Ss1.1-Ova1-OVRM10175G06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTAGCGTCGGGGCTGGCGCGCGCGGCGAATCTTAACATCGCGCTGTTTGCCGGCGCCTC TGGGCCACCAGTTTCCTTACCTTCCACCCTGGCGCCCCCCAGTCCTGGCTCCCCAGCCTC GCTGCCCCGGGCGTCCACGCCCTGCGGGCTCAGCGGGCTCAATCTGCGCAGCTCCTCCTC CATGTTGACTAAGCCTCTGCAGGGGCTGCCCGTGGCCCCCATGACCCCCACGCCGCCGCC AGGAGGCAAGGATCGAGAAGCGTTCGAGGCCGAGTACCGACTCGGCCCCCTCCTGGGTAA GGGGGGCTTTGGCACCGTCTTCGCAGGACATCGCGTCACAGACCGACTCCAGGTGGCCAT CAAAGTGATCCCCCGGAATCGCGTGCTGGGCTGGTCCCCCTTGTCAGATTCAGTCACGTG CCCACTGGAAGTGGCACTGTTATGGAAGGTGGGTGCAGGCGGTGGACACCCTGGTGTGAT CCGCCTGCTTGACTGGTTTGAGACACCAGAGGGCTTCATGCTGGTCCTCGAGCGGCCTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTAGCGTCGGGGCTGGCGCGCGCGGCGAATCTTAACATCGCGCTGTTTGCCGGCGCCTC TGGGCCACCAGTTTCCTTACCTTCCACCCTGGCGCCCCCCAGTCCTGGCTCCCCAGCCTC GCTGCCCCGGGCGTCCACGCCCTGCGGGCTCAGCGGGCTCAATCTGCGCAGCTCCTCCTC CATGTTGACTAAGCCTCTGCAGGGGCTGCCCGTGGCCCCCATGACCCCCACGCCGCCGCC AGGAGGCAAGGATCGAGAAGCGTTCGAGGCCGAGTACCGACTCGGCCCCCTCCTGGGTAA GGGGGGCTTTGGCACCGTCTTCGCAGGACATCGCGTCACAGACCGACTCCAGGTGGCCAT CAAAGTGATCCCCCGGAATCGCGTGCTGGGCTGGTCCCCCTTGTCAGATTCAGTCACGTG CCCACTGGAAGTGGCACTGTTATGGAAGGTGGGTGCAGGCGGTGGACACCCTGGTGTGAT CCGCCTGCTTGACTGGTTTGAGACACCAGAGGGCTTCATGCTGGTCCTCGAGCGGCCTCT |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 40-156, + strand, RNAz p=0.855845 | |
| 396-504, + strand, RNAz p=0.963629 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 40-156, + strand, RNAz p=0.855845 | |
| 396-504, + strand, RNAz p=0.963629 |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 1-243, gnl|bosTau2|chrX (26202247-26202489) | |
| 1-243, gnl|canFam2|chrX (42027243-42027430) | |
| 1-243, gnl|echTel1|scaffold_323080 (119860-119674) | |
| 1-243, gnl|hg17|chrX (48532263-48532460) | |
| 1-243, gnl|Hg17|chrX (48532549-48532298) | |
| 1-243, gnl|loxAfr1|scaffold_25999 (1269-1081) | |
| 1-243, gnl|mm7|chrX (6311744-6311547) | |
| 1-243, gnl|Mm7|chrX (6311456-6311707) | |
| 1-243, gnl|monDom2|scaffold_134 (200944-200731) | |
| 1-243, gnl|oryCun1|scaffold_190599 (75164-74967) | |
| 1-243, gnl|rheMac2|chrX (46775769-46775966) | |
| 1-243, gnl|rn3|chrX (26710594-26710791) | |
| 396-540, gnl|bosTau2|chrX (26205671-26205815) | |
| 396-540, gnl|canFam2|chrX (42024140-42024520) | |
| 396-540, gnl|danRer3|chrNA (38171765-38171374) | |
| 396-540, gnl|dasNov1|scaffold_170637 (228-614) | |
| 396-540, gnl|echTel1|scaffold_323080 (123020-122640) | |
| 396-540, gnl|fr1|chrUn (281772150-281771771) | |
| 396-540, gnl|galGal2|chr32 (820554-820188) | |
| 396-540, gnl|hg17|chrX (48528541-48528931) | |
| 396-540, gnl|Hg17|chrX (48528937-48528781) | |
| 396-540, gnl|loxAfr1|scaffold_25999 (4449-4069) | |
| 396-540, gnl|mm7|chrX (6314776-6314394) | |
| 396-540, gnl|Mm7|chrX (6314390-6314534) | |
| 396-540, gnl|monDom2|scaffold_134 (202201-201806) | |
| 396-540, gnl|oryCun1|scaffold_190599 (78222-77832) | |
| 396-540, gnl|panTro1|chrX (49863727-49864117) | |
| 396-540, gnl|rheMac2|chrX (46772287-46772677) | |
| 396-540, gnl|rn3|chrX (26707504-26707885) | |
| 396-540, gnl|tetNig1|chrUn_random (79809839-79810187) | |
| 396-540, gnl|xenTro1|scaffold_72 (2620135-2620520) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-243, gnl|bosTau2|chrX (26202247-26202489) | |
| 1-243, gnl|canFam2|chrX (42027243-42027430) | |
| 1-243, gnl|echTel1|scaffold_323080 (119860-119674) | |
| 1-243, gnl|hg17|chrX (48532263-48532460) | |
| 1-243, gnl|Hg17|chrX (48532549-48532298) | |
| 1-243, gnl|loxAfr1|scaffold_25999 (1269-1081) | |
| 1-243, gnl|mm7|chrX (6311744-6311547) | |
| 1-243, gnl|Mm7|chrX (6311456-6311707) | |
| 1-243, gnl|monDom2|scaffold_134 (200944-200731) | |
| 1-243, gnl|oryCun1|scaffold_190599 (75164-74967) | |
| 1-243, gnl|rheMac2|chrX (46775769-46775966) | |
| 1-243, gnl|rn3|chrX (26710594-26710791) | |
| 396-540, gnl|bosTau2|chrX (26205671-26205815) | |
| 396-540, gnl|canFam2|chrX (42024140-42024520) | |
| 396-540, gnl|danRer3|chrNA (38171765-38171374) | |
| 396-540, gnl|dasNov1|scaffold_170637 (228-614) | |
| 396-540, gnl|echTel1|scaffold_323080 (123020-122640) | |
| 396-540, gnl|fr1|chrUn (281772150-281771771) | |
| 396-540, gnl|galGal2|chr32 (820554-820188) | |
| 396-540, gnl|hg17|chrX (48528541-48528931) | |
| 396-540, gnl|Hg17|chrX (48528937-48528781) | |
| 396-540, gnl|loxAfr1|scaffold_25999 (4449-4069) | |
| 396-540, gnl|mm7|chrX (6314776-6314394) | |
| 396-540, gnl|Mm7|chrX (6314390-6314534) | |
| 396-540, gnl|monDom2|scaffold_134 (202201-201806) | |
| 396-540, gnl|oryCun1|scaffold_190599 (78222-77832) | |
| 396-540, gnl|panTro1|chrX (49863727-49864117) | |
| 396-540, gnl|rheMac2|chrX (46772287-46772677) | |
| 396-540, gnl|rn3|chrX (26707504-26707885) | |
| 396-540, gnl|tetNig1|chrUn_random (79809839-79810187) | |
| 396-540, gnl|xenTro1|scaffold_72 (2620135-2620520) |