Non-Coding RNA Search

Ss1.1-Ova1-OVRM10130C09.5

Sequence:


               
               TTAAGAATCAATTTTCACTTTCTGCCAAAGTTTCCGTTTTGTTTCTAATCTCGTGTGTAA
TCTATTATGTTGTACAATTTTTTAGGCCCTGAAAAGTGTTGTCCTTTATGTTATCTTGGC
TCCTTTTGACAATGAACAGTCAGATTTGGTTCACCGAATAAGTGGTGACAAGAAATTAGA
GAAATCCCTAAATACAAGTAAGTACTTTTATAATTAGTATAGTATGTCTCAGTGGAAGCA
CCATTTTGAAAGGAAATTGGTTAACCTAAGTGTATACTTCTTAATTGGTTGCTGATAGAC
TATATTAGAATCTAAATAGAGAAAGTGGGATTTTTTTTTTTAGGACTGCATTAGAAGAAA
TTAATGTAATAAGATTATGATACACTTCAGTCAAAGCCACTTATCAAATAGAAGTTTTAT
TTCAAGCTCACTTTAGCAGTTTTTGGTTAATTAACCATTTGATAAATCATTAATAAATGT
TTGGGGGCTTTGTGATTTTGGAAGTGCATGTTTCTGAAGATCTGTTCTATAAAACAGACA
TAGGCTTTATCATAAGCACAATGGACTTTTTCTTTTTTTTTTTTCCCCCTGTAGTCATGG
TATGCAGATGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAGAATCAATTTTCACTTTCTGCCAAAGTTTCCGTTTTGTTTCTAATCTCGTGTGTAA
TCTATTATGTTGTACAATTTTTTAGGCCCTGAAAAGTGTTGTCCTTTATGTTATCTTGGC
TCCTTTTGACAATGAACAGTCAGATTTGGTTCACCGAATAAGTGGTGACAAGAAATTAGA
GAAATCCCTAAATACAAGTAAGTACTTTTATAATTAGTATAGTATGTCTCAGTGGAAGCA
CCATTTTGAAAGGAAATTGGTTAACCTAAGTGTATACTTCTTAATTGGTTGCTGATAGAC
TATATTAGAATCTAAATAGAGAAAGTGGGATTTTTTTTTTTAGGACTGCATTAGAAGAAA
TTAATGTAATAAGATTATGATACACTTCAGTCAAAGCCACTTATCAAATAGAAGTTTTAT
TTCAAGCTCACTTTAGCAGTTTTTGGTTAATTAACCATTTGATAAATCATTAATAAATGT
TTGGGGGCTTTGTGATTTTGGAAGTGCATGTTTCTGAAGATCTGTTCTATAAAACAGACA
TAGGCTTTATCATAAGCACAATGGACTTTTTCTTTTTTTTTTTTCCCCCTGTAGTCATGG
TATGCAGATGTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               461-550, - strand, RNAz p=0.983219

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               461-550, - strand, RNAz p=0.983219

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               7-550, gnl|bosTau2|chr19 (43561088-43561636)
               

               
               7-550, gnl|Hg17|chr17 (62772508-62771657)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-550, gnl|bosTau2|chr19 (43561088-43561636)
               

               
               7-550, gnl|Hg17|chr17 (62772508-62771657)

	7-550, gnl\|bosTau2\|chr19 (43561088-43561636)
	7-550, gnl\|Hg17\|chr17 (62772508-62771657)