Ss1.1-Ova1-OVRM10159B11.5
|
AGTCGGCGTCCTCCCGCGGAGGGGTGTAAACAGGCGTCGCGGTGGCCCAGCTGCAGCCTT
GCTGCGTCCGCATCTCCCGCATGCTTCAGGCGGGCGGGGGCGACCCCGCAGCGAGCTCAA
AGCCCACCTGAGGTAACTCCTGCGGCCTCCAGTTCTGCTTTCCCGGTGCGGCGCGCTGCA
ATCGCTGCCCGCCGCTAAGGAGGCCGGCCGAGCCCCCGGCCACGGCAGGGGGTGTGGCTG
CCGGCTGTGCCTTCTGCGACAGGTGGGCCCATCAGGGCAGCTGCCCAGACCCGGGCTCCG
CACTGCCTTCCGCGGCAGAAAAGCGATAGCGACCCCGGGCCGTGGGTTCTTCCGCCCCGG
CTCTCTAAGGTTGCCCTTGGGCCAGGCCGAGCCGGAGCCGCAGGAGCCCTCGGGCGCTGA
GGGCCAGGAGCTGCCAGCGTGGAATCCCAGTTGAAGTCCTGCACCGGAGGGGCTGTGAGA
TCTTGGGCTAGTCAGCCCTCCCCTCGGCCTGAGTTTCCACATTTGAAAAATGAAAGTCTG
GACTAGGTGATTTGTGAGGACCTTCTCCTTCTGACGTGTGTGATCCTGAGAGAGACTTGC
ATACATGGGAAGCTGCCAGAGCGAAAGCATAGCTTGAAGTCCATGGCCCAAAATGACTCT
ACCATTGGAGACTTTCTTCCGTAAAGAGGAAGACCAGACAGGAGGTTGGGATGAGCATGC
CACTGCATCAGATCTCTGCCATTCCATCCCAGGATGCCACCTCTTCTAGAGTCTACAGAA
GTAAGACCAAAGAAAAGGAGAGGGAAGAGCAGAATGAGAAGACTTTGGGACATTCCATGA
GTCATTCAAGTAACATTTCTAAGGCTGGGGGTTCCTCGGTGGCATCTGCTCCAGTGTCAG
CCTTCTCTCGCACCTCTGTCACGCCCTCCAATCAGGACATCTGCAGGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGTCGGCGTCCTCCCGCGGAGGGGTGTAAACAGGCGTCGCGGTGGCCCAGCTGCAGCCTT
GCTGCGTCCGCATCTCCCGCATGCTTCAGGCGGGCGGGGGCGACCCCGCAGCGAGCTCAA
AGCCCACCTGAGGTAACTCCTGCGGCCTCCAGTTCTGCTTTCCCGGTGCGGCGCGCTGCA
ATCGCTGCCCGCCGCTAAGGAGGCCGGCCGAGCCCCCGGCCACGGCAGGGGGTGTGGCTG
CCGGCTGTGCCTTCTGCGACAGGTGGGCCCATCAGGGCAGCTGCCCAGACCCGGGCTCCG
CACTGCCTTCCGCGGCAGAAAAGCGATAGCGACCCCGGGCCGTGGGTTCTTCCGCCCCGG
CTCTCTAAGGTTGCCCTTGGGCCAGGCCGAGCCGGAGCCGCAGGAGCCCTCGGGCGCTGA
GGGCCAGGAGCTGCCAGCGTGGAATCCCAGTTGAAGTCCTGCACCGGAGGGGCTGTGAGA
TCTTGGGCTAGTCAGCCCTCCCCTCGGCCTGAGTTTCCACATTTGAAAAATGAAAGTCTG
GACTAGGTGATTTGTGAGGACCTTCTCCTTCTGACGTGTGTGATCCTGAGAGAGACTTGC
ATACATGGGAAGCTGCCAGAGCGAAAGCATAGCTTGAAGTCCATGGCCCAAAATGACTCT
ACCATTGGAGACTTTCTTCCGTAAAGAGGAAGACCAGACAGGAGGTTGGGATGAGCATGC
CACTGCATCAGATCTCTGCCATTCCATCCCAGGATGCCACCTCTTCTAGAGTCTACAGAA
GTAAGACCAAAGAAAAGGAGAGGGAAGAGCAGAATGAGAAGACTTTGGGACATTCCATGA
GTCATTCAAGTAACATTTCTAAGGCTGGGGGTTCCTCGGTGGCATCTGCTCCAGTGTCAG
CCTTCTCTCGCACCTCTGTCACGCCCTCCAATCAGGACATCTGCAGGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
2-637, gnl|bosTau2|chr28 (34370697-34370043) |
|
2-637, gnl|canFam2|chr28 (5006268-5005436) |
|
2-637, gnl|dasNov1|scaffold_29664 (49979-50672) |
|
2-637, gnl|echTel1|scaffold_276793 (155-915) |
|
2-637, gnl|hg17|chr10 (45409605-45410450) |
|
2-637, gnl|Hg17|chr10 (45410360-45409684) |
|
2-637, gnl|loxAfr1|scaffold_4910 (10998-10166) |
|
2-637, gnl|mm7|chr6 (116364245-116363603) |
|
2-637, gnl|panTro1|chr8 (46348038-46348880) |
|
2-637, gnl|rheMac2|chr9 (45955744-45956557) |
|
2-637, gnl|rn3|chr4 (152740188-152739539) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-637, gnl|bosTau2|chr28 (34370697-34370043) |
|
2-637, gnl|canFam2|chr28 (5006268-5005436) |
|
2-637, gnl|dasNov1|scaffold_29664 (49979-50672) |
|
2-637, gnl|echTel1|scaffold_276793 (155-915) |
|
2-637, gnl|hg17|chr10 (45409605-45410450) |
|
2-637, gnl|Hg17|chr10 (45410360-45409684) |
|
2-637, gnl|loxAfr1|scaffold_4910 (10998-10166) |
|
2-637, gnl|mm7|chr6 (116364245-116363603) |
|
2-637, gnl|panTro1|chr8 (46348038-46348880) |
|
2-637, gnl|rheMac2|chr9 (45955744-45956557) |
|
2-637, gnl|rn3|chr4 (152740188-152739539) |
