Ss1.1-Ova1-OVRM10063D08.5
|
ATTTTAGAATGTCTTGGGTGCTAAAAAAAAAAAAAAAAATTATTTACCACTCCACAAAAT
CAATCTGGCTCCCTTGTAATTTAACAGTTTAGGTTTTTCTTTAGAAGTCAGTGGCAATTA
TTAAATATAAACTTTTTTGAGATTAAATGAAAAACCTTTAGCATCTTTCTGCCTCAAAGA
AGTTCAAGTTCCTTAATCTGGTATTCACTCTCTTGCTCTAAATTATTATTTTCAACTAAG
CCCCCACTCTTATATAATAAACCCAACTTTCCAATCAATTATATCTACTCATTTTTCTCT
GCAGTCGTGCCTTGTTCTCTCCTATCCACATACCTTTGCCTGCTCCATTAAGTAGGATTC
AGAACACCAGTTTTGATTCTTGGGGTTACTGATACTGCCCTCAAACCTATTAGCTAATTA
ATATCAGTCTGCTTTGTTGCAATGAGGGTGACATGACCTTGCAAAGCTCCAGGTTGATTG
TTAGACAACTGTTGCCCACCTTACCCTCTTTTGCTTGCTGCTTGCTTTACTGGGGCGTAT
GTGATCAATGACTTAGAAGCAAATTTAGGACTGATTTTACATACTGTTCCAAAAGACCAA
CCTTAATTCCATTGGATAAGAATGCTCTAAGCAAGCTCCTTGCTCATATCCCTTTGTCCT
ACTTAGAATATGTATGCATGTGTATCATTTGGAGGTTAAGTGCNTAAGTTTAACTACTAT
GTTTTAAAGCATTATTATATTGTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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ATTTTAGAATGTCTTGGGTGCTAAAAAAAAAAAAAAAAATTATTTACCACTCCACAAAAT
CAATCTGGCTCCCTTGTAATTTAACAGTTTAGGTTTTTCTTTAGAAGTCAGTGGCAATTA
TTAAATATAAACTTTTTTGAGATTAAATGAAAAACCTTTAGCATCTTTCTGCCTCAAAGA
AGTTCAAGTTCCTTAATCTGGTATTCACTCTCTTGCTCTAAATTATTATTTTCAACTAAG
CCCCCACTCTTATATAATAAACCCAACTTTCCAATCAATTATATCTACTCATTTTTCTCT
GCAGTCGTGCCTTGTTCTCTCCTATCCACATACCTTTGCCTGCTCCATTAAGTAGGATTC
AGAACACCAGTTTTGATTCTTGGGGTTACTGATACTGCCCTCAAACCTATTAGCTAATTA
ATATCAGTCTGCTTTGTTGCAATGAGGGTGACATGACCTTGCAAAGCTCCAGGTTGATTG
TTAGACAACTGTTGCCCACCTTACCCTCTTTTGCTTGCTGCTTGCTTTACTGGGGCGTAT
GTGATCAATGACTTAGAAGCAAATTTAGGACTGATTTTACATACTGTTCCAAAAGACCAA
CCTTAATTCCATTGGATAAGAATGCTCTAAGCAAGCTCCTTGCTCATATCCCTTTGTCCT
ACTTAGAATATGTATGCATGTGTATCATTTGGAGGTTAAGTGCNTAAGTTTAACTACTAT
GTTTTAAAGCATTATTATATTGTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
244-743, gnl|bosTau2|chr20 (7335784-7335274) |
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244-743, gnl|canFam2|chr2 (57100749-57101089) |
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244-743, gnl|hg17|chr5 (68445269-68445675) |
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244-743, gnl|Hg17|chr5 (68445268-68445762) |
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244-743, gnl|loxAfr1|scaffold_27770 (13094-13479) |
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244-743, gnl|mm7|chr13 (97923425-97923053) |
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244-743, gnl|oryCun1|scaffold_204322 (41707-42080) |
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244-743, gnl|panTro1|chr4 (47435707-47435301) |
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244-743, gnl|rheMac2|chr6 (66966652-66967057) |
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244-743, gnl|rn3|chr2 (31541124-31540776) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
244-743, gnl|bosTau2|chr20 (7335784-7335274) |
|
244-743, gnl|canFam2|chr2 (57100749-57101089) |
|
244-743, gnl|hg17|chr5 (68445269-68445675) |
|
244-743, gnl|Hg17|chr5 (68445268-68445762) |
|
244-743, gnl|loxAfr1|scaffold_27770 (13094-13479) |
|
244-743, gnl|mm7|chr13 (97923425-97923053) |
|
244-743, gnl|oryCun1|scaffold_204322 (41707-42080) |
|
244-743, gnl|panTro1|chr4 (47435707-47435301) |
|
244-743, gnl|rheMac2|chr6 (66966652-66967057) |
|
244-743, gnl|rn3|chr2 (31541124-31540776) |
