Ss1.1-Ova1-OVRM10187F04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTGACAGGAGGCCGGGAAGGTGAAGTCAGAATTGGAGTCAACGCAATCAGCAGCCAAC CTCAACGTGAGATAGGACAGAGGAGAACTCAAATTCTTTTCGTCTTTTTGACTCTAGCCG CGTCCATGATGCCTACCCTGTGAAGTTCTCTCACCATCCAAAAACGCGATGTCCCTGCTC TTCTCTCGATGTAACTCCATCGTCACAGTCAAGAAGGATAAGAGACACATGGCTGAAGTG AACGCTTCCCCGCTCAAGCACTTTGTCACTGCCAAGAAGAAGATCAATGGCATTTTTGAG CAGCTGGGGGCCTACATCCAGGAGAGCGCCACCTTCCTCGAAGACACCTATAGGAATGAG GAGCTGGATCCTGTGACGACAGAAGAGCAAGTTCTGGACGTCAAAGGTTACCTGTCCAAA GTGAGGGGCATCAGCGAGGTGCTCGCCCGGCGGCACATGAAAGTGGCTTTTTTTGGCCGG ACGAGCAACGGGAAGAGCACCGTGATCAATGCCATGCTCTGGGACAAAGTGCTGCCCTCT GGGATCGGCCACACCACCAACTGCTTCCTGCGGGTGGAGGGCACAGACGGCCACGAGGCC TTCCTCCTCACGGAGGGCTCAGAGGAGAAGAGGAGCGTCAAGGTGAGGGCACTGCCCTGG GGACCCCCAGCCCGCCTTCCAGCCCTGGGCTCAGACCAACCTAGCGTGTCCACGGCGACA GAACAGGGGGCCCCTCTAAGGAGAGGTCGTGCCCTGCGGGGTGTTGGGGGAAGCCGTGTC CTAGCCTGGCTGTTTGCTGGAGCGCCCCGAGTTGGGGTTCACGGTCCTTGCGAATTGCTA GGCCGGCCATCTGACGCTTCTCTTTGCCGCAAAGAACGCATGTGCCTTTGTTCTTTGGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTGACAGGAGGCCGGGAAGGTGAAGTCAGAATTGGAGTCAACGCAATCAGCAGCCAAC CTCAACGTGAGATAGGACAGAGGAGAACTCAAATTCTTTTCGTCTTTTTGACTCTAGCCG CGTCCATGATGCCTACCCTGTGAAGTTCTCTCACCATCCAAAAACGCGATGTCCCTGCTC TTCTCTCGATGTAACTCCATCGTCACAGTCAAGAAGGATAAGAGACACATGGCTGAAGTG AACGCTTCCCCGCTCAAGCACTTTGTCACTGCCAAGAAGAAGATCAATGGCATTTTTGAG CAGCTGGGGGCCTACATCCAGGAGAGCGCCACCTTCCTCGAAGACACCTATAGGAATGAG GAGCTGGATCCTGTGACGACAGAAGAGCAAGTTCTGGACGTCAAAGGTTACCTGTCCAAA GTGAGGGGCATCAGCGAGGTGCTCGCCCGGCGGCACATGAAAGTGGCTTTTTTTGGCCGG ACGAGCAACGGGAAGAGCACCGTGATCAATGCCATGCTCTGGGACAAAGTGCTGCCCTCT GGGATCGGCCACACCACCAACTGCTTCCTGCGGGTGGAGGGCACAGACGGCCACGAGGCC TTCCTCCTCACGGAGGGCTCAGAGGAGAAGAGGAGCGTCAAGGTGAGGGCACTGCCCTGG GGACCCCCAGCCCGCCTTCCAGCCCTGGGCTCAGACCAACCTAGCGTGTCCACGGCGACA GAACAGGGGGCCCCTCTAAGGAGAGGTCGTGCCCTGCGGGGTGTTGGGGGAAGCCGTGTC CTAGCCTGGCTGTTTGCTGGAGCGCCCCGAGTTGGGGTTCACGGTCCTTGCGAATTGCTA GGCCGGCCATCTGACGCTTCTCTTTGCCGCAAAGAACGCATGTGCCTTTGTTCTTTGGGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 25-136, - strand, RNAz p=0.631165 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 25-136, - strand, RNAz p=0.631165 |
| Aligned organism(s): 51 entry(ies) | More info |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
| 25-164, gnl|bosTau2|chr16 (21350946-21350809) | |
| 25-164, gnl|canFam2|chr2 (87190098-87189871) | |
| 25-164, gnl|dasNov1|scaffold_149192 (3685-3461) | |
| 25-164, gnl|echTel1|scaffold_295150 (43329-43120) | |
| 25-164, gnl|hg17|chr1 (11976269-11976499) | |
| 25-164, gnl|Hg17|chr1 (11976290-11976437) | |
| 25-164, gnl|mm7|chr4 (146893062-146892838) | |
| 25-164, gnl|Mm7|chr4 (146893038-146892897) | |
| 25-164, gnl|monDom2|scaffold_175 (97569-97314) | |
| 25-164, gnl|oryCun1|scaffold_195503 (12416-12213) | |
| 25-164, gnl|panTro1|chr1 (12182096-12182326) | |
| 25-164, gnl|rheMac2|chr1 (15093870-15094099) | |
| 25-164, gnl|rn3|chr5 (164990973-164990750) | |
| 165-343, gnl|bosTau2|chr16 (21346041-21345863) | |
| 165-343, gnl|canFam2|chr2 (87185657-87185507) | |
| 165-343, gnl|danRer3|chr14 (44600076-44599927) | |
| 165-343, gnl|dasNov1|scaffold_110985 (790-939) | |
| 165-343, gnl|echTel1|scaffold_278604 (3294-3444) | |
| 165-343, gnl|fr1|chrUn (302142936-302143081) | |
| 165-343, gnl|galGal2|chr21 (5244294-5244144) | |
| 165-343, gnl|hg17|chr1 (11983478-11983628) | |
| 165-343, gnl|Hg17|chr1 (11983488-11983666) | |
| 165-343, gnl|loxAfr1|scaffold_16044 (70697-70547) | |
| 165-343, gnl|mm7|chr4 (146888196-146888046) | |
| 165-343, gnl|Mm7|chr4 (146888184-146888006) | |
| 165-343, gnl|monDom2|scaffold_175 (92953-92803) | |
| 165-343, gnl|oryCun1|scaffold_75000 (426-576) | |
| 165-343, gnl|panTro1|chr1 (12189300-12189450) | |
| 165-343, gnl|rheMac2|chr1 (15064817-15064667) | |
| 165-343, gnl|rn3|chr5 (164986389-164986239) | |
| 165-343, gnl|tetNig1|chrUn_random (103076603-103076757) | |
| 165-343, gnl|xenTro1|scaffold_348 (819411-819261) | |
| 479-644, gnl|bosTau2|chr1 (57310446-57310611) | |
| 479-644, gnl|canFam2|chr34 (15798115-15798313) | |
| 479-644, gnl|danRer3|chr14 (44593777-44593598) | |
| 479-644, gnl|dasNov1|scaffold_44499 (39624-39429) | |
| 479-644, gnl|echTel1|scaffold_285949 (57840-57643) | |
| 479-644, gnl|fr1|chrUn (100445672-100445859) | |
| 479-644, gnl|galGal2|chr9 (16925300-16925498) | |
| 479-644, gnl|hg17|chr3 (180559310-180559504) | |
| 479-644, gnl|Hg17|chr3 (180559329-180559494) | |
| 479-644, gnl|loxAfr1|scaffold_12642 (54946-54748) | |
| 479-644, gnl|mm7|chr3 (32347017-32347211) | |
| 479-644, gnl|Mm7|chr3 (32347036-32347201) | |
| 479-644, gnl|monDom2|scaffold_28 (28093151-28092958) | |
| 479-644, gnl|oryCun1|scaffold_206527 (34106-34300) | |
| 479-644, gnl|panTro1|chr2 (184314517-184314711) | |
| 479-644, gnl|rheMac2|chr2 (107445566-107445372) | |
| 479-644, gnl|rn3|chr2 (118690657-118690851) | |
| 479-644, gnl|tetNig1|chr1 (11949363-11949165) | |
| 479-644, gnl|xenTro1|scaffold_594 (472010-472217) |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 25-164, gnl|bosTau2|chr16 (21350946-21350809) | |
| 25-164, gnl|canFam2|chr2 (87190098-87189871) | |
| 25-164, gnl|dasNov1|scaffold_149192 (3685-3461) | |
| 25-164, gnl|echTel1|scaffold_295150 (43329-43120) | |
| 25-164, gnl|hg17|chr1 (11976269-11976499) | |
| 25-164, gnl|Hg17|chr1 (11976290-11976437) | |
| 25-164, gnl|mm7|chr4 (146893062-146892838) | |
| 25-164, gnl|Mm7|chr4 (146893038-146892897) | |
| 25-164, gnl|monDom2|scaffold_175 (97569-97314) | |
| 25-164, gnl|oryCun1|scaffold_195503 (12416-12213) | |
| 25-164, gnl|panTro1|chr1 (12182096-12182326) | |
| 25-164, gnl|rheMac2|chr1 (15093870-15094099) | |
| 25-164, gnl|rn3|chr5 (164990973-164990750) | |
| 165-343, gnl|bosTau2|chr16 (21346041-21345863) | |
| 165-343, gnl|canFam2|chr2 (87185657-87185507) | |
| 165-343, gnl|danRer3|chr14 (44600076-44599927) | |
| 165-343, gnl|dasNov1|scaffold_110985 (790-939) | |
| 165-343, gnl|echTel1|scaffold_278604 (3294-3444) | |
| 165-343, gnl|fr1|chrUn (302142936-302143081) | |
| 165-343, gnl|galGal2|chr21 (5244294-5244144) | |
| 165-343, gnl|hg17|chr1 (11983478-11983628) | |
| 165-343, gnl|Hg17|chr1 (11983488-11983666) | |
| 165-343, gnl|loxAfr1|scaffold_16044 (70697-70547) | |
| 165-343, gnl|mm7|chr4 (146888196-146888046) | |
| 165-343, gnl|Mm7|chr4 (146888184-146888006) | |
| 165-343, gnl|monDom2|scaffold_175 (92953-92803) | |
| 165-343, gnl|oryCun1|scaffold_75000 (426-576) | |
| 165-343, gnl|panTro1|chr1 (12189300-12189450) | |
| 165-343, gnl|rheMac2|chr1 (15064817-15064667) | |
| 165-343, gnl|rn3|chr5 (164986389-164986239) | |
| 165-343, gnl|tetNig1|chrUn_random (103076603-103076757) | |
| 165-343, gnl|xenTro1|scaffold_348 (819411-819261) | |
| 479-644, gnl|bosTau2|chr1 (57310446-57310611) | |
| 479-644, gnl|canFam2|chr34 (15798115-15798313) | |
| 479-644, gnl|danRer3|chr14 (44593777-44593598) | |
| 479-644, gnl|dasNov1|scaffold_44499 (39624-39429) | |
| 479-644, gnl|echTel1|scaffold_285949 (57840-57643) | |
| 479-644, gnl|fr1|chrUn (100445672-100445859) | |
| 479-644, gnl|galGal2|chr9 (16925300-16925498) | |
| 479-644, gnl|hg17|chr3 (180559310-180559504) | |
| 479-644, gnl|Hg17|chr3 (180559329-180559494) | |
| 479-644, gnl|loxAfr1|scaffold_12642 (54946-54748) | |
| 479-644, gnl|mm7|chr3 (32347017-32347211) | |
| 479-644, gnl|Mm7|chr3 (32347036-32347201) | |
| 479-644, gnl|monDom2|scaffold_28 (28093151-28092958) | |
| 479-644, gnl|oryCun1|scaffold_206527 (34106-34300) | |
| 479-644, gnl|panTro1|chr2 (184314517-184314711) | |
| 479-644, gnl|rheMac2|chr2 (107445566-107445372) | |
| 479-644, gnl|rn3|chr2 (118690657-118690851) | |
| 479-644, gnl|tetNig1|chr1 (11949363-11949165) | |
| 479-644, gnl|xenTro1|scaffold_594 (472010-472217) |