Ss1.1-Ova1-OVRM10182C08.5
|
ACGGTTCCCTGCCAGATCTCTTTGGAACTGTCCTACCTACAGGCGGTTTACTTCTTCCAG
TCAACATGCCGATTTTAGAAGCTCCCGAAGAGAGGCTGAGAAAATTTAAGTATCGTGGCA
AAGATGCATCGGGAGGCGGCAGCAGAGGCTAGCGGTCAGCCTGGAGCTCCGGAAGGCCAA
GAAGGATGAGCAGGCCCTCAAGAGAAGAAACATCACCACTGCCTCTGACCCTTTTGTACA
GCAGACCAAAGGGGCCAAACTCACCCTGCAAGAAATAATCCATGGTGTGAATGCCTCAGA
TCCAGAACAGTGTTTCCAGGCCACCCAGGCAGCCAGGAAAATGCTGTCCCAGGAGAGGAA
TCCTCCTCTGAAGCTGATGGTGGAAGCAGGGCTCATTCCCAGACTGGTGCAGTTGCTGAG
GTCCTCCCTGCACCCCTGCCTGCAGTTTGAGGCCGCCTGGGCTCTGACCAACATTGCCTC
GGGGGCTTCGGAGCTGACTCGCGCTGTCGTGGAGGGGGGCGCCATCCAGCCCTTGGTGGA
GCTGCTGGCTTCCTCGCATATGACCGTGTGTGAACAGGCAGTGTGGGCCCTTGGTAATAT
TGCATGTGATGGCGCATACTTCACAGACATCGGTATCTCCAGCATTGCCATCCCACATCT
GCTGGCCCTGGCTTCCTCAAATGTACCAGTCACATTCCTACGGAACATTGTCTGGACCTT
GTCCAACCTGTGCCGGAACAAGAACCCATGCCCCTGTGATAACGCGGTGAAGCAGATGTT
GCCCGTCCTCTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACGGTTCCCTGCCAGATCTCTTTGGAACTGTCCTACCTACAGGCGGTTTACTTCTTCCAG
TCAACATGCCGATTTTAGAAGCTCCCGAAGAGAGGCTGAGAAAATTTAAGTATCGTGGCA
AAGATGCATCGGGAGGCGGCAGCAGAGGCTAGCGGTCAGCCTGGAGCTCCGGAAGGCCAA
GAAGGATGAGCAGGCCCTCAAGAGAAGAAACATCACCACTGCCTCTGACCCTTTTGTACA
GCAGACCAAAGGGGCCAAACTCACCCTGCAAGAAATAATCCATGGTGTGAATGCCTCAGA
TCCAGAACAGTGTTTCCAGGCCACCCAGGCAGCCAGGAAAATGCTGTCCCAGGAGAGGAA
TCCTCCTCTGAAGCTGATGGTGGAAGCAGGGCTCATTCCCAGACTGGTGCAGTTGCTGAG
GTCCTCCCTGCACCCCTGCCTGCAGTTTGAGGCCGCCTGGGCTCTGACCAACATTGCCTC
GGGGGCTTCGGAGCTGACTCGCGCTGTCGTGGAGGGGGGCGCCATCCAGCCCTTGGTGGA
GCTGCTGGCTTCCTCGCATATGACCGTGTGTGAACAGGCAGTGTGGGCCCTTGGTAATAT
TGCATGTGATGGCGCATACTTCACAGACATCGGTATCTCCAGCATTGCCATCCCACATCT
GCTGGCCCTGGCTTCCTCAAATGTACCAGTCACATTCCTACGGAACATTGTCTGGACCTT
GTCCAACCTGTGCCGGAACAAGAACCCATGCCCCTGTGATAACGCGGTGAAGCAGATGTT
GCCCGTCCTCTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
29-292, gnl|bosTau2|chr24 (9385369-9385634) |
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29-292, gnl|Mm7|chr6 (82914279-82914022) |
| |
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335-609, gnl|bosTau2|chr25 (35024415-35024689) |
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335-609, gnl|canFam2|chr6 (13361449-13361129) |
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335-609, gnl|danRer3|chr3 (22278038-22277743) |
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335-609, gnl|dasNov1|scaffold_26032 (9763-9509) |
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335-609, gnl|echTel1|scaffold_277835 (49567-49834) |
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335-609, gnl|fr1|chrUn (120001426-120001743) |
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335-609, gnl|hg17|chr7 (98437337-98437657) |
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335-609, gnl|Hg17|chr7 (98437614-98437340) |
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335-609, gnl|loxAfr1|scaffold_24407 (18574-18890) |
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335-609, gnl|mm7|chr5 (144033565-144033871) |
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335-609, gnl|Mm7|chr5 (144033842-144033568) |
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335-609, gnl|monDom2|scaffold_17 (6466224-6466551) |
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335-609, gnl|oryCun1|scaffold_97960 (18245-18565) |
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335-609, gnl|panTro1|chr6 (100142990-100143310) |
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335-609, gnl|rheMac2|chr3 (46399715-46400034) |
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335-609, gnl|rn3|chr12 (9932706-9932390) |
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335-609, gnl|tetNig1|chr18 (5190529-5190182) |
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335-609, gnl|xenTro1|scaffold_48 (1661551-1661252) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
29-292, gnl|bosTau2|chr24 (9385369-9385634) |
|
29-292, gnl|Mm7|chr6 (82914279-82914022) |
| |
|
335-609, gnl|bosTau2|chr25 (35024415-35024689) |
|
335-609, gnl|canFam2|chr6 (13361449-13361129) |
|
335-609, gnl|danRer3|chr3 (22278038-22277743) |
|
335-609, gnl|dasNov1|scaffold_26032 (9763-9509) |
|
335-609, gnl|echTel1|scaffold_277835 (49567-49834) |
|
335-609, gnl|fr1|chrUn (120001426-120001743) |
|
335-609, gnl|hg17|chr7 (98437337-98437657) |
|
335-609, gnl|Hg17|chr7 (98437614-98437340) |
|
335-609, gnl|loxAfr1|scaffold_24407 (18574-18890) |
|
335-609, gnl|mm7|chr5 (144033565-144033871) |
|
335-609, gnl|Mm7|chr5 (144033842-144033568) |
|
335-609, gnl|monDom2|scaffold_17 (6466224-6466551) |
|
335-609, gnl|oryCun1|scaffold_97960 (18245-18565) |
|
335-609, gnl|panTro1|chr6 (100142990-100143310) |
|
335-609, gnl|rheMac2|chr3 (46399715-46400034) |
|
335-609, gnl|rn3|chr12 (9932706-9932390) |
|
335-609, gnl|tetNig1|chr18 (5190529-5190182) |
|
335-609, gnl|xenTro1|scaffold_48 (1661551-1661252) |
