
|
432-562, gnl|dasNov1|scaffold_35526 (6092-6235) |
|
432-562, gnl|echTel1|scaffold_210279 (7811-7952) |
|
432-562, gnl|fr1|chrUn (180840713-180840578) |
|
432-562, gnl|galGal2|chr14 (14706089-14706230) |
|
432-562, gnl|hg17|chr7 (128911415-128911556) |
|
432-562, gnl|Hg17|chr7 (128911421-128911551) |
|
432-562, gnl|mm7|chr6 (30030589-30030728) |
|
432-562, gnl|Mm7|chr6 (30030593-30030723) |
|
432-562, gnl|monDom2|scaffold_22 (14886934-14886791) |
|
432-562, gnl|oryCun1|scaffold_175859 (8054-8195) |
|
432-562, gnl|panTro1|chr6 (131312019-131312160) |
|
432-562, gnl|rheMac2|chr3 (167040628-167040769) |
|
432-562, gnl|rn3|chr4 (57279551-57279690) |
|
432-562, gnl|tetNig1|chr19 (2967798-2967935) |
|
432-562, gnl|xenTro1|scaffold_20 (2908014-2907873) |
