Ss1.1-Ova1-OVRM10089A11.5
|
AGATGCGCTCGCCCCAGCCAGGGGCTGCCGAACGCCTTTGCGTGGAGTCTCCCGGACGCC
CCAGCGAGGAGGCAGCGGCCGCACCGCGCTGGAGCAGAGCCCGAGGACTGTGCCCCCGGG
ATCCGGCGCTCAGAGAAGCCTCCTGAGCTGTCTGAGGATGATATCCGGCTGAAAAGCGAG
AGAGAGAACTATAGTGCCAACTCCCTGGAGCCTGCCACCAACTCTCTTCCTGCAGATCAC
AAAACCATGGAAATTGAGGTCTCTGTTACAGAATGTAAGAGTGTGCCCGGAATCACCTCC
ACTCCGCATTCCTTGGACCACCCCTCCCCTTTCTACTCGCCCCCCCACAATGGCCTCCTC
CCTGATCACCATGAATCTCTGGATAACGATGTGGCCAGAGAGATCCGATATCTAGACGAG
GTGCTGGAGGCCAACTGCTGTGATTCTGCTGTGGACGGAACTTACAACGGCACTTCCTCC
CCGGAGCCTGGAGCAGCCATCTTGGCAGGCAGCTCAAGCCCACCCGCGCACACGGCCCTC
CAGCCGGAGCCCACGGAGAGAGTGGCTGGCAGGCAGGCGCCACCTCACATTGAGCTCCAT
CAGAGCAACTCTGACACCATGGCAGAGGGTGGAAGGGCCAATGGCCACCCCCCCGAGCAG
CCCAGAGACCTGCCGGGCGACAGCCTCCAGATGCCCGTGAGCCCCAGCTCCTCCACCAGC
CACGGGGTTCCTCCCGAGATGGGGAGTTCACCCTCACCACGCTGAAGAAGGAAGCTAAGT
TCGAGCTGCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCTCTTCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AGATGCGCTCGCCCCAGCCAGGGGCTGCCGAACGCCTTTGCGTGGAGTCTCCCGGACGCC
CCAGCGAGGAGGCAGCGGCCGCACCGCGCTGGAGCAGAGCCCGAGGACTGTGCCCCCGGG
ATCCGGCGCTCAGAGAAGCCTCCTGAGCTGTCTGAGGATGATATCCGGCTGAAAAGCGAG
AGAGAGAACTATAGTGCCAACTCCCTGGAGCCTGCCACCAACTCTCTTCCTGCAGATCAC
AAAACCATGGAAATTGAGGTCTCTGTTACAGAATGTAAGAGTGTGCCCGGAATCACCTCC
ACTCCGCATTCCTTGGACCACCCCTCCCCTTTCTACTCGCCCCCCCACAATGGCCTCCTC
CCTGATCACCATGAATCTCTGGATAACGATGTGGCCAGAGAGATCCGATATCTAGACGAG
GTGCTGGAGGCCAACTGCTGTGATTCTGCTGTGGACGGAACTTACAACGGCACTTCCTCC
CCGGAGCCTGGAGCAGCCATCTTGGCAGGCAGCTCAAGCCCACCCGCGCACACGGCCCTC
CAGCCGGAGCCCACGGAGAGAGTGGCTGGCAGGCAGGCGCCACCTCACATTGAGCTCCAT
CAGAGCAACTCTGACACCATGGCAGAGGGTGGAAGGGCCAATGGCCACCCCCCCGAGCAG
CCCAGAGACCTGCCGGGCGACAGCCTCCAGATGCCCGTGAGCCCCAGCTCCTCCACCAGC
CACGGGGTTCCTCCCGAGATGGGGAGTTCACCCTCACCACGCTGAAGAAGGAAGCTAAGT
TCGAGCTGCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCTCTTCG
|
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gi|55632045|ref|XP_520181.1| |
Protein identifier
|
gi|55632045|ref|XP_520181.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
134-828, gnl|bosTau2|chr8 (53529771-53529076) |
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134-828, gnl|canFam2|chr11 (68169455-68170072) |
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134-828, gnl|danRer3|chr10 (62215-62721) |
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134-828, gnl|dasNov1|scaffold_36896 (3673-3092) |
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134-828, gnl|echTel1|scaffold_289465 (174078-173498) |
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134-828, gnl|galGal2|chrZ (31884603-31885167) |
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134-828, gnl|hg17|chr9 (109977926-109978506) |
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134-828, gnl|Hg17|chr9 (109977960-109978655) |
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134-828, gnl|loxAfr1|scaffold_12623 (42163-41583) |
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134-828, gnl|mm7|chr4 (57895915-57896495) |
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134-828, gnl|Mm7|chr4 (57895949-57896644) |
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134-828, gnl|monDom2|scaffold_19 (33594747-33595344) |
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134-828, gnl|oryCun1|scaffold_192172 (84542-83980) |
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134-828, gnl|panTro1|chr11 (94524663-94525243) |
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134-828, gnl|rheMac2|chr15 (26061000-26060420) |
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134-828, gnl|rn3|chr5 (75832316-75832896) |
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134-828, gnl|xenTro1|scaffold_196 (1381438-1380870) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
134-828, gnl|bosTau2|chr8 (53529771-53529076) |
|
134-828, gnl|canFam2|chr11 (68169455-68170072) |
|
134-828, gnl|danRer3|chr10 (62215-62721) |
|
134-828, gnl|dasNov1|scaffold_36896 (3673-3092) |
|
134-828, gnl|echTel1|scaffold_289465 (174078-173498) |
|
134-828, gnl|galGal2|chrZ (31884603-31885167) |
|
134-828, gnl|hg17|chr9 (109977926-109978506) |
|
134-828, gnl|Hg17|chr9 (109977960-109978655) |
|
134-828, gnl|loxAfr1|scaffold_12623 (42163-41583) |
|
134-828, gnl|mm7|chr4 (57895915-57896495) |
|
134-828, gnl|Mm7|chr4 (57895949-57896644) |
|
134-828, gnl|monDom2|scaffold_19 (33594747-33595344) |
|
134-828, gnl|oryCun1|scaffold_192172 (84542-83980) |
|
134-828, gnl|panTro1|chr11 (94524663-94525243) |
|
134-828, gnl|rheMac2|chr15 (26061000-26060420) |
|
134-828, gnl|rn3|chr5 (75832316-75832896) |
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134-828, gnl|xenTro1|scaffold_196 (1381438-1380870) |
