Non-Coding RNA Search

Ss1.1-Ova1-OVRM10186C09.5

Sequence:


               
               ATTTAGCAAAGCTCAGGAGTGTTGGAGCTTATCTCATTATTTAAGTTAGATAAGGAGGAA
GGGGGACTCTGAAGGAAAAGGACAGATCTGTCTTTACGAACAGAGCCATCAGACTCTGAG
AATGTTCTGGAATCCCAGGACCCTTGTACGATACACGTAGACGTCAATCCCCGTTGCTCT
GAGAGCTTTGGAGTAACCTTTTGGTTGCTCTCACAGAAAAGACTGATGGTGAGCATATTC
GATTTCTTCAATGAAAACACTCCCAAGATGCCACCAAAAATTTGTTGGAAATTAATGGAG
ACTTTCCACTAATGGCCTCATAGATGTGAAAATGAAGTGGATTTTTTTTTTTTTTTTTTT
TAAGGAAAAGCTCTTTTTGTTACCCTGTTTGCATCTTACCCAAGATAAAAGGGTTAAGAC
CCCCATGAGTCATCAGAGTCTGAACGCTGTCAGGCTGGACAGGTGAGAAGGAAGTCAGCA
AAGGGATTTAGGAAAAGCATCCCCTGCTCTTAGTCCAGCAACCCTGCTGCTAACTGTTCT
GCTCTGAAAGCAGCCATTTATTTGCTCTTCTTGGTGTTACATATACCACATCAAGCAGAA
TTGGTTTGAGTCAAGCCTATAGGGAACTTTCAAAAGTAAAATAACTGATAAAAATTCACG
TTTGTTACAATATACAATACTCTCAATTTTTTCCACCAGTGTTCCCTCTAAGGCAGAGGA
GGGTGGACTGATACCCCACATAGCTGGAGGCCAATCAAGTTCAACATCTCTTGGAAAGTG
TCTCTTTTATCTTAAAGCTATAAGTGAATTTTACAGTTTATCCCATGTTGGTTTTAATAA
GGTACTATTTCTCATTATCCATTCAGAAAGATAGACCAGGTCATCCCATAGCCACTGCCT
CTTGCTCATTTAAGAAGTACAGGATACCCTTCTAGATGAGTTCCATAGACCCTCGTAGCA
CCGCTATAAAGACACAGTTACTGGTCCGGGTGAAAAGCAAGAGCCTAGCACAGGTTCGAC
CCCGAGGCTCTGTTTCTCATCTTGGGGCGCATCTATCTATCAACTTGGTCGCCATCTGCT
GCTGGGGGCAGCAAGTGCGTGAGGTGACATGTCACTTTTATCATGAGAAGGAATTCGATT
TCAGTGAAACTGAAAAATGAGTTTTGCATCTGACTGAAGGGAAGGGACTGTTTGTATCTG
TCCTGTTGTCCAAAGGGGGCTCCGTGGCTCTAGGGGAGCCCCTTTGTCCTCTCCTCGCCC
CTGGGTGTGCGCGCGAGGTGAGGGCCTAGTGTTCTCCTGATCTCGCCACACCAGGCCCTT
CCCAAGAACGCTGGAAGGCAGATGGATCCTTTCCCCTGCTCCTCCTGGCAAACCCAGAAG
CCACAGCAGCGCTCAGAGCTGCGTTAATGGGGTTCAGTGCCTCACTCGGGCCTGATGTTA
AGCTGATGAAGTTACAGGATACGGTATTTTTAAGAAACATCTTAACAATCCTTCCTGCCT
TTTAAGTTAAAATTCCTGTCACAGGAACACAAGCACAGAAAGCTTATTTAGTAAGACAGA
CTTCTTCCCTCTTGCTGAACCCTAAACACTGTGCTCCCCTTTCACTCAAAGGCTCCAGAC
GATGCATTGCTCATTATAACTTATGGAAAGCTCAAATCTGTGGATGGAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTAGCAAAGCTCAGGAGTGTTGGAGCTTATCTCATTATTTAAGTTAGATAAGGAGGAA
GGGGGACTCTGAAGGAAAAGGACAGATCTGTCTTTACGAACAGAGCCATCAGACTCTGAG
AATGTTCTGGAATCCCAGGACCCTTGTACGATACACGTAGACGTCAATCCCCGTTGCTCT
GAGAGCTTTGGAGTAACCTTTTGGTTGCTCTCACAGAAAAGACTGATGGTGAGCATATTC
GATTTCTTCAATGAAAACACTCCCAAGATGCCACCAAAAATTTGTTGGAAATTAATGGAG
ACTTTCCACTAATGGCCTCATAGATGTGAAAATGAAGTGGATTTTTTTTTTTTTTTTTTT
TAAGGAAAAGCTCTTTTTGTTACCCTGTTTGCATCTTACCCAAGATAAAAGGGTTAAGAC
CCCCATGAGTCATCAGAGTCTGAACGCTGTCAGGCTGGACAGGTGAGAAGGAAGTCAGCA
AAGGGATTTAGGAAAAGCATCCCCTGCTCTTAGTCCAGCAACCCTGCTGCTAACTGTTCT
GCTCTGAAAGCAGCCATTTATTTGCTCTTCTTGGTGTTACATATACCACATCAAGCAGAA
TTGGTTTGAGTCAAGCCTATAGGGAACTTTCAAAAGTAAAATAACTGATAAAAATTCACG
TTTGTTACAATATACAATACTCTCAATTTTTTCCACCAGTGTTCCCTCTAAGGCAGAGGA
GGGTGGACTGATACCCCACATAGCTGGAGGCCAATCAAGTTCAACATCTCTTGGAAAGTG
TCTCTTTTATCTTAAAGCTATAAGTGAATTTTACAGTTTATCCCATGTTGGTTTTAATAA
GGTACTATTTCTCATTATCCATTCAGAAAGATAGACCAGGTCATCCCATAGCCACTGCCT
CTTGCTCATTTAAGAAGTACAGGATACCCTTCTAGATGAGTTCCATAGACCCTCGTAGCA
CCGCTATAAAGACACAGTTACTGGTCCGGGTGAAAAGCAAGAGCCTAGCACAGGTTCGAC
CCCGAGGCTCTGTTTCTCATCTTGGGGCGCATCTATCTATCAACTTGGTCGCCATCTGCT
GCTGGGGGCAGCAAGTGCGTGAGGTGACATGTCACTTTTATCATGAGAAGGAATTCGATT
TCAGTGAAACTGAAAAATGAGTTTTGCATCTGACTGAAGGGAAGGGACTGTTTGTATCTG
TCCTGTTGTCCAAAGGGGGCTCCGTGGCTCTAGGGGAGCCCCTTTGTCCTCTCCTCGCCC
CTGGGTGTGCGCGCGAGGTGAGGGCCTAGTGTTCTCCTGATCTCGCCACACCAGGCCCTT
CCCAAGAACGCTGGAAGGCAGATGGATCCTTTCCCCTGCTCCTCCTGGCAAACCCAGAAG
CCACAGCAGCGCTCAGAGCTGCGTTAATGGGGTTCAGTGCCTCACTCGGGCCTGATGTTA
AGCTGATGAAGTTACAGGATACGGTATTTTTAAGAAACATCTTAACAATCCTTCCTGCCT
TTTAAGTTAAAATTCCTGTCACAGGAACACAAGCACAGAAAGCTTATTTAGTAAGACAGA
CTTCTTCCCTCTTGCTGAACCCTAAACACTGTGCTCCCCTTTCACTCAAAGGCTCCAGAC
GATGCATTGCTCATTATAACTTATGGAAAGCTCAAATCTGTGGATGGAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-678, gnl|bosTau2|chr16 (40592388-40593066)
               

               
               1-678, gnl|Hg17|chr1 (12459701-12460670)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-678, gnl|bosTau2|chr16 (40592388-40593066)
               

               
               1-678, gnl|Hg17|chr1 (12459701-12460670)

	1-678, gnl\|bosTau2\|chr16 (40592388-40593066)
	1-678, gnl\|Hg17\|chr1 (12459701-12460670)