Ss1.1-Ova1-OVRM10095E06.5
               |  | CTTTGTAACTCCCTGAATTCCTGGACCGCTTAAGTTCACTAGAAACCTGTGCTTTTCAGG
CATTATGCAGACTGCATGCAAACGAAGTGATAAGGAAAAAAGGACAAACACGTTGGCTGC
CTTTGCTTGCATGGATGACCTACCGTACCACGTACC------------------------
------------------------------------------------------------
AGTGGGCCCTATATGACTGCACAGTTTGTATGACTATGAAGTTGACCCTGAGCTCAGTGT
TTCTCAAGGGGGGTTCTTCTGATACTTTGGATGAAACGATTCTTTATTGTGCCAGATATT
TAACATCCGTGGCCCCTGGGCACTACATGCCACTGTGATAAAAAAAAAAAAAATGCCCAC
ATACATCTCTAAATGCCCCAAAGAGGAGTTACTGCTCTCTACTGAACTCCTGGAGTGGAC
TCCACTGTCTGCGGCTGGGAACCATGATCATTACAGATCCAAGAAAGGTCATGTGCAATT
TTTGCTAGGAATTCTCAAGCAGAGCAAAATACAGAGTTGAGTTTAAAAGATTTCAAAATT
CTCATACCTGGAGGAGTAGAATTATGGTGACCTTTTTTTTTCAATTGTCAGAAAAATAAC
ACCACTTACATCGGTAGTGAAACAAATATCTGGAATGAATGTTTAAAGGGCATCAGTGAG
TTTTATGTGTCACATGCATGTAAGTGGTAGTTGACTCCATATAGATGACAGTCTAGAAAA
AGAGTGGAGTTCTTAACATGGCTCAACAGAAACAAATCTGACTGGCATCAGTGAGGACTC
AGGTTCGATCCCTGGCTTTGCCTAGTGGGTTGAGGATCTAGTGTTGCCATGAGCTGTGGT
------------------------------------------------------------
------------------------------------------------------------
AAAAGAAAAGAGTGAAAGACCCCAGAACAGCAAAGAGAACCATCTTACCTTCATTGTTTT
AATTAGCTGGTTTTAAGGAGCTGTGGTACATTTTTTTTTTTTTTTTTT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CTTTGTAACTCCCTGAATTCCTGGACCGCTTAAGTTCACTAGAAACCTGTGCTTTTCAGG
CATTATGCAGACTGCATGCAAACGAAGTGATAAGGAAAAAAGGACAAACACGTTGGCTGC
CTTTGCTTGCATGGATGACCTACCGTACCACGTACC------------------------
------------------------------------------------------------
AGTGGGCCCTATATGACTGCACAGTTTGTATGACTATGAAGTTGACCCTGAGCTCAGTGT
TTCTCAAGGGGGGTTCTTCTGATACTTTGGATGAAACGATTCTTTATTGTGCCAGATATT
TAACATCCGTGGCCCCTGGGCACTACATGCCACTGTGATAAAAAAAAAAAAAATGCCCAC
ATACATCTCTAAATGCCCCAAAGAGGAGTTACTGCTCTCTACTGAACTCCTGGAGTGGAC
TCCACTGTCTGCGGCTGGGAACCATGATCATTACAGATCCAAGAAAGGTCATGTGCAATT
TTTGCTAGGAATTCTCAAGCAGAGCAAAATACAGAGTTGAGTTTAAAAGATTTCAAAATT
CTCATACCTGGAGGAGTAGAATTATGGTGACCTTTTTTTTTCAATTGTCAGAAAAATAAC
ACCACTTACATCGGTAGTGAAACAAATATCTGGAATGAATGTTTAAAGGGCATCAGTGAG
TTTTATGTGTCACATGCATGTAAGTGGTAGTTGACTCCATATAGATGACAGTCTAGAAAA
AGAGTGGAGTTCTTAACATGGCTCAACAGAAACAAATCTGACTGGCATCAGTGAGGACTC
AGGTTCGATCCCTGGCTTTGCCTAGTGGGTTGAGGATCTAGTGTTGCCATGAGCTGTGGT
------------------------------------------------------------
------------------------------------------------------------
AAAAGAAAAGAGTGAAAGACCCCAGAACAGCAAAGAGAACCATCTTACCTTCATTGTTTT
AATTAGCTGGTTTTAAGGAGCTGTGGTACATTTTTTTTTTTTTTTTTT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map