Non-Coding RNA Search

Ss1.1-Ova1-OVRM10130H09.5

Sequence:


               
               ATTTTGTGCTAGAAGCCGAGATAAATCCTGCCCGGTTCTGTGTGAAGTGGGCGGCGGAGC
CAGGGTCCCTGGAATGGCGGAGGCTCTGTCAGGCCTAGGCGATTCGAGTGCGGCGGGCGC
AGCCGCTCTGAGTTCCGCCTCGTCGGAGACCGGGACGCGGCGCCTCAGCGACCTGCGGGT
GATTGATCTGCGGGCGGAGCTGAGGAAACGGAATCTGGACTCGAGCGGCAACAAGAGCGT
TTTGATGGAGCGGCTCAAAAAGGCAATTGAAGATGAAGGGGGTAATCCTGATGAAATTGA
AATTACCTCTGAAGGAAATAAGAAGACATCAAAGAGATCCAATAAAGGGCGCAAACCAGA
AGAAGAGGGTGTGGAAGATAATGGGCTAGAGGAAAATTCTGGGGATGGACAGGAGGATGT
TGAGACCAGTTTAGAGAACTTGCAGGATATTGACATGATGGATATCAGTGTGTTGGATGA
AGCAGAAATCGATAATGGAAGCGTTGCAGATTGTGTGGAAGACGAAGATGCTGATAATCT
CCCAGAGTCCCTGTCTGATAGTAGAGAGCTAGTCGAAGGAGAAATGAAAGAGCTTCCTGA
GCAGCTTCAAGAACATGCTATAGAGGACAAAGAAACTATAAACAATTTAGATACTTCATC
ATCTGACTTCACTATATTACAGGAAATTGAAGAGCCATCCTTGGAGCCAGAAAATGAGAA
AATACTCGACATTTTGGGGGAAACTTGTAAATCTGAGCCAGTAAAAGAAGAAGGTTCCGA
GCTGGAGCAGCCATTTGCACAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTGTGCTAGAAGCCGAGATAAATCCTGCCCGGTTCTGTGTGAAGTGGGCGGCGGAGC
CAGGGTCCCTGGAATGGCGGAGGCTCTGTCAGGCCTAGGCGATTCGAGTGCGGCGGGCGC
AGCCGCTCTGAGTTCCGCCTCGTCGGAGACCGGGACGCGGCGCCTCAGCGACCTGCGGGT
GATTGATCTGCGGGCGGAGCTGAGGAAACGGAATCTGGACTCGAGCGGCAACAAGAGCGT
TTTGATGGAGCGGCTCAAAAAGGCAATTGAAGATGAAGGGGGTAATCCTGATGAAATTGA
AATTACCTCTGAAGGAAATAAGAAGACATCAAAGAGATCCAATAAAGGGCGCAAACCAGA
AGAAGAGGGTGTGGAAGATAATGGGCTAGAGGAAAATTCTGGGGATGGACAGGAGGATGT
TGAGACCAGTTTAGAGAACTTGCAGGATATTGACATGATGGATATCAGTGTGTTGGATGA
AGCAGAAATCGATAATGGAAGCGTTGCAGATTGTGTGGAAGACGAAGATGCTGATAATCT
CCCAGAGTCCCTGTCTGATAGTAGAGAGCTAGTCGAAGGAGAAATGAAAGAGCTTCCTGA
GCAGCTTCAAGAACATGCTATAGAGGACAAAGAAACTATAAACAATTTAGATACTTCATC
ATCTGACTTCACTATATTACAGGAAATTGAAGAGCCATCCTTGGAGCCAGAAAATGAGAA
AATACTCGACATTTTGGGGGAAACTTGTAAATCTGAGCCAGTAAAAGAAGAAGGTTCCGA
GCTGGAGCAGCCATTTGCACAGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|3080645|gb|AAC14667.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3080645|gb|AAC14667.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-263, gnl|bosTau2|chr7 (13380795-13380533)
               

               
               1-263, gnl|Hg17|chr19 (5574145-5574406)
               

               
               1-263, gnl|Mm7|chr17 (54794669-54794984)
               


               
               409-623, gnl|bosTau2|chr7 (13367304-13367090)
               

               
               409-623, gnl|Hg17|chr19 (5592747-5592961)
               

               
               409-623, gnl|Mm7|chr17 (54803490-54803704)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-263, gnl|bosTau2|chr7 (13380795-13380533)
               

               
               1-263, gnl|Hg17|chr19 (5574145-5574406)
               

               
               1-263, gnl|Mm7|chr17 (54794669-54794984)
               


               
               409-623, gnl|bosTau2|chr7 (13367304-13367090)
               

               
               409-623, gnl|Hg17|chr19 (5592747-5592961)
               

               
               409-623, gnl|Mm7|chr17 (54803490-54803704)

	1-263, gnl\|bosTau2\|chr7 (13380795-13380533)
	1-263, gnl\|Hg17\|chr19 (5574145-5574406)
	1-263, gnl\|Mm7\|chr17 (54794669-54794984)

	409-623, gnl\|bosTau2\|chr7 (13367304-13367090)
	409-623, gnl\|Hg17\|chr19 (5592747-5592961)
	409-623, gnl\|Mm7\|chr17 (54803490-54803704)