Ss1.1-Ova1-OVRM10173H07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGACTCACTGCATTCCATTTGGGCTGGGAGGTCCTGCGTGGGTTTGGGGTAGGGACCGGC TCTGGCCAGAGTGGAGTAGAGAGAATGAGTGATGACTGCAGAGTTTCTCCCGTGTGGGAG CCGCTTCTTCCTTTACCTGTTCTCAGGGCAGATTGTGACATCACAGTCTGGAGTTATCAC CATCCTCTGACAGTCATGCGGAGGAACCCCTTTGGCGTGGACATCTGCTGTCGGAAGGGG TCTCGAAGCCCCCTGCAGGAACTCTACAACCCGACCCAGCTGGACCTCTCCAATACGGCC GTCCTGCACCAGATGCGCCGGGACCAGGTCACAGACACGTGCCGGGCCAGCAGCGCCATG AGCCGCAAGCGGCGGGTGCTGACCCCCAACGACCTCAAGCACCTGGTGGTGGACGAAGAC CACGAGCTCATCTACTGCTACGTGCCCAAGGTGGCGTGCACCAACTGGAAGCGGCTCATG ATGGTCCTGACCGGGCGCGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAATGAGGCG CACGTGTCGGCCAACCTGAAGACCCTGAACCAGTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGACTCACTGCATTCCATTTGGGCTGGGAGGTCCTGCGTGGGTTTGGGGTAGGGACCGGC TCTGGCCAGAGTGGAGTAGAGAGAATGAGTGATGACTGCAGAGTTTCTCCCGTGTGGGAG CCGCTTCTTCCTTTACCTGTTCTCAGGGCAGATTGTGACATCACAGTCTGGAGTTATCAC CATCCTCTGACAGTCATGCGGAGGAACCCCTTTGGCGTGGACATCTGCTGTCGGAAGGGG TCTCGAAGCCCCCTGCAGGAACTCTACAACCCGACCCAGCTGGACCTCTCCAATACGGCC GTCCTGCACCAGATGCGCCGGGACCAGGTCACAGACACGTGCCGGGCCAGCAGCGCCATG AGCCGCAAGCGGCGGGTGCTGACCCCCAACGACCTCAAGCACCTGGTGGTGGACGAAGAC CACGAGCTCATCTACTGCTACGTGCCCAAGGTGGCGTGCACCAACTGGAAGCGGCTCATG ATGGTCCTGACCGGGCGCGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAATGAGGCG CACGTGTCGGCCAACCTGAAGACCCTGAACCAGTAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 356-475, + strand, RNAz p=0.846194 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 356-475, + strand, RNAz p=0.846194 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 7-193, gnl|bosTau2|chr2 (19474342-19474148) | |
| 7-193, gnl|Hg17|chr12 (103445386-103445595) | |
| 7-193, gnl|Mm7|chr10 (82600495-82600654) | |
| 277-576, gnl|bosTau2|chr2 (19277864-19277565) | |
| 277-576, gnl|Hg17|chr12 (103653191-103653490) | |
| 277-576, gnl|Mm7|chr10 (82732448-82732747) | |
| 389-490, gnl|bosTau2|chr25 (39134803-39134702) | |
| 389-490, gnl|canFam2|chr6 (17715423-17715338) | |
| 389-490, gnl|danRer3|chr3 (36140667-36140582) | |
| 389-490, gnl|dasNov1|scaffold_228822 (681-763) | |
| 389-490, gnl|echTel1|scaffold_120562 (648-733) | |
| 389-490, gnl|fr1|chrUn (13738536-13738709) | |
| 389-490, gnl|galGal2|chr14 (5307439-5307524) | |
| 389-490, gnl|hg17|chr7 (2245961-2246046) | |
| 389-490, gnl|Hg17|chr7 (2245970-2246071) | |
| 389-490, gnl|loxAfr1|scaffold_94592 (4014-3929) | |
| 389-490, gnl|mm7|chr5 (139495038-139495123) | |
| 389-490, gnl|Mm7|chr5 (139495047-139495148) | |
| 389-490, gnl|monDom2|scaffold_17 (116925-117010) | |
| 389-490, gnl|panTro1|chr6 (2454425-2454510) | |
| 389-490, gnl|rheMac2|chr3 (40437247-40437332) | |
| 389-490, gnl|rn3|chr12 (14608442-14608357) | |
| 389-490, gnl|tetNig1|chr18 (8299232-8299318) | |
| 389-490, gnl|xenTro1|scaffold_90 (1093109-1093024) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 7-193, gnl|bosTau2|chr2 (19474342-19474148) | |
| 7-193, gnl|Hg17|chr12 (103445386-103445595) | |
| 7-193, gnl|Mm7|chr10 (82600495-82600654) | |
| 277-576, gnl|bosTau2|chr2 (19277864-19277565) | |
| 277-576, gnl|Hg17|chr12 (103653191-103653490) | |
| 277-576, gnl|Mm7|chr10 (82732448-82732747) | |
| 389-490, gnl|bosTau2|chr25 (39134803-39134702) | |
| 389-490, gnl|canFam2|chr6 (17715423-17715338) | |
| 389-490, gnl|danRer3|chr3 (36140667-36140582) | |
| 389-490, gnl|dasNov1|scaffold_228822 (681-763) | |
| 389-490, gnl|echTel1|scaffold_120562 (648-733) | |
| 389-490, gnl|fr1|chrUn (13738536-13738709) | |
| 389-490, gnl|galGal2|chr14 (5307439-5307524) | |
| 389-490, gnl|hg17|chr7 (2245961-2246046) | |
| 389-490, gnl|Hg17|chr7 (2245970-2246071) | |
| 389-490, gnl|loxAfr1|scaffold_94592 (4014-3929) | |
| 389-490, gnl|mm7|chr5 (139495038-139495123) | |
| 389-490, gnl|Mm7|chr5 (139495047-139495148) | |
| 389-490, gnl|monDom2|scaffold_17 (116925-117010) | |
| 389-490, gnl|panTro1|chr6 (2454425-2454510) | |
| 389-490, gnl|rheMac2|chr3 (40437247-40437332) | |
| 389-490, gnl|rn3|chr12 (14608442-14608357) | |
| 389-490, gnl|tetNig1|chr18 (8299232-8299318) | |
| 389-490, gnl|xenTro1|scaffold_90 (1093109-1093024) |