Ss1.1-Ova1-OVRM10092H09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGCGGCGCGAAGATGGCGGCGGCGGTGGCGAGGCCCGGGGCGTCGGAGGCACCCAGCT CGCTGCTGCTGGTGGTGGGCGGCGAGTGCGGGTCCCCGGGGCTGCTAGCCTATGTGCTGG AGGAGCTTGAACGAGGCATCCGGTCTTGGGACATTGACTCTGGCATCTGCAGCCTCAATG AGCAGCTCAAGGTCTTCGTGTCCCGGCACTCGGCCACCTTCTCCAACATTGTGAAAGGCC AGCGGAGCCTGCACCACCGTGGAGATACCCTGGAGACGCTGGTCCTTCTGAATCCATCAG ACAAATCCCTATGTGACGAGCTCCGGAATCTTCTTTTGGACCCTGCTTCTCACAAGCTGC TGGTGCTGGCTGGGCCATGCCTGGAGGAGACAGGGGAACTGCTGCTACAGACGGGGGGCT TCTCACCTCGCCACTTCCTCCAGGTCCTGGGGGACAAAGAGATCCGGGATCTCCTGGCCT CCACACCCCCACCTGTGGACCCGCCCAAGCTCACCATCACCTGTCCGACCTTCGGTGACT GGGCCCAGCTGGCAACTGAAGTGTCTGGCCTCCAGGGCGTGCTCCAGCTGCAGTTAAACC CTCCCGTGCACCTGCCGGCTTCCGAAGGCCTGCGTGAGCTCCTGGAGTATGTGGCTGAGT CGCTGGAGCTGCAGTCCCCCTTTGAGCTGCTCGAGCCTCCGGCCTCCGTGGGCTTCTTCC GGCTCGCCCGGCCCTGCTGCTACATCTTCTCTGGTGGCCTCGGGGATGCTGCCTTCTTCG CTGTCAACGGCTTCACCGTGCTGGTCAACGGGGGCTCTAACCCCAAGTCAAGCTTCTGGA AGCTGGTGCGGCACCTCGACCGGGTGGATGCCGTGCTGGTGACCCACGCGGGCGCCGACA GCCTCCCTGGCCTCAACAGTCTGCTGCGGCGCAAGCTGGCAGAGCGCGATGAGGCAGCTG CTGGCGGGGGCTCCGGGGACGACCGGCTGCGCAGGCTGATCTCCCCCAACCTGGGGGTTG TGTTTCTCAATGCCCGGGCGGCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGCGGCGCGAAGATGGCGGCGGCGGTGGCGAGGCCCGGGGCGTCGGAGGCACCCAGCT CGCTGCTGCTGGTGGTGGGCGGCGAGTGCGGGTCCCCGGGGCTGCTAGCCTATGTGCTGG AGGAGCTTGAACGAGGCATCCGGTCTTGGGACATTGACTCTGGCATCTGCAGCCTCAATG AGCAGCTCAAGGTCTTCGTGTCCCGGCACTCGGCCACCTTCTCCAACATTGTGAAAGGCC AGCGGAGCCTGCACCACCGTGGAGATACCCTGGAGACGCTGGTCCTTCTGAATCCATCAG ACAAATCCCTATGTGACGAGCTCCGGAATCTTCTTTTGGACCCTGCTTCTCACAAGCTGC TGGTGCTGGCTGGGCCATGCCTGGAGGAGACAGGGGAACTGCTGCTACAGACGGGGGGCT TCTCACCTCGCCACTTCCTCCAGGTCCTGGGGGACAAAGAGATCCGGGATCTCCTGGCCT CCACACCCCCACCTGTGGACCCGCCCAAGCTCACCATCACCTGTCCGACCTTCGGTGACT GGGCCCAGCTGGCAACTGAAGTGTCTGGCCTCCAGGGCGTGCTCCAGCTGCAGTTAAACC CTCCCGTGCACCTGCCGGCTTCCGAAGGCCTGCGTGAGCTCCTGGAGTATGTGGCTGAGT CGCTGGAGCTGCAGTCCCCCTTTGAGCTGCTCGAGCCTCCGGCCTCCGTGGGCTTCTTCC GGCTCGCCCGGCCCTGCTGCTACATCTTCTCTGGTGGCCTCGGGGATGCTGCCTTCTTCG CTGTCAACGGCTTCACCGTGCTGGTCAACGGGGGCTCTAACCCCAAGTCAAGCTTCTGGA AGCTGGTGCGGCACCTCGACCGGGTGGATGCCGTGCTGGTGACCCACGCGGGCGCCGACA GCCTCCCTGGCCTCAACAGTCTGCTGCGGCGCAAGCTGGCAGAGCGCGATGAGGCAGCTG CTGGCGGGGGCTCCGGGGACGACCGGCTGCGCAGGCTGATCTCCCCCAACCTGGGGGTTG TGTTTCTCAATGCCCGGGCGGCCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 624-716, + strand, RNAz p=0.558362 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 624-716, + strand, RNAz p=0.558362 |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 1-136, gnl|bosTau2|chr7 (4716479-4716344) | |
| 1-136, gnl|canFam2|chr20 (48164250-48163904) | |
| 1-136, gnl|hg17|chr19 (17691079-17691444) | |
| 1-136, gnl|Hg17|chr19 (17691298-17691430) | |
| 1-136, gnl|mm7|chr8 (69360302-69360636) | |
| 1-136, gnl|Mm7|chr8 (69360495-69360633) | |
| 1-136, gnl|panTro1|chr20 (18682183-18682548) | |
| 1-136, gnl|rheMac2|chr19 (17276009-17276374) | |
| 1-136, gnl|rn3|chr16 (19027323-19026987) | |
| 460-1042, gnl|bosTau2|chr7 (4711759-4711177) | |
| 460-1042, gnl|Hg17|chr19 (17697636-17698224) | |
| 460-1042, gnl|Mm7|chr8 (69367409-69367967) | |
| 585-1036, gnl|bosTau2|chr21 (34373600-34374056) | |
| 585-1036, gnl|Hg17|chr15 (41600928-41601384) | |
| 585-1036, gnl|Mm7|chr2 (121040232-121040688) | |
| 624-1032, gnl|bosTau2|chr20 (6403586-6403997) | |
| 624-1032, gnl|canFam2|chr2 (58115274-58116464) | |
| 624-1032, gnl|danRer3|chr5 (33732585-33733762) | |
| 624-1032, gnl|dasNov1|scaffold_9897 (67085-65893) | |
| 624-1032, gnl|echTel1|scaffold_317033 (8485-9678) | |
| 624-1032, gnl|fr1|chrUn (120237865-120239048) | |
| 624-1032, gnl|galGal2|chrZ (10978277-10979456) | |
| 624-1032, gnl|hg17|chr5 (71525431-71526621) | |
| 624-1032, gnl|Hg17|chr5 (71525608-71526019) | |
| 624-1032, gnl|loxAfr1|scaffold_7027 (30743-29553) | |
| 624-1032, gnl|mm7|chr13 (96505516-96504328) | |
| 624-1032, gnl|Mm7|chr13 (96505339-96504928) | |
| 624-1032, gnl|monDom2|scaffold_60 (5114665-5115855) | |
| 624-1032, gnl|oryCun1|scaffold_212205 (171976-173167) | |
| 624-1032, gnl|panTro1|chr4 (43936864-43935674) | |
| 624-1032, gnl|rheMac2|chr6 (68343941-68345132) | |
| 624-1032, gnl|rn3|chr2 (30349840-30348651) | |
| 624-1032, gnl|tetNig1|chr4 (2967502-2968668) | |
| 624-1032, gnl|xenTro1|scaffold_120 (648789-649962) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-136, gnl|bosTau2|chr7 (4716479-4716344) | |
| 1-136, gnl|canFam2|chr20 (48164250-48163904) | |
| 1-136, gnl|hg17|chr19 (17691079-17691444) | |
| 1-136, gnl|Hg17|chr19 (17691298-17691430) | |
| 1-136, gnl|mm7|chr8 (69360302-69360636) | |
| 1-136, gnl|Mm7|chr8 (69360495-69360633) | |
| 1-136, gnl|panTro1|chr20 (18682183-18682548) | |
| 1-136, gnl|rheMac2|chr19 (17276009-17276374) | |
| 1-136, gnl|rn3|chr16 (19027323-19026987) | |
| 460-1042, gnl|bosTau2|chr7 (4711759-4711177) | |
| 460-1042, gnl|Hg17|chr19 (17697636-17698224) | |
| 460-1042, gnl|Mm7|chr8 (69367409-69367967) | |
| 585-1036, gnl|bosTau2|chr21 (34373600-34374056) | |
| 585-1036, gnl|Hg17|chr15 (41600928-41601384) | |
| 585-1036, gnl|Mm7|chr2 (121040232-121040688) | |
| 624-1032, gnl|bosTau2|chr20 (6403586-6403997) | |
| 624-1032, gnl|canFam2|chr2 (58115274-58116464) | |
| 624-1032, gnl|danRer3|chr5 (33732585-33733762) | |
| 624-1032, gnl|dasNov1|scaffold_9897 (67085-65893) | |
| 624-1032, gnl|echTel1|scaffold_317033 (8485-9678) | |
| 624-1032, gnl|fr1|chrUn (120237865-120239048) | |
| 624-1032, gnl|galGal2|chrZ (10978277-10979456) | |
| 624-1032, gnl|hg17|chr5 (71525431-71526621) | |
| 624-1032, gnl|Hg17|chr5 (71525608-71526019) | |
| 624-1032, gnl|loxAfr1|scaffold_7027 (30743-29553) | |
| 624-1032, gnl|mm7|chr13 (96505516-96504328) | |
| 624-1032, gnl|Mm7|chr13 (96505339-96504928) | |
| 624-1032, gnl|monDom2|scaffold_60 (5114665-5115855) | |
| 624-1032, gnl|oryCun1|scaffold_212205 (171976-173167) | |
| 624-1032, gnl|panTro1|chr4 (43936864-43935674) | |
| 624-1032, gnl|rheMac2|chr6 (68343941-68345132) | |
| 624-1032, gnl|rn3|chr2 (30349840-30348651) | |
| 624-1032, gnl|tetNig1|chr4 (2967502-2968668) | |
| 624-1032, gnl|xenTro1|scaffold_120 (648789-649962) |