Non-Coding RNA Search

Ss1.1-Ova1-OVRM10088F12.5

Sequence:


               
               TTCTCAAATTAATAAAAGCCTGGTGGCAGGGATGGGTGTGGAGAGGGGTAGGGGTGTACC
GTGGATGGGAGGGCCTGGTTGAGGTGACCCTGGAGATGAGGCGTGAAGGAAGTAAGGGAG
CCATGGAGGCATTTGAGTGAGTGTGCCACAGGTGGGGGGGCACAGCCAGTGCAAAGGCCC
TGGGGCTGGAATGGCCCTGAGTGTAGGGAGCAGAGCGTGGAGGCCGCAGGGAGTGCTGGA
GGGGGAGGTGAGGCCCGCTGAGTAGCCACTGGGCTTCGCTTGGTGATGGTGAAGCCAGGA
GCAGGTGAGCCTGGCCTTCCTCTCCTGCCTTACACTTGAGAAGGAGCCTGGAGGAAGCAG
GGCCCAGAGAGGGAAGCCGTCTGCCCAGCCCCGAAGCTCAGCCAGGCTTCCCTGCCCCCT
CTGGCGGCCTGAGAAACCTGAGGCGCCGGCGGGCACCATGCCAGGGCGAGCGGGGGAGGG
GCTGCCAGGCCCGCCCGCTCCGGCAGCTGCCTACCCGCCCTGAGCCGCCAGCCCAGATGG
CGCCCATCTGCTGACGCTGCCGTGGGCTGGCCTCCCGTTCCCGCCTCCTGTTCCCGCCTT
GTTCGGCGCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTCAAATTAATAAAAGCCTGGTGGCAGGGATGGGTGTGGAGAGGGGTAGGGGTGTACC
GTGGATGGGAGGGCCTGGTTGAGGTGACCCTGGAGATGAGGCGTGAAGGAAGTAAGGGAG
CCATGGAGGCATTTGAGTGAGTGTGCCACAGGTGGGGGGGCACAGCCAGTGCAAAGGCCC
TGGGGCTGGAATGGCCCTGAGTGTAGGGAGCAGAGCGTGGAGGCCGCAGGGAGTGCTGGA
GGGGGAGGTGAGGCCCGCTGAGTAGCCACTGGGCTTCGCTTGGTGATGGTGAAGCCAGGA
GCAGGTGAGCCTGGCCTTCCTCTCCTGCCTTACACTTGAGAAGGAGCCTGGAGGAAGCAG
GGCCCAGAGAGGGAAGCCGTCTGCCCAGCCCCGAAGCTCAGCCAGGCTTCCCTGCCCCCT
CTGGCGGCCTGAGAAACCTGAGGCGCCGGCGGGCACCATGCCAGGGCGAGCGGGGGAGGG
GCTGCCAGGCCCGCCCGCTCCGGCAGCTGCCTACCCGCCCTGAGCCGCCAGCCCAGATGG
CGCCCATCTGCTGACGCTGCCGTGGGCTGGCCTCCCGTTCCCGCCTCCTGTTCCCGCCTT
GTTCGGCGCCAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               309-411, - strand, RNAz p=0.730874

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               309-411, - strand, RNAz p=0.730874

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               309-612, gnl|bosTau2|chr7 (16202257-16202557)
               

               
               309-612, gnl|Hg17|chr19 (3338813-3339120)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               309-612, gnl|bosTau2|chr7 (16202257-16202557)
               

               
               309-612, gnl|Hg17|chr19 (3338813-3339120)

	309-612, gnl\|bosTau2\|chr7 (16202257-16202557)
	309-612, gnl\|Hg17\|chr19 (3338813-3339120)