Ss1.1-Ova1-OVRM10171C09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAATCGCTCGGCCTCCCCCATCCCCCGGTAACGGTCGCTGGTGAGTTTAAATGAGCCGG GGCTGGCCGGGCCGGAGCCGCTACGGGGGGGGGCCTGAGGCACTGCAGAAAGTGGGCCTG AGCCTCAAGGATGACGGTGCTGCAGGAACCCGTCCAGGCTGCTATATGGCAAGCACTAAA CCACTATGCTTACAGAGATGCAGTTTTCCTCGCAGAACGACTATATGCAGAAGTACACTC AGAAGAAGCCTTGTTTTTACTGGCAACCTGTTATTACCGCTCAGGAAAAGCATATAAAGC ATATAGACTCTTGAAAGGACACAGTTGTACAACACCGCAATGTAAATACCTGCTTGCAAA ATGTTGTGTCGATCTCAGCAAGCTTGCAGAAGGGGAACAGATCTTATCTGGTGGAGTGTT TAATAAGCAGAAAAGCTATGATGACATTGTAACTGAGTTTGGTGATTCTGCTTGTTTTAC TCTTTCATTGTTGGGACATGTATATTGCAAGACAGATCGACTTGCCAAAGGATCAGAATG TTACCAAAAGAGCCTTATTTTAAATCCTTTCCTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAATCGCTCGGCCTCCCCCATCCCCCGGTAACGGTCGCTGGTGAGTTTAAATGAGCCGG GGCTGGCCGGGCCGGAGCCGCTACGGGGGGGGGCCTGAGGCACTGCAGAAAGTGGGCCTG AGCCTCAAGGATGACGGTGCTGCAGGAACCCGTCCAGGCTGCTATATGGCAAGCACTAAA CCACTATGCTTACAGAGATGCAGTTTTCCTCGCAGAACGACTATATGCAGAAGTACACTC AGAAGAAGCCTTGTTTTTACTGGCAACCTGTTATTACCGCTCAGGAAAAGCATATAAAGC ATATAGACTCTTGAAAGGACACAGTTGTACAACACCGCAATGTAAATACCTGCTTGCAAA ATGTTGTGTCGATCTCAGCAAGCTTGCAGAAGGGGAACAGATCTTATCTGGTGGAGTGTT TAATAAGCAGAAAAGCTATGATGACATTGTAACTGAGTTTGGTGATTCTGCTTGTTTTAC TCTTTCATTGTTGGGACATGTATATTGCAAGACAGATCGACTTGCCAAAGGATCAGAATG TTACCAAAAGAGCCTTATTTTAAATCCTTTCCTCTG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 5-123, + strand, RNAz p=0.669837 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 5-123, + strand, RNAz p=0.669837 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of U00001, + |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 5-158, gnl|bosTau2|chr19 (41648095-41648247) | |
| 5-158, gnl|Hg17|chr17 (42621662-42621510) | |
| 5-158, gnl|Mm7|chr11 (104659555-104659403) | |
| 232-382, gnl|bosTau2|chr19 (41669629-41669779) | |
| 232-382, gnl|canFam2|chr9 (12386360-12386212) | |
| 232-382, gnl|canFam2|chr9 (12386365-12386199) | |
| 232-382, gnl|canFam2|chr9 (12386210-12386359) | |
| 232-382, gnl|danRer3|chr3 (12579773-12579921) | |
| 232-382, gnl|danRer3|chr3 (12579768-12579939) | |
| 232-382, gnl|danRer3|chr3 (15399247-15399098) | |
| 232-382, gnl|dasNov1|scaffold_60344 (8633-8781) | |
| 232-382, gnl|dasNov1|scaffold_60344 (8628-8794) | |
| 232-382, gnl|dasNov1|scaffold_60344 (8783-8634) | |
| 232-382, gnl|echTel1|scaffold_319102 (42587-42735) | |
| 232-382, gnl|echTel1|scaffold_319102 (42582-42748) | |
| 232-382, gnl|echTel1|scaffold_319102 (42737-42588) | |
| 232-382, gnl|fr1|chrUn (315553844-315553654) | |
| 232-382, gnl|fr1|chrUn (315553807-315553642) | |
| 232-382, gnl|fr1|chrUn (315553652-315553801) | |
| 232-382, gnl|galGal2|chr27 (1303748-1303600) | |
| 232-382, gnl|galGal2|chr27 (1303753-1303594) | |
| 232-382, gnl|galGal2|chr27 (1303598-1303747) | |
| 232-382, gnl|hg17|chr17 (42604277-42604443) | |
| 232-382, gnl|Hg17|chr17 (42604431-42604281) | |
| 232-382, gnl|hg17|chr2 (132852595-132852744) | |
| 232-382, gnl|hg17|chrY (10623018-10623166) | |
| 232-382, gnl|loxAfr1|scaffold_43541 (11571-11719) | |
| 232-382, gnl|loxAfr1|scaffold_43541 (11566-11732) | |
| 232-382, gnl|loxAfr1|scaffold_43541 (11721-11572) | |
| 232-382, gnl|mm7|chr11 (104643779-104643927) | |
| 232-382, gnl|mm7|chr11 (104643774-104643933) | |
| 232-382, gnl|mm7|chr11 (104643927-104643780) | |
| 232-382, gnl|Mm7|chr11 (104643928-104643778) | |
| 232-382, gnl|monDom2|scaffold_18 (38881921-38881773) | |
| 232-382, gnl|monDom2|scaffold_18 (38881926-38881767) | |
| 232-382, gnl|monDom2|scaffold_18 (38881771-38881920) | |
| 232-382, gnl|oryCun1|scaffold_175869 (47186-47038) | |
| 232-382, gnl|oryCun1|scaffold_175869 (47191-47025) | |
| 232-382, gnl|oryCun1|scaffold_175869 (47038-47185) | |
| 232-382, gnl|panTro1|chr19 (62515618-62515452) | |
| 232-382, gnl|panTro1|chrY (9671419-9671566) | |
| 232-382, gnl|panTro1|chrY (9671568-9671420) | |
| 232-382, gnl|rheMac2|chr16 (57246745-57246893) | |
| 232-382, gnl|rheMac2|chr16 (57246740-57246906) | |
| 232-382, gnl|rheMac2|chr16 (57246893-57246746) | |
| 232-382, gnl|rn3|chr10 (93724035-93724183) | |
| 232-382, gnl|rn3|chr10 (93724030-93724189) | |
| 232-382, gnl|rn3|chr10 (93724183-93724036) | |
| 232-382, gnl|tetNig1|chrUn_random (111580475-111580623) | |
| 232-382, gnl|tetNig1|chrUn_random (111580470-111580635) | |
| 232-382, gnl|tetNig1|chrUn_random (111580625-111580476) | |
| 232-382, gnl|xenTro1|scaffold_221 (1380566-1380418) | |
| 232-382, gnl|xenTro1|scaffold_221 (1380571-1380412) | |
| 232-382, gnl|xenTro1|scaffold_221 (1380416-1380565) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-158, gnl|bosTau2|chr19 (41648095-41648247) | |
| 5-158, gnl|Hg17|chr17 (42621662-42621510) | |
| 5-158, gnl|Mm7|chr11 (104659555-104659403) | |
| 232-382, gnl|bosTau2|chr19 (41669629-41669779) | |
| 232-382, gnl|canFam2|chr9 (12386360-12386212) | |
| 232-382, gnl|canFam2|chr9 (12386365-12386199) | |
| 232-382, gnl|canFam2|chr9 (12386210-12386359) | |
| 232-382, gnl|danRer3|chr3 (12579773-12579921) | |
| 232-382, gnl|danRer3|chr3 (12579768-12579939) | |
| 232-382, gnl|danRer3|chr3 (15399247-15399098) | |
| 232-382, gnl|dasNov1|scaffold_60344 (8633-8781) | |
| 232-382, gnl|dasNov1|scaffold_60344 (8628-8794) | |
| 232-382, gnl|dasNov1|scaffold_60344 (8783-8634) | |
| 232-382, gnl|echTel1|scaffold_319102 (42587-42735) | |
| 232-382, gnl|echTel1|scaffold_319102 (42582-42748) | |
| 232-382, gnl|echTel1|scaffold_319102 (42737-42588) | |
| 232-382, gnl|fr1|chrUn (315553844-315553654) | |
| 232-382, gnl|fr1|chrUn (315553807-315553642) | |
| 232-382, gnl|fr1|chrUn (315553652-315553801) | |
| 232-382, gnl|galGal2|chr27 (1303748-1303600) | |
| 232-382, gnl|galGal2|chr27 (1303753-1303594) | |
| 232-382, gnl|galGal2|chr27 (1303598-1303747) | |
| 232-382, gnl|hg17|chr17 (42604277-42604443) | |
| 232-382, gnl|Hg17|chr17 (42604431-42604281) | |
| 232-382, gnl|hg17|chr2 (132852595-132852744) | |
| 232-382, gnl|hg17|chrY (10623018-10623166) | |
| 232-382, gnl|loxAfr1|scaffold_43541 (11571-11719) | |
| 232-382, gnl|loxAfr1|scaffold_43541 (11566-11732) | |
| 232-382, gnl|loxAfr1|scaffold_43541 (11721-11572) | |
| 232-382, gnl|mm7|chr11 (104643779-104643927) | |
| 232-382, gnl|mm7|chr11 (104643774-104643933) | |
| 232-382, gnl|mm7|chr11 (104643927-104643780) | |
| 232-382, gnl|Mm7|chr11 (104643928-104643778) | |
| 232-382, gnl|monDom2|scaffold_18 (38881921-38881773) | |
| 232-382, gnl|monDom2|scaffold_18 (38881926-38881767) | |
| 232-382, gnl|monDom2|scaffold_18 (38881771-38881920) | |
| 232-382, gnl|oryCun1|scaffold_175869 (47186-47038) | |
| 232-382, gnl|oryCun1|scaffold_175869 (47191-47025) | |
| 232-382, gnl|oryCun1|scaffold_175869 (47038-47185) | |
| 232-382, gnl|panTro1|chr19 (62515618-62515452) | |
| 232-382, gnl|panTro1|chrY (9671419-9671566) | |
| 232-382, gnl|panTro1|chrY (9671568-9671420) | |
| 232-382, gnl|rheMac2|chr16 (57246745-57246893) | |
| 232-382, gnl|rheMac2|chr16 (57246740-57246906) | |
| 232-382, gnl|rheMac2|chr16 (57246893-57246746) | |
| 232-382, gnl|rn3|chr10 (93724035-93724183) | |
| 232-382, gnl|rn3|chr10 (93724030-93724189) | |
| 232-382, gnl|rn3|chr10 (93724183-93724036) | |
| 232-382, gnl|tetNig1|chrUn_random (111580475-111580623) | |
| 232-382, gnl|tetNig1|chrUn_random (111580470-111580635) | |
| 232-382, gnl|tetNig1|chrUn_random (111580625-111580476) | |
| 232-382, gnl|xenTro1|scaffold_221 (1380566-1380418) | |
| 232-382, gnl|xenTro1|scaffold_221 (1380571-1380412) | |
| 232-382, gnl|xenTro1|scaffold_221 (1380416-1380565) |