Non-Coding RNA Search

Ss1.1-Ova1-OVRM10118E06.5

Sequence:


               
               CACTTCTGGAAGTGGAGGCACTTTGACTTAATGGTTAGTGCTTTTTGACTTTCAGCAAAT
CGCCTCCCCACTCTGTTCATCTTCTAGATAAAATGAAGTGGATGAAAAGGATGAGTATGT
GTTAAGGTTGCTTTGGCCTCTTCAGAGGTTTGGTTCTAATTATCTTGTGTGTTTAGAAAG
CATAACTTTTTCAGTAACTTAAAGCGAAGCGTCCTCAGTTTTATTCTTTTGCAAACACTC
TTCTTAAATATTGGCTAAATATTAAATTTTAACGTTAAACATGATTCTGTCTTATCCTCG
TTCAAATCTGACAAATCAAGATAGAACCCTAGATTTTAAAGGATCCAAAGGATATTCAGT
CAGTACCCAGGTATAACTCTTCATTCTTAAAATATGTGTAAAATGGCTCAGAATGACCAT
CAGAATGACTGTATTCCACTTCTCAGCCCTGAGGAACATAAGATGGTACATGAGGACAAA
ACACAGCCTGTGGGAAGAAGACTTAGGTATCATGAGACATTCAAGACTGTGACCATGAAG
TCACTTTGGGGTTTCTAGGGAGCAAATGAGGGAACAGTGAAGATGAGGGTCACTTAGGCA
GTAGTTAACCAAAACTGTTGTTGTTGCCAATGGTGAGTGAAATTCATTAAGCTGGAACTG
TTTGCTTAAATCAAGAACAACAGTAAAAGCAATGTCAGGGCTGGAAAATGTCAGGGGCAG
TTACATGCAGCAAACGGGGTTCGTGGGAACAAGGGGGAAAGAAAGTGGTTCCTTGGGCTG
CATTATGCGTGAGGCACCCCCTGGCTCCAGACCATGGCTCTCCCAGGCCTTTGCAGCCCA
CACTCTTTCCTGCCTTGTTTTGAATCAGTTTTACAGCATCAAAGGTATGATGAGACCTTT
TGTTTCATAACTTGACTCAGTCTTCCATCTGAATGGAGCCAATTTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACTTCTGGAAGTGGAGGCACTTTGACTTAATGGTTAGTGCTTTTTGACTTTCAGCAAAT
CGCCTCCCCACTCTGTTCATCTTCTAGATAAAATGAAGTGGATGAAAAGGATGAGTATGT
GTTAAGGTTGCTTTGGCCTCTTCAGAGGTTTGGTTCTAATTATCTTGTGTGTTTAGAAAG
CATAACTTTTTCAGTAACTTAAAGCGAAGCGTCCTCAGTTTTATTCTTTTGCAAACACTC
TTCTTAAATATTGGCTAAATATTAAATTTTAACGTTAAACATGATTCTGTCTTATCCTCG
TTCAAATCTGACAAATCAAGATAGAACCCTAGATTTTAAAGGATCCAAAGGATATTCAGT
CAGTACCCAGGTATAACTCTTCATTCTTAAAATATGTGTAAAATGGCTCAGAATGACCAT
CAGAATGACTGTATTCCACTTCTCAGCCCTGAGGAACATAAGATGGTACATGAGGACAAA
ACACAGCCTGTGGGAAGAAGACTTAGGTATCATGAGACATTCAAGACTGTGACCATGAAG
TCACTTTGGGGTTTCTAGGGAGCAAATGAGGGAACAGTGAAGATGAGGGTCACTTAGGCA
GTAGTTAACCAAAACTGTTGTTGTTGCCAATGGTGAGTGAAATTCATTAAGCTGGAACTG
TTTGCTTAAATCAAGAACAACAGTAAAAGCAATGTCAGGGCTGGAAAATGTCAGGGGCAG
TTACATGCAGCAAACGGGGTTCGTGGGAACAAGGGGGAAAGAAAGTGGTTCCTTGGGCTG
CATTATGCGTGAGGCACCCCCTGGCTCCAGACCATGGCTCTCCCAGGCCTTTGCAGCCCA
CACTCTTTCCTGCCTTGTTTTGAATCAGTTTTACAGCATCAAAGGTATGATGAGACCTTT
TGTTTCATAACTTGACTCAGTCTTCCATCTGAATGGAGCCAATTTTCA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               3-166, gnl|bosTau2|chr13 (35589554-35589392)
               

               
               3-166, gnl|Hg17|chr9 (81468514-81468324)
               

               
               3-166, gnl|Mm7|chr4 (71582176-71581974)
               


               
               183-948, gnl|bosTau2|chr13 (35589401-35588644)
               

               
               183-948, gnl|Hg17|chr9 (81468333-81467201)
               

               
               183-948, gnl|Mm7|chr4 (71582002-71581192)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-166, gnl|bosTau2|chr13 (35589554-35589392)
               

               
               3-166, gnl|Hg17|chr9 (81468514-81468324)
               

               
               3-166, gnl|Mm7|chr4 (71582176-71581974)
               


               
               183-948, gnl|bosTau2|chr13 (35589401-35588644)
               

               
               183-948, gnl|Hg17|chr9 (81468333-81467201)
               

               
               183-948, gnl|Mm7|chr4 (71582002-71581192)

	3-166, gnl\|bosTau2\|chr13 (35589554-35589392)
	3-166, gnl\|Hg17\|chr9 (81468514-81468324)
	3-166, gnl\|Mm7\|chr4 (71582176-71581974)

	183-948, gnl\|bosTau2\|chr13 (35589401-35588644)
	183-948, gnl\|Hg17\|chr9 (81468333-81467201)
	183-948, gnl\|Mm7\|chr4 (71582002-71581192)