Ss1.1-Ova1-OVRM10128A05.5
|
CTTGACAGCTCATTTCTTTTCACCACTGAGTAAGATTCCATGCTATGGATGATGAATGTG
------------------------------------------------------------
------------AAAAAAGTTGCTGTCAAGATCCACATTCAGATTTTTCTGTGGTCATAA
GTTTTCAAATTGGTTGGGTACTGCTTTAACTCTGTATAGAATAAATGGGGTTGTGCGCGA
TGGGACAGATTTACAAAACCAAGTATATCACATGGTAAGTGCTTTCACAAAGGTGTGAAC
ATAAGAGTCAACTGTTGAGTCTAAGAAAAAGGCAAAAGTAACAATAGATAAATTTACTTT
TAGGTTAAAATGCCTCTTGTTTCCTGCTTGCCCACTTTTGAGTGTTGGTGGCCTGGAGTC
TACTGGGCCAATTGGAGAGTGACTTACACCCCAGTCAGTGGCGAAGAAGGTGGAATAGAG
GGAGAAAGAAAGTACATTTACCGCCTGGGAGATGGGATGCCCGACAGGTGGTACCCGCAT
ACCTTTCTTGAATATACAGTGGGACGTGCACACAAGCTCAGCTTCAATTAGCAAGTTGTC
TTCATTTACAGAGGAATTCATAGAAAAGAGTATAATAAATATAGGGGTCAAATTATAAGG
ATAGAAAGGACTCTCCCCGACACCCTGCAGGACAAGAAATTTATAAGCTGCAAGTGATCA
GAAACTTTTTGATGCATAGAGCAGAAAGAGGAGAAAACTCCAGATTTCTCTGTAAGTGAA
CAACAAAACAACCAGAAATAAGTTGTAATTTATAATGTTACAATTTAGTTGGTGGAAGTT
TTAAATTAATCCCTTGGTAACTGTATCTTGAAGTATCTTGCTGTGTTTTTGTCTAAAAGG
CGGTTGTTAAAAATTTATGTGATTAGTTACATATTTATAATGCCTGCTTTCTTGTGGAGG
AGTTTTCTAGAAATAATCTCAAGTAACTGGATTGCAAGCTATTTTTACTCTTTCTCAACA
AGCTCTATCTAGGGAAAACTAAGGTAATTGGTTCATGAAACTACTGACCAGATTAACCTC
ATGAATACTAACCTGATTGCAACAGACCTTGGACCTGGGTAGAAACAATCAAATTCTTTA
CAGCCAGCTTGGCAAATGCAAATATTTCGAGTAGTGGCAAAAATTTGAGGTTTATTTTAG
TTCAGCTTCCTTACTTCTTTCGGGTCCTAGACATAGAAGCACAGGCTGGTTTCTGTAGAT
GAGAAATAGAACAGAGCAGACAGGGATGGTGTGACCAAACTCTGTACATGGGACAGATAT
TCTTTGTAAGTCATAACTCTATTTGGTAAAGGACCGACTGTGTGTGGTTAGCCTTCAGTA
TAATTTCCCCCGTTGGTGTTAATATTCTCTGTCATATAGAGACTAGATTCCAGTGTAACT
TTTTTTCCTTTTATGACCATGCCCACAACCTATGGAAGTTCCTGGGTCAGGGACTGAATC
------------------------------------------------------------
------------------------------------------------------------
------------CAGTAGAATCTTAGAGCTAGGAATTACTGCTGTGGTGCAGTGGGATTG
GCGGGGTCTCTCTGAAGCGCCAGGACACAGCTTCCATCCCAGGCTGGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTTGACAGCTCATTTCTTTTCACCACTGAGTAAGATTCCATGCTATGGATGATGAATGTG
------------------------------------------------------------
------------AAAAAAGTTGCTGTCAAGATCCACATTCAGATTTTTCTGTGGTCATAA
GTTTTCAAATTGGTTGGGTACTGCTTTAACTCTGTATAGAATAAATGGGGTTGTGCGCGA
TGGGACAGATTTACAAAACCAAGTATATCACATGGTAAGTGCTTTCACAAAGGTGTGAAC
ATAAGAGTCAACTGTTGAGTCTAAGAAAAAGGCAAAAGTAACAATAGATAAATTTACTTT
TAGGTTAAAATGCCTCTTGTTTCCTGCTTGCCCACTTTTGAGTGTTGGTGGCCTGGAGTC
TACTGGGCCAATTGGAGAGTGACTTACACCCCAGTCAGTGGCGAAGAAGGTGGAATAGAG
GGAGAAAGAAAGTACATTTACCGCCTGGGAGATGGGATGCCCGACAGGTGGTACCCGCAT
ACCTTTCTTGAATATACAGTGGGACGTGCACACAAGCTCAGCTTCAATTAGCAAGTTGTC
TTCATTTACAGAGGAATTCATAGAAAAGAGTATAATAAATATAGGGGTCAAATTATAAGG
ATAGAAAGGACTCTCCCCGACACCCTGCAGGACAAGAAATTTATAAGCTGCAAGTGATCA
GAAACTTTTTGATGCATAGAGCAGAAAGAGGAGAAAACTCCAGATTTCTCTGTAAGTGAA
CAACAAAACAACCAGAAATAAGTTGTAATTTATAATGTTACAATTTAGTTGGTGGAAGTT
TTAAATTAATCCCTTGGTAACTGTATCTTGAAGTATCTTGCTGTGTTTTTGTCTAAAAGG
CGGTTGTTAAAAATTTATGTGATTAGTTACATATTTATAATGCCTGCTTTCTTGTGGAGG
AGTTTTCTAGAAATAATCTCAAGTAACTGGATTGCAAGCTATTTTTACTCTTTCTCAACA
AGCTCTATCTAGGGAAAACTAAGGTAATTGGTTCATGAAACTACTGACCAGATTAACCTC
ATGAATACTAACCTGATTGCAACAGACCTTGGACCTGGGTAGAAACAATCAAATTCTTTA
CAGCCAGCTTGGCAAATGCAAATATTTCGAGTAGTGGCAAAAATTTGAGGTTTATTTTAG
TTCAGCTTCCTTACTTCTTTCGGGTCCTAGACATAGAAGCACAGGCTGGTTTCTGTAGAT
GAGAAATAGAACAGAGCAGACAGGGATGGTGTGACCAAACTCTGTACATGGGACAGATAT
TCTTTGTAAGTCATAACTCTATTTGGTAAAGGACCGACTGTGTGTGGTTAGCCTTCAGTA
TAATTTCCCCCGTTGGTGTTAATATTCTCTGTCATATAGAGACTAGATTCCAGTGTAACT
TTTTTTCCTTTTATGACCATGCCCACAACCTATGGAAGTTCCTGGGTCAGGGACTGAATC
------------------------------------------------------------
------------------------------------------------------------
------------CAGTAGAATCTTAGAGCTAGGAATTACTGCTGTGGTGCAGTGGGATTG
GCGGGGTCTCTCTGAAGCGCCAGGACACAGCTTCCATCCCAGGCTGGC
|
|
61-294, gnl|bosTau2|chr4 (53221617-53221379) |
|
61-294, gnl|canFam2|chr14 (6488409-6488131) |
|
61-294, gnl|hg17|chr7 (132974707-132974985) |
|
61-294, gnl|Hg17|chr7 (132974753-132974984) |
|
61-294, gnl|panTro1|chr6 (135604108-135604378) |
|
61-294, gnl|rheMac2|chr3 (171239071-171239345) |
| |
|
297-484, gnl|bosTau2|chr4 (53219114-53218928) |
|
297-484, gnl|canFam2|chr14 (6487508-6487348) |
|
297-484, gnl|dasNov1|scaffold_16437 (17825-17998) |
|
297-484, gnl|hg17|chr7 (132975873-132976038) |
|
297-484, gnl|Hg17|chr7 (132975873-132976037) |
|
297-484, gnl|panTro1|chr6 (135605277-135605442) |
|
297-484, gnl|rheMac2|chr3 (171240238-171240405) |
| |
|
496-1361, gnl|bosTau2|chr4 (53218454-53217590) |
|
496-1361, gnl|Hg17|chr7 (132976584-132978276) |
|
496-1361, gnl|Mm7|chr6 (33702832-33703588) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
61-294, gnl|bosTau2|chr4 (53221617-53221379) |
|
61-294, gnl|canFam2|chr14 (6488409-6488131) |
|
61-294, gnl|hg17|chr7 (132974707-132974985) |
|
61-294, gnl|Hg17|chr7 (132974753-132974984) |
|
61-294, gnl|panTro1|chr6 (135604108-135604378) |
|
61-294, gnl|rheMac2|chr3 (171239071-171239345) |
| |
|
297-484, gnl|bosTau2|chr4 (53219114-53218928) |
|
297-484, gnl|canFam2|chr14 (6487508-6487348) |
|
297-484, gnl|dasNov1|scaffold_16437 (17825-17998) |
|
297-484, gnl|hg17|chr7 (132975873-132976038) |
|
297-484, gnl|Hg17|chr7 (132975873-132976037) |
|
297-484, gnl|panTro1|chr6 (135605277-135605442) |
|
297-484, gnl|rheMac2|chr3 (171240238-171240405) |
| |
|
496-1361, gnl|bosTau2|chr4 (53218454-53217590) |
|
496-1361, gnl|Hg17|chr7 (132976584-132978276) |
|
496-1361, gnl|Mm7|chr6 (33702832-33703588) |
