Ss1.1-Ova1-OVRM10109H11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGCCCGCCTGGTGAGCCCTGTGGTTTACTCCCAGAACTCCGCCCACTGCATGACCTTC TGGTACCACATGTCTGGTTCCCACGTGGGCACGCTGCGGGTCAAGCTGCGCTACCAGAAG CCCGAGGAGTATGACCAGCTGGTCTGGATGGCCATCGGACACCAAGGGGACCACTGGAAA GGGGGGCGGGTCCTGCTCCACAAGTCTCTGAAACTTTACCAGGTGATTTTTGAGGGGGAG ATCGGAAAAGGCAGCCTTGGCGGGATTGCCGTGGACGACATCAGCATCAGTAACCACATT CCTCAGGAGGACTGCGCCAAACCGGGAGACCTGGATAAAAAGAACCCAGGAAGTAAAATG GATGAAACAGGGAGCACCCCGGGATATGAGGGTAGGGGAGAGGGCGATGAGAACATCTCC AGGAAGCCGGGCAGCGTGCTGAAGACCCTGGACCCCATCCTCATCACCATCATCGCCATG AGCGCCCTGGGGGTCCTCCTGGGGGCTGTCTGCGGGGTGGTGCTGTACTGTGCCTGTTGG CACAACGGGATGTCCGAAAGAAACTTATCTGCCCTGGAGAACTATAACTTCGAGCTGGTG GATGGTGTGAAGTTGAAAAAAGACAAACTGAATCCACAGAGTACTTACTCGGAAGCCTGA GGCAGCGGAAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGCCCGCCTGGTGAGCCCTGTGGTTTACTCCCAGAACTCCGCCCACTGCATGACCTTC TGGTACCACATGTCTGGTTCCCACGTGGGCACGCTGCGGGTCAAGCTGCGCTACCAGAAG CCCGAGGAGTATGACCAGCTGGTCTGGATGGCCATCGGACACCAAGGGGACCACTGGAAA GGGGGGCGGGTCCTGCTCCACAAGTCTCTGAAACTTTACCAGGTGATTTTTGAGGGGGAG ATCGGAAAAGGCAGCCTTGGCGGGATTGCCGTGGACGACATCAGCATCAGTAACCACATT CCTCAGGAGGACTGCGCCAAACCGGGAGACCTGGATAAAAAGAACCCAGGAAGTAAAATG GATGAAACAGGGAGCACCCCGGGATATGAGGGTAGGGGAGAGGGCGATGAGAACATCTCC AGGAAGCCGGGCAGCGTGCTGAAGACCCTGGACCCCATCCTCATCACCATCATCGCCATG AGCGCCCTGGGGGTCCTCCTGGGGGCTGTCTGCGGGGTGGTGCTGTACTGTGCCTGTTGG CACAACGGGATGTCCGAAAGAAACTTATCTGCCCTGGAGAACTATAACTTCGAGCTGGTG GATGGTGTGAAGTTGAAAAAAGACAAACTGAATCCACAGAGTACTTACTCGGAAGCCTGA GGCAGCGGAAGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-119, - strand, RNAz p=0.911863 | |
| 368-566, + strand, RNAz p=0.839406 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, - strand, RNAz p=0.911863 | |
| 368-566, + strand, RNAz p=0.839406 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-226, gnl|bosTau2|chr13 (10411092-10410867) | |
| 1-226, gnl|canFam2|chr2 (6548683-6548368) | |
| 1-226, gnl|danRer3|chr24 (737278-736969) | |
| 1-226, gnl|dasNov1|scaffold_304 (114776-114467) | |
| 1-226, gnl|echTel1|scaffold_298650 (155259-155574) | |
| 1-226, gnl|fr1|chrUn (195092228-195092540) | |
| 1-226, gnl|galGal2|chr2 (13334490-13334177) | |
| 1-226, gnl|hg17|chr10 (33515143-33515455) | |
| 1-226, gnl|Hg17|chr10 (33515372-33515147) | |
| 1-226, gnl|loxAfr1|scaffold_3746 (94221-93908) | |
| 1-226, gnl|mm7|chr8 (127106699-127106391) | |
| 1-226, gnl|Mm7|chr8 (127106472-127106697) | |
| 1-226, gnl|monDom2|scaffold_7 (35310622-35310309) | |
| 1-226, gnl|oryCun1|scaffold_215045 (26355-26665) | |
| 1-226, gnl|panTro1|chr8 (33891220-33891532) | |
| 1-226, gnl|rheMac2|chr9 (33374918-33375230) | |
| 1-226, gnl|rn3|chr19 (58487383-58487071) | |
| 1-226, gnl|tetNig1|chrUn_random (133204048-133204342) | |
| 1-226, gnl|xenTro1|scaffold_940 (383569-383268) | |
| 368-660, gnl|bosTau2|chr13 (10405403-10405111) | |
| 368-660, gnl|Hg17|chr10 (33509302-33509010) | |
| 368-660, gnl|Mm7|chr8 (127111124-127111416) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-226, gnl|bosTau2|chr13 (10411092-10410867) | |
| 1-226, gnl|canFam2|chr2 (6548683-6548368) | |
| 1-226, gnl|danRer3|chr24 (737278-736969) | |
| 1-226, gnl|dasNov1|scaffold_304 (114776-114467) | |
| 1-226, gnl|echTel1|scaffold_298650 (155259-155574) | |
| 1-226, gnl|fr1|chrUn (195092228-195092540) | |
| 1-226, gnl|galGal2|chr2 (13334490-13334177) | |
| 1-226, gnl|hg17|chr10 (33515143-33515455) | |
| 1-226, gnl|Hg17|chr10 (33515372-33515147) | |
| 1-226, gnl|loxAfr1|scaffold_3746 (94221-93908) | |
| 1-226, gnl|mm7|chr8 (127106699-127106391) | |
| 1-226, gnl|Mm7|chr8 (127106472-127106697) | |
| 1-226, gnl|monDom2|scaffold_7 (35310622-35310309) | |
| 1-226, gnl|oryCun1|scaffold_215045 (26355-26665) | |
| 1-226, gnl|panTro1|chr8 (33891220-33891532) | |
| 1-226, gnl|rheMac2|chr9 (33374918-33375230) | |
| 1-226, gnl|rn3|chr19 (58487383-58487071) | |
| 1-226, gnl|tetNig1|chrUn_random (133204048-133204342) | |
| 1-226, gnl|xenTro1|scaffold_940 (383569-383268) | |
| 368-660, gnl|bosTau2|chr13 (10405403-10405111) | |
| 368-660, gnl|Hg17|chr10 (33509302-33509010) | |
| 368-660, gnl|Mm7|chr8 (127111124-127111416) |