Ss1.1-Ova1-OVRM10087A08.5
|
CTGCTGCACCTGGCCGCGGACCCCTACCCGGACGTCTCCGACCTGGCCATGAGGGTGCTC
AACAGCATCGCCTGCAAGGCCACAATGAACGCCCGGCCCCAGCGCATCCTCACCGCCTCC
TCGCTCACGCAGTCGGCACCCGCCAGCCCCACCAACAAGGGCATCCACATCCACCAGGCG
GGAGGCTCCCCGCCGACGTCCAGCACCAGCAGCTCCAGCCTGACCAACGACGTGGCCAAG
CAGCCGGTCAGCCGAGACCTGCCGCCAGGCCGGCCGGGCGCCGCGGGCCCTGTGGGGGTG
CAGTACACGCCCCACTCCCACCAGTTCCCCCGCACACGCAAGATGTTCGACAAGGGCCCG
GACCAGACTGCCGACGACCCGGACGACACTGCGGGGCACAAGAGCTTCATCTCGGCCACG
ATGCAGACGGGCTTCTGCGACTGGAGCGCGCGGTACTTTGCCCAGCCCGTCATGAAGATC
CCGGAAGAGCACGACCTGGAGAGTCAGATCCGCAAGGAGCGCGAGTGGCGGTTTCTGCGG
AACACGCGCGTCCGGAAGCAGGCGCAGCAGCTCATC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGCTGCACCTGGCCGCGGACCCCTACCCGGACGTCTCCGACCTGGCCATGAGGGTGCTC
AACAGCATCGCCTGCAAGGCCACAATGAACGCCCGGCCCCAGCGCATCCTCACCGCCTCC
TCGCTCACGCAGTCGGCACCCGCCAGCCCCACCAACAAGGGCATCCACATCCACCAGGCG
GGAGGCTCCCCGCCGACGTCCAGCACCAGCAGCTCCAGCCTGACCAACGACGTGGCCAAG
CAGCCGGTCAGCCGAGACCTGCCGCCAGGCCGGCCGGGCGCCGCGGGCCCTGTGGGGGTG
CAGTACACGCCCCACTCCCACCAGTTCCCCCGCACACGCAAGATGTTCGACAAGGGCCCG
GACCAGACTGCCGACGACCCGGACGACACTGCGGGGCACAAGAGCTTCATCTCGGCCACG
ATGCAGACGGGCTTCTGCGACTGGAGCGCGCGGTACTTTGCCCAGCCCGTCATGAAGATC
CCGGAAGAGCACGACCTGGAGAGTCAGATCCGCAAGGAGCGCGAGTGGCGGTTTCTGCGG
AACACGCGCGTCCGGAAGCAGGCGCAGCAGCTCATC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
182-366, gnl|bosTau2|chr19 (44700628-44700812) |
|
182-366, gnl|canFam2|chr9 (4034344-4034133) |
|
182-366, gnl|danRer3|chr14 (50042176-50042389) |
|
182-366, gnl|dasNov1|scaffold_89819 (5333-5129) |
|
182-366, gnl|echTel1|scaffold_249630 (2525-2319) |
|
182-366, gnl|galGal2|chr3_random (306419-306200) |
|
182-366, gnl|hg17|chr17 (76511866-76512085) |
|
182-366, gnl|Hg17|chr17 (76511884-76512068) |
|
182-366, gnl|loxAfr1|scaffold_53572 (9077-9286) |
|
182-366, gnl|mm7|chr11 (119981242-119981461) |
|
182-366, gnl|Mm7|chr11 (119981260-119981444) |
|
182-366, gnl|monDom2|scaffold_18 (12343247-12343472) |
|
182-366, gnl|oryCun1|scaffold_172387 (10954-10739) |
|
182-366, gnl|panTro1|chr19 (80226116-80226335) |
|
182-366, gnl|rheMac2|chr16 (76373208-76373427) |
|
182-366, gnl|rn3|chr10 (109291409-109291628) |
|
182-366, gnl|tetNig1|chrUn_random (27086008-27086208) |
|
182-366, gnl|xenTro1|scaffold_413 (400022-399796) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
182-366, gnl|bosTau2|chr19 (44700628-44700812) |
|
182-366, gnl|canFam2|chr9 (4034344-4034133) |
|
182-366, gnl|danRer3|chr14 (50042176-50042389) |
|
182-366, gnl|dasNov1|scaffold_89819 (5333-5129) |
|
182-366, gnl|echTel1|scaffold_249630 (2525-2319) |
|
182-366, gnl|galGal2|chr3_random (306419-306200) |
|
182-366, gnl|hg17|chr17 (76511866-76512085) |
|
182-366, gnl|Hg17|chr17 (76511884-76512068) |
|
182-366, gnl|loxAfr1|scaffold_53572 (9077-9286) |
|
182-366, gnl|mm7|chr11 (119981242-119981461) |
|
182-366, gnl|Mm7|chr11 (119981260-119981444) |
|
182-366, gnl|monDom2|scaffold_18 (12343247-12343472) |
|
182-366, gnl|oryCun1|scaffold_172387 (10954-10739) |
|
182-366, gnl|panTro1|chr19 (80226116-80226335) |
|
182-366, gnl|rheMac2|chr16 (76373208-76373427) |
|
182-366, gnl|rn3|chr10 (109291409-109291628) |
|
182-366, gnl|tetNig1|chrUn_random (27086008-27086208) |
|
182-366, gnl|xenTro1|scaffold_413 (400022-399796) |
