Ss1.1-Ova1-OVRM10133H02.5
|
TTTTTCAAAGGGTTAGAATCCTTCAGATACATTGCCGGTAGAACAGCTGAACTAAGTTCG
TCTTCCATTCATTTTAGAAATAATTTCAGGAATTTGCAGTGCTTTAGGGCACCTTTGATT
GAATATCAGTTGATTATTGTAGTTACATAGAAATGTCAAATTAGAGCATTCCTGCTGATA
CAGTTTACTTTTTCAGTGATTGTACTTAGAGATATGTGTGACTAAAACTCTCAGGCTGGT
TTCCTCTTAGAATTTTCTGTTCCTGTTTTGCATTTGAAATACAAGTTTGGAGTTAAAAGC
CCATATTGTGTTTAACTCTTAGGCTTTGTCTTCTCTGTAAAAGGGTGATTCAGCTCTTTA
TCAGCACCACCACCCCTCCCGTACCCTCACCCTCCAAACAGGGAAATTTCCAAAGGCAGG
GAGCTTAATCTTTTCCTGTAACTCCTCTTAATTTCACCTATTCCGGTTCCTGCTGGAACT
TGAAATTCCTATGACAGTTTCAGTAATTTGAAATCCTGATGGCAGGAATCCTTTAAACTA
GATTTCAGGGTTCGCTGATGGCCTAGTGGAGCTTGGGGTCAGTCCCTGGCACGGGAATTT
CTACCTGCCATGGGCATGGCCAGAAAACAACAACAACAAAAACAAGGGAGGAAGAAAAAA
AATACAACAGTTGAGAATCCTGGGGTCCTGATTAGAAGCTGTCTTTCAGATTCCCCCTCA
CTAGAAAGAGAAACCTTGCCAGGCAGTCCTGCCACCGTTGCCATCCCTGGGACAGGGACA
TCTTGGGGACCCCTGCATCCCTAGGATGTATAGTCTACCCAGGACAGGGAGATCTCTAGG
ACCCCCACATGTGCAGGATGGACAGTCCACCTGGGACAGAGGGATCTCAGGGACCCCCCC
ACCCGACACCTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTTCAAAGGGTTAGAATCCTTCAGATACATTGCCGGTAGAACAGCTGAACTAAGTTCG
TCTTCCATTCATTTTAGAAATAATTTCAGGAATTTGCAGTGCTTTAGGGCACCTTTGATT
GAATATCAGTTGATTATTGTAGTTACATAGAAATGTCAAATTAGAGCATTCCTGCTGATA
CAGTTTACTTTTTCAGTGATTGTACTTAGAGATATGTGTGACTAAAACTCTCAGGCTGGT
TTCCTCTTAGAATTTTCTGTTCCTGTTTTGCATTTGAAATACAAGTTTGGAGTTAAAAGC
CCATATTGTGTTTAACTCTTAGGCTTTGTCTTCTCTGTAAAAGGGTGATTCAGCTCTTTA
TCAGCACCACCACCCCTCCCGTACCCTCACCCTCCAAACAGGGAAATTTCCAAAGGCAGG
GAGCTTAATCTTTTCCTGTAACTCCTCTTAATTTCACCTATTCCGGTTCCTGCTGGAACT
TGAAATTCCTATGACAGTTTCAGTAATTTGAAATCCTGATGGCAGGAATCCTTTAAACTA
GATTTCAGGGTTCGCTGATGGCCTAGTGGAGCTTGGGGTCAGTCCCTGGCACGGGAATTT
CTACCTGCCATGGGCATGGCCAGAAAACAACAACAACAAAAACAAGGGAGGAAGAAAAAA
AATACAACAGTTGAGAATCCTGGGGTCCTGATTAGAAGCTGTCTTTCAGATTCCCCCTCA
CTAGAAAGAGAAACCTTGCCAGGCAGTCCTGCCACCGTTGCCATCCCTGGGACAGGGACA
TCTTGGGGACCCCTGCATCCCTAGGATGTATAGTCTACCCAGGACAGGGAGATCTCTAGG
ACCCCCACATGTGCAGGATGGACAGTCCACCTGGGACAGAGGGATCTCAGGGACCCCCCC
ACCCGACACCTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-494, gnl|bosTau2|chr6 (36566684-36566206) |
|
2-494, gnl|Hg17|chr4 (55429715-55430283) |
|
2-494, gnl|Mm7|chr5 (75054804-75055216) |
| |
|
667-838, gnl|bosTau2|chr6 (36565911-36565740) |
|
667-838, gnl|canFam2|chr13 (50106965-50107147) |
|
667-838, gnl|dasNov1|scaffold_54366 (14966-14791) |
|
667-838, gnl|hg17|chr4 (55430335-55430462) |
|
667-838, gnl|loxAfr1|scaffold_16307 (9298-9436) |
|
667-838, gnl|mm7|chr5 (75055279-75055362) |
|
667-838, gnl|oryCun1|scaffold_60860 (1552-1398) |
|
667-838, gnl|panTro1|chr3 (91227437-91227310) |
|
667-838, gnl|rheMac2|chr5 (74678994-74678865) |
|
667-838, gnl|rn3|chr14 (34921890-34921807) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-494, gnl|bosTau2|chr6 (36566684-36566206) |
|
2-494, gnl|Hg17|chr4 (55429715-55430283) |
|
2-494, gnl|Mm7|chr5 (75054804-75055216) |
| |
|
667-838, gnl|bosTau2|chr6 (36565911-36565740) |
|
667-838, gnl|canFam2|chr13 (50106965-50107147) |
|
667-838, gnl|dasNov1|scaffold_54366 (14966-14791) |
|
667-838, gnl|hg17|chr4 (55430335-55430462) |
|
667-838, gnl|loxAfr1|scaffold_16307 (9298-9436) |
|
667-838, gnl|mm7|chr5 (75055279-75055362) |
|
667-838, gnl|oryCun1|scaffold_60860 (1552-1398) |
|
667-838, gnl|panTro1|chr3 (91227437-91227310) |
|
667-838, gnl|rheMac2|chr5 (74678994-74678865) |
|
667-838, gnl|rn3|chr14 (34921890-34921807) |
