Non-Coding RNA Search

Ss1.1-Ova1-OVRM10196F05.5

Sequence:


               
               ATTGTTAGCCGGAGCCGGGGCGGTTCTGGGCGGCTGCTGCCTGGGGCGCCGGAGTTGCGG
GAGCCGCCCGCCCTCCGCCGCCTGCCGGCCGACCTGCCCACCCACCATCCCTCCCAGCCC
TGCTACCCTGGGAACTCCCTGACCGTCGCTGCGGCCACGGGACTCTCCCCCTCCTCCCTC
CTTCCCACCCGGGCTAGGGCGGCGGCGGCGGCGGCGGCGGCAGCGGGGGCGGCAGAGACC
ATCACGGGAGGCGGCGGCTGCAGCGGGGCCGAATCCTAATGCACCTGGCTAACTGGTGGT
GAGCAGGGGCTTTGGGGCCAACGTGGTGGGCTCCCCAAAGAAACCCCTTTGAAACCAATG
GATGCATTCACGGGCTCGGGTCTCAAGAGGAAGTTTGATGATGTGGATGTGGGCTCATCA
GTTTCCAACTCAGACGATGAGATCTCCAGCAGTGACAGTGCTGACAGCTGCGACAGCCTC
AATCCTCCTACAACTGCCAGCTTCACACCCACATCCATCCTGAAGCGGCAGAAGCAGCTG
CGGAGGAAGAATGTGCGTTTTGACCAGGTGACCGTGTACTACTTCGCCCGGCGCCAGGGT
TTCACCAGTGTGCCCAGCCAGGGCGGCAGCTCCCTGGGCATGGCGCAGCGCCATAACTCT
GTACGCAGCTACACGCTCTGTGAGTTTGCTCAAGAGCAGGAGGTGAACCATCGGGAGATT
CTTCGTGAACACCTGAAGGAGGAGAAACTCCACGCCAAGAAGATGAAGCTGACCAAGAAC
GGGACGGTGGAGTCGGTGGAGGCTGACGGCCTGACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGTTAGCCGGAGCCGGGGCGGTTCTGGGCGGCTGCTGCCTGGGGCGCCGGAGTTGCGG
GAGCCGCCCGCCCTCCGCCGCCTGCCGGCCGACCTGCCCACCCACCATCCCTCCCAGCCC
TGCTACCCTGGGAACTCCCTGACCGTCGCTGCGGCCACGGGACTCTCCCCCTCCTCCCTC
CTTCCCACCCGGGCTAGGGCGGCGGCGGCGGCGGCGGCGGCAGCGGGGGCGGCAGAGACC
ATCACGGGAGGCGGCGGCTGCAGCGGGGCCGAATCCTAATGCACCTGGCTAACTGGTGGT
GAGCAGGGGCTTTGGGGCCAACGTGGTGGGCTCCCCAAAGAAACCCCTTTGAAACCAATG
GATGCATTCACGGGCTCGGGTCTCAAGAGGAAGTTTGATGATGTGGATGTGGGCTCATCA
GTTTCCAACTCAGACGATGAGATCTCCAGCAGTGACAGTGCTGACAGCTGCGACAGCCTC
AATCCTCCTACAACTGCCAGCTTCACACCCACATCCATCCTGAAGCGGCAGAAGCAGCTG
CGGAGGAAGAATGTGCGTTTTGACCAGGTGACCGTGTACTACTTCGCCCGGCGCCAGGGT
TTCACCAGTGTGCCCAGCCAGGGCGGCAGCTCCCTGGGCATGGCGCAGCGCCATAACTCT
GTACGCAGCTACACGCTCTGTGAGTTTGCTCAAGAGCAGGAGGTGAACCATCGGGAGATT
CTTCGTGAACACCTGAAGGAGGAGAAACTCCACGCCAAGAAGATGAAGCTGACCAAGAAC
GGGACGGTGGAGTCGGTGGAGGCTGACGGCCTGACC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61875588|ref|XP_603630.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61875588|ref|XP_603630.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-218, gnl|bosTau2|chr5 (18804419-18804202)
               

               
               1-218, gnl|Hg17|chr12 (49763646-49763427)
               

               
               1-218, gnl|Mm7|chr15 (100480506-100480316)
               


               
               494-771, gnl|bosTau2|chr22 (9890914-9890637)
               

               
               494-771, gnl|Hg17|chr3 (39161766-39161489)
               

               
               494-771, gnl|Mm7|chr9 (119670322-119670046)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-218, gnl|bosTau2|chr5 (18804419-18804202)
               

               
               1-218, gnl|Hg17|chr12 (49763646-49763427)
               

               
               1-218, gnl|Mm7|chr15 (100480506-100480316)
               


               
               494-771, gnl|bosTau2|chr22 (9890914-9890637)
               

               
               494-771, gnl|Hg17|chr3 (39161766-39161489)
               

               
               494-771, gnl|Mm7|chr9 (119670322-119670046)

	1-218, gnl\|bosTau2\|chr5 (18804419-18804202)
	1-218, gnl\|Hg17\|chr12 (49763646-49763427)
	1-218, gnl\|Mm7\|chr15 (100480506-100480316)

	494-771, gnl\|bosTau2\|chr22 (9890914-9890637)
	494-771, gnl\|Hg17\|chr3 (39161766-39161489)
	494-771, gnl\|Mm7\|chr9 (119670322-119670046)