Ss1.1-Ova1-OVRM10124A08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATAAATGCGCGGGCCGCGGCCGGGCCCCACAGGAGCAGCCGCCCGGGGCGCCGGAGCTGC GGGCCGCGCCGCCGGGATGAGCGCCAGCACGGGCGGTGGCGGCGGCGGGGACAGCGGCGG CAGCAGCAGCAGCAGCTCGCAGGCCTCCTGCGGGCCCGAGTCCTCGGGATCCGAACTAGC TCCCCCCACACCGGCGCCTCGGATGCTGCAGGGGCTGCTGGGCTCCGACGACGAGGAGCA GGAGGACCCCAAGGACTACTGCAAGGGCGGCTACTACCCTGTGAAGATCGGGGACCTGTT CAATGGGCGGTACCACGTGGTGCGCAAGCTGGGCTGGGGCCACTTCTCCACCGTCTGGCT CTGCTGGGACATTCAGCGCAAGCGCTTCGTGGCCCTCAAAGTGGTGAAGAGCGCGGGGCA CTACACGGAGACAGCTGTGGATGAGATCAAGCTCCTGAAATGTGTGCGGGACAGTGACCC CAGTGACCCCAAAAGAGAAACCATTGTCCAGCTCATCGACGACTTCCGGATCTCAGGGGT GAACGGAGTTCATGTGTGCATGGTATTGGAGGTGCTGGGCCACCAGCTCCTCAAGTGGAT CATCAAGTCCAACTACCAGGGCCTGCCCGTGCCCTGTGTGAAGAGCATCGTGAGGCAGGT GCTGCACGGTCTGGATTACCTACACACCAAGTGCAAGATCATCCACACAGACATCAAGCC CGAGAACATCCTGCTGTGCGTGGGTGACGCCTACATCAGGCGCCTGGCTGCCGAAGCCAC AGAGTGGCAGCAGTCAGGGGCACCACCCCCCTCCCGCTCCACAGTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATAAATGCGCGGGCCGCGGCCGGGCCCCACAGGAGCAGCCGCCCGGGGCGCCGGAGCTGC GGGCCGCGCCGCCGGGATGAGCGCCAGCACGGGCGGTGGCGGCGGCGGGGACAGCGGCGG CAGCAGCAGCAGCAGCTCGCAGGCCTCCTGCGGGCCCGAGTCCTCGGGATCCGAACTAGC TCCCCCCACACCGGCGCCTCGGATGCTGCAGGGGCTGCTGGGCTCCGACGACGAGGAGCA GGAGGACCCCAAGGACTACTGCAAGGGCGGCTACTACCCTGTGAAGATCGGGGACCTGTT CAATGGGCGGTACCACGTGGTGCGCAAGCTGGGCTGGGGCCACTTCTCCACCGTCTGGCT CTGCTGGGACATTCAGCGCAAGCGCTTCGTGGCCCTCAAAGTGGTGAAGAGCGCGGGGCA CTACACGGAGACAGCTGTGGATGAGATCAAGCTCCTGAAATGTGTGCGGGACAGTGACCC CAGTGACCCCAAAAGAGAAACCATTGTCCAGCTCATCGACGACTTCCGGATCTCAGGGGT GAACGGAGTTCATGTGTGCATGGTATTGGAGGTGCTGGGCCACCAGCTCCTCAAGTGGAT CATCAAGTCCAACTACCAGGGCCTGCCCGTGCCCTGTGTGAAGAGCATCGTGAGGCAGGT GCTGCACGGTCTGGATTACCTACACACCAAGTGCAAGATCATCCACACAGACATCAAGCC CGAGAACATCCTGCTGTGCGTGGGTGACGCCTACATCAGGCGCCTGGCTGCCGAAGCCAC AGAGTGGCAGCAGTCAGGGGCACCACCCCCCTCCCGCTCCACAGTCAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 695-814, - strand, RNAz p=0.600089 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 695-814, - strand, RNAz p=0.600089 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 97-267, gnl|bosTau2|chrX (13503104-13502932) | |
| 97-267, gnl|Hg17|chrX (152567478-152567649) | |
| 97-267, gnl|Mm7|chrX (69161186-69161364) | |
| 656-824, gnl|bosTau2|chrX (13501370-13501202) | |
| 656-824, gnl|canFam2|chrX (124640065-124640244) | |
| 656-824, gnl|danRer3|chr8 (1787548-1787735) | |
| 656-824, gnl|dasNov1|scaffold_231822 (4034-3863) | |
| 656-824, gnl|echTel1|scaffold_298064 (4743-4564) | |
| 656-824, gnl|fr1|chrUn (261496786-261496600) | |
| 656-824, gnl|galGal2|chr32 (944265-944444) | |
| 656-824, gnl|hg17|chrX (152569246-152569425) | |
| 656-824, gnl|Hg17|chrX (152569252-152569420) | |
| 656-824, gnl|loxAfr1|scaffold_48249 (490-669) | |
| 656-824, gnl|mm7|chrX (69162838-69163017) | |
| 656-824, gnl|Mm7|chrX (69162844-69163012) | |
| 656-824, gnl|monDom2|scaffold_178 (1302038-1302219) | |
| 656-824, gnl|oryCun1|scaffold_179710 (15017-15196) | |
| 656-824, gnl|panTro1|chrX (157856964-157857143) | |
| 656-824, gnl|rheMac2|chrX (151897288-151897467) | |
| 656-824, gnl|rn3|chrX (159773645-159773824) | |
| 656-824, gnl|tetNig1|chrUn_random (84899176-84899004) | |
| 656-824, gnl|xenTro1|scaffold_317 (241357-241180) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 97-267, gnl|bosTau2|chrX (13503104-13502932) | |
| 97-267, gnl|Hg17|chrX (152567478-152567649) | |
| 97-267, gnl|Mm7|chrX (69161186-69161364) | |
| 656-824, gnl|bosTau2|chrX (13501370-13501202) | |
| 656-824, gnl|canFam2|chrX (124640065-124640244) | |
| 656-824, gnl|danRer3|chr8 (1787548-1787735) | |
| 656-824, gnl|dasNov1|scaffold_231822 (4034-3863) | |
| 656-824, gnl|echTel1|scaffold_298064 (4743-4564) | |
| 656-824, gnl|fr1|chrUn (261496786-261496600) | |
| 656-824, gnl|galGal2|chr32 (944265-944444) | |
| 656-824, gnl|hg17|chrX (152569246-152569425) | |
| 656-824, gnl|Hg17|chrX (152569252-152569420) | |
| 656-824, gnl|loxAfr1|scaffold_48249 (490-669) | |
| 656-824, gnl|mm7|chrX (69162838-69163017) | |
| 656-824, gnl|Mm7|chrX (69162844-69163012) | |
| 656-824, gnl|monDom2|scaffold_178 (1302038-1302219) | |
| 656-824, gnl|oryCun1|scaffold_179710 (15017-15196) | |
| 656-824, gnl|panTro1|chrX (157856964-157857143) | |
| 656-824, gnl|rheMac2|chrX (151897288-151897467) | |
| 656-824, gnl|rn3|chrX (159773645-159773824) | |
| 656-824, gnl|tetNig1|chrUn_random (84899176-84899004) | |
| 656-824, gnl|xenTro1|scaffold_317 (241357-241180) |