Ss1.1-Ova1-OVRM10127H11.5
|
GCATAAAAAGTATAGAAGTATGCAAAATATTAAAAGACTGAGGTGAAAAGAAATCTGGCT
CGGGTATGGGAAAACATAAAGAGGGAGCTAGAAGGAAATGATGAGAAAATATAATAGCTG
AAGTGAAATTTTTTTTAGAAGCAGTAAAGCAGAAATTCAGAGCATCGATAAGACAAATTG
AAAGGACTGTGTAAAATGAGGTGATGGGTGTGATGAAAACCAAAGTTCCTTCTAGAACTT
TGAGATTATAGAACTAGGAGTGAGGGAGATAGGAGACCACTTCATGGGAACTTTTGTTTC
TTTGAGAGTTTAGGTTTGAATTAGTCACCAGGTAAATCAAGCACACGCACGGGTGCGCAC
GCGCGCACACACACAACACAGCATTGAAAGTCCTTGACTTAGGTCTTATCCTGAGAAACA
TGGTTATTTATGTTATTCTGATGGTTACTTTTAGAGCTATTAAGAGAAAATGAATGCGGA
CACCAAATCTTCGGAGAAGTAGCAGTCCATGGCTAGGTTACGAGGCCAGGGAAAGGAGGG
AAGGCTTTTGCAGATGAAGAACAATATAAGCAGCTTTAAATCAATGTGGACAGTAAATCA
GCACAACAGTAACTACCCAATTTAGAGATCAAAGAGTGGAAACTTGAGAAAAGTGCACAG
TAAATACATAAAACATAGTAACAAAACCTGTTGGAAATTGTAAGGAAAGGAGACTTTGTT
CAGATTGAGGAGTGTGTGCACGCTCCCACGTGGCTGTGTACATATGTGTAAGGGAATCAT
AAACATTTATCCTAACTGAAAATGAAGCTAAACTGTGCTTGCATTATTGCTTTGATATTA
ACCTGCCTTTGAGATAGTTCTCTGGTGGTCTAGTGCTTAGGATTTGGTGCTTTCACCCCT
GTGGCCTGGGTTTGATCCTTGGTCTGGGAACTGAGATCCCACATCAAGCCATTGCACATG
CGGGAAAAAAAATTAACATGCCTCCAAGTAATACATACCATAAAGGACATACACTTCTAA
TTATACAGCCTTGTCCTGTACTGTGCTTGAATCAACCTACTGTAGAATGTTATTTTCTGT
GCTTTATTTGCAAGTTAACATTTTAATAATTATCATAAATAGTTACCTGATTTGCATATT
CTGGTTCATAATCCAACTGTTCTGTGGATCAACCACAGTTCTCTTATTATTCATGCCAAG
ACTTCTATATTAGTCTGAATAATCTATCCTAGACTGCATTTCTGGTTCCAGTTCTCAGAG
CTTTTTATAACTCANAGTTATAGTGCTTTTTTAAATCAAAGATTGAATCATACATGTGCT
AGTATAGTAATCTCTTTGACCCAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCATAAAAAGTATAGAAGTATGCAAAATATTAAAAGACTGAGGTGAAAAGAAATCTGGCT
CGGGTATGGGAAAACATAAAGAGGGAGCTAGAAGGAAATGATGAGAAAATATAATAGCTG
AAGTGAAATTTTTTTTAGAAGCAGTAAAGCAGAAATTCAGAGCATCGATAAGACAAATTG
AAAGGACTGTGTAAAATGAGGTGATGGGTGTGATGAAAACCAAAGTTCCTTCTAGAACTT
TGAGATTATAGAACTAGGAGTGAGGGAGATAGGAGACCACTTCATGGGAACTTTTGTTTC
TTTGAGAGTTTAGGTTTGAATTAGTCACCAGGTAAATCAAGCACACGCACGGGTGCGCAC
GCGCGCACACACACAACACAGCATTGAAAGTCCTTGACTTAGGTCTTATCCTGAGAAACA
TGGTTATTTATGTTATTCTGATGGTTACTTTTAGAGCTATTAAGAGAAAATGAATGCGGA
CACCAAATCTTCGGAGAAGTAGCAGTCCATGGCTAGGTTACGAGGCCAGGGAAAGGAGGG
AAGGCTTTTGCAGATGAAGAACAATATAAGCAGCTTTAAATCAATGTGGACAGTAAATCA
GCACAACAGTAACTACCCAATTTAGAGATCAAAGAGTGGAAACTTGAGAAAAGTGCACAG
TAAATACATAAAACATAGTAACAAAACCTGTTGGAAATTGTAAGGAAAGGAGACTTTGTT
CAGATTGAGGAGTGTGTGCACGCTCCCACGTGGCTGTGTACATATGTGTAAGGGAATCAT
AAACATTTATCCTAACTGAAAATGAAGCTAAACTGTGCTTGCATTATTGCTTTGATATTA
ACCTGCCTTTGAGATAGTTCTCTGGTGGTCTAGTGCTTAGGATTTGGTGCTTTCACCCCT
GTGGCCTGGGTTTGATCCTTGGTCTGGGAACTGAGATCCCACATCAAGCCATTGCACATG
CGGGAAAAAAAATTAACATGCCTCCAAGTAATACATACCATAAAGGACATACACTTCTAA
TTATACAGCCTTGTCCTGTACTGTGCTTGAATCAACCTACTGTAGAATGTTATTTTCTGT
GCTTTATTTGCAAGTTAACATTTTAATAATTATCATAAATAGTTACCTGATTTGCATATT
CTGGTTCATAATCCAACTGTTCTGTGGATCAACCACAGTTCTCTTATTATTCATGCCAAG
ACTTCTATATTAGTCTGAATAATCTATCCTAGACTGCATTTCTGGTTCCAGTTCTCAGAG
CTTTTTATAACTCANAGTTATAGTGCTTTTTTAAATCAAAGATTGAATCATACATGTGCT
AGTATAGTAATCTCTTTGACCCAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
366-853, gnl|bosTau2|chr1 (27662327-27661800) |
|
366-853, gnl|Hg17|chr3 (17478168-17477675) |
| |
|
973-1344, gnl|bosTau2|chr1 (27661815-27661443) |
|
973-1344, gnl|canFam2|chr23 (28514600-28513803) |
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973-1344, gnl|dasNov1|scaffold_119973 (4349-3684) |
|
973-1344, gnl|echTel1|scaffold_315134 (88469-87716) |
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973-1344, gnl|hg17|chr3 (17477138-17477906) |
|
973-1344, gnl|Hg17|chr3 (17477690-17477328) |
|
973-1344, gnl|loxAfr1|scaffold_7251 (7677-6907) |
|
973-1344, gnl|oryCun1|scaffold_189598 (5912-5184) |
|
973-1344, gnl|panTro1|chr2 (18168287-18169065) |
|
973-1344, gnl|rheMac2|chr2 (159771749-159772554) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
366-853, gnl|bosTau2|chr1 (27662327-27661800) |
|
366-853, gnl|Hg17|chr3 (17478168-17477675) |
| |
|
973-1344, gnl|bosTau2|chr1 (27661815-27661443) |
|
973-1344, gnl|canFam2|chr23 (28514600-28513803) |
|
973-1344, gnl|dasNov1|scaffold_119973 (4349-3684) |
|
973-1344, gnl|echTel1|scaffold_315134 (88469-87716) |
|
973-1344, gnl|hg17|chr3 (17477138-17477906) |
|
973-1344, gnl|Hg17|chr3 (17477690-17477328) |
|
973-1344, gnl|loxAfr1|scaffold_7251 (7677-6907) |
|
973-1344, gnl|oryCun1|scaffold_189598 (5912-5184) |
|
973-1344, gnl|panTro1|chr2 (18168287-18169065) |
|
973-1344, gnl|rheMac2|chr2 (159771749-159772554) |
