Non-Coding RNA Search

Ss1.1-Ova1-OVRM10162C02.5

Sequence:


               
               GTAGTTTTCTTTCTGGGACCCTTCAAAAAGCCTGCTTAGAGATGAAAGGTTGTTATTTTT
ATTTATTTATTC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
TGCTGTGCAGGAGCTCCCCATTACTGTATCAGCTTTAAAAGATCATAAGAAAGAAACCTG
GAGGAATTCACCCATAAACCACTATCCTTGTGGTAATTATTTTCATGTCTTTGGGTTTCC
TTCCAAACTATCCAAATGCACATCATTTTTATGGAATTGTAATTATGGAGCACATGTACA
ATTTGTGTTCTGTATTTCCCCATTTATTTTATAAATTCTTTTCCTTGGTAAGCATGGTAT
ATTATGGTGGTGGTATGATAATCCCATGGAGCCTAATTATGCAACTTGAGTCCTAATTGT
ATAGAGACCTTTCCTCCAGATACACCAAGGAATGTCCCTGCCTTCTTCCAGATGCACCTA
CGAGAACCTTGCTGCTCAGAATGAGGCTGCTCAGCCTCCTTCTGAGATATAGAGCTCTCT
CTGTGGTATAAAGGCTGAAGCCAGGACAGGCTGGCTTGGGGTACACTCCACACTCCCTGG
GCCTGCCCCAAAGTGGGCACTGTTGGTATTCTCTCAAGATTATGATGCTGGCAAATGTGT
GACACCAGTGAGTGCTCAGGCCTCTAATTCCACCCAGGCAACTAGGAGATCCCCTGTCAG
GACCCAAGTGGTTAGAGGCAGGAGCTGTGAACCCCAAAGTGAAGAAGACTCAGAAGTTGC
AAAGGAGATTAGTGTACATGCTTGATAGGTAAGAATTCTTACCAAATATGGTGGCAGCCA
CTAGGAAATCAGAGATAAACTAAGCACTGCCTCTGCTTATGAGGTGCTTGCAGATGAGAG
GATAACACAGGGCTTTCTTATAGGTGATTACACTTCATTTTTGCACCAATGATGGTTCTT
ATTGCCGTTTTACAGGTGAGAAGACCAGAGTATAGTGAGACAAAGAGAATTGTTGAGGGC
CAAATAACTTATGTAGTGAACCAGGTAGCCTAACTTTGCGATCTTTCCAAGGCAATGGAA
TACATTATTTCTGAATTTGAAATTTCTGGGTCCCAGTATCTGTATAACACTTCACTATTT
TATATGCTCCTGAGGGAAAGCAAGGTTGATTTTTTTTTTTTTTTTAAGGGCTGCACCCAC
GGTAACTTTTTCTTTTTATAAATCGATTTTTAAAGTCTTGGCTTTAATTTCCTTGTTCTG
GCATGTTTGCATATCATAATGTTTGGGACCTAGATGATATCACACTGGGATAAAGCAGTA
AAGTAAAAGAAAGTCATGCTGGAAAGCTCTCTGATCCTCACTGGTTTCAAAACAAAATAT
GAGGGAAACAAAATGACAAGAAGTTGAGCCCTTGAATCTTTACACACATGAGAGAAAACC
AACAAAAAATGAGGATAGCATATCCTGAGTCTCTTACTAATTTAATTGGTGTGACCAGCA
TTTGATGTTGACAGCAATTTAGCATAATATTACTTGGTAACAGAATGACTTGGACAGTAT
TATTGTCTGAGTCTAAAAACTTTTCAACAACAACCAAAAAATGAGGATGTTTAGTGTCCC
AATTAGAAACAGACTTTCGTTACAGCACATTTTGGATTTGAACGTAGAAGCATCTTATTT
AGCTTTTTTGGAGTATGAATGAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGTTTTCTTTCTGGGACCCTTCAAAAAGCCTGCTTAGAGATGAAAGGTTGTTATTTTT
ATTTATTTATTC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
TGCTGTGCAGGAGCTCCCCATTACTGTATCAGCTTTAAAAGATCATAAGAAAGAAACCTG
GAGGAATTCACCCATAAACCACTATCCTTGTGGTAATTATTTTCATGTCTTTGGGTTTCC
TTCCAAACTATCCAAATGCACATCATTTTTATGGAATTGTAATTATGGAGCACATGTACA
ATTTGTGTTCTGTATTTCCCCATTTATTTTATAAATTCTTTTCCTTGGTAAGCATGGTAT
ATTATGGTGGTGGTATGATAATCCCATGGAGCCTAATTATGCAACTTGAGTCCTAATTGT
ATAGAGACCTTTCCTCCAGATACACCAAGGAATGTCCCTGCCTTCTTCCAGATGCACCTA
CGAGAACCTTGCTGCTCAGAATGAGGCTGCTCAGCCTCCTTCTGAGATATAGAGCTCTCT
CTGTGGTATAAAGGCTGAAGCCAGGACAGGCTGGCTTGGGGTACACTCCACACTCCCTGG
GCCTGCCCCAAAGTGGGCACTGTTGGTATTCTCTCAAGATTATGATGCTGGCAAATGTGT
GACACCAGTGAGTGCTCAGGCCTCTAATTCCACCCAGGCAACTAGGAGATCCCCTGTCAG
GACCCAAGTGGTTAGAGGCAGGAGCTGTGAACCCCAAAGTGAAGAAGACTCAGAAGTTGC
AAAGGAGATTAGTGTACATGCTTGATAGGTAAGAATTCTTACCAAATATGGTGGCAGCCA
CTAGGAAATCAGAGATAAACTAAGCACTGCCTCTGCTTATGAGGTGCTTGCAGATGAGAG
GATAACACAGGGCTTTCTTATAGGTGATTACACTTCATTTTTGCACCAATGATGGTTCTT
ATTGCCGTTTTACAGGTGAGAAGACCAGAGTATAGTGAGACAAAGAGAATTGTTGAGGGC
CAAATAACTTATGTAGTGAACCAGGTAGCCTAACTTTGCGATCTTTCCAAGGCAATGGAA
TACATTATTTCTGAATTTGAAATTTCTGGGTCCCAGTATCTGTATAACACTTCACTATTT
TATATGCTCCTGAGGGAAAGCAAGGTTGATTTTTTTTTTTTTTTTAAGGGCTGCACCCAC
GGTAACTTTTTCTTTTTATAAATCGATTTTTAAAGTCTTGGCTTTAATTTCCTTGTTCTG
GCATGTTTGCATATCATAATGTTTGGGACCTAGATGATATCACACTGGGATAAAGCAGTA
AAGTAAAAGAAAGTCATGCTGGAAAGCTCTCTGATCCTCACTGGTTTCAAAACAAAATAT
GAGGGAAACAAAATGACAAGAAGTTGAGCCCTTGAATCTTTACACACATGAGAGAAAACC
AACAAAAAATGAGGATAGCATATCCTGAGTCTCTTACTAATTTAATTGGTGTGACCAGCA
TTTGATGTTGACAGCAATTTAGCATAATATTACTTGGTAACAGAATGACTTGGACAGTAT
TATTGTCTGAGTCTAAAAACTTTTCAACAACAACCAAAAAATGAGGATGTTTAGTGTCCC
AATTAGAAACAGACTTTCGTTACAGCACATTTTGGATTTGAACGTAGAAGCATCTTATTT
AGCTTTTTTGGAGTATGAATGAAG

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               91-526, gnl|bosTau2|chr10 (38181647-38181200)
               

               
               91-526, gnl|Mm7|chr9 (70247018-70247415)
               


               
               556-871, gnl|bosTau2|chr10 (38181193-38180873)
               

               
               556-871, gnl|Hg17|chr15 (57443787-57443463)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               91-526, gnl|bosTau2|chr10 (38181647-38181200)
               

               
               91-526, gnl|Mm7|chr9 (70247018-70247415)
               


               
               556-871, gnl|bosTau2|chr10 (38181193-38180873)
               

               
               556-871, gnl|Hg17|chr15 (57443787-57443463)

	91-526, gnl\|bosTau2\|chr10 (38181647-38181200)
	91-526, gnl\|Mm7\|chr9 (70247018-70247415)

	556-871, gnl\|bosTau2\|chr10 (38181193-38180873)
	556-871, gnl\|Hg17\|chr15 (57443787-57443463)