Ss1.1-Ova1-OVRM10197H12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGTTTTAAGACCCTGCCCTGCCTAAGAGGCTCCACAGCTGTGCCGCTGGACAGTTTCC TTCCCAGTGGTTTGAGGAGAACATCATAGACATCTGCCTGGAACTGCTAGCCAAGAGCCT GAACTTCCAGATCGACCCAGCCACAGACTGTGCCCTGCGGGGCAGCCCAGTCTACATCAG CAGGGTCGTGTGCGCCATGATAAACAGCAACGATGACAACGGAGTGCTCAATGGAAACTG GAGCGAGAATTACTTAGACGGCATCAACCCCGCAGAGTGGACGGGCAGCGTGGCCATCCT GAAGCAGTGGCACGCCACGGGCTGCCAGCCCGTGCGCTACGGGCAGTGCTGGGTCTTTGC TGCTGTCATGTGCACAGTGATGAGGTGCCTGGGGATCCCCACCCGCGTGATCACCAACTT TGATTCTGGCCACGACACAGACGGAAACCTGATCATAGATGAGTATTATGACAACACAGG CAGGATTTTGGAGAATAAGAAGAAAGACACTGTCTGGAATTTCCACGTCTGGAACGAGTG CTGGATGGCCCGCAGAGACCTTCCCGAAGGATACGGAGGCTGGCAGGTGCTGGATGCCAC GCCTCAGGAGACGAGCAACGGTCTCTACTGCTGCGGCCCTGCCTCCGTCAGAGCCATCAA GGAGGGTGAGGTGGATCTGAACTATGACACCGCCTTCGCCTTTTCCATGGTGAATGCTGA CTGCATGTCCTGGCTGGTCTTCAGAGGGAAGGAGCAGAAACTTCACCAGGACACCAGTTC TGTTGGCAATTTTATCAGCACGAAGGGCATCCAGAGCAATGAGCGGGATGACATTACGGA GAACTACAAGTACGGAGAAGGTTCCCCCCAGGAGAGGCAGGTATTCCTGAAGGCTCTTCA GAAGCTGAAAGCTGGAGGGTCCCAAGGCTCCCTCCGAGAGGACTTGCAACCTTCCGGGTC CCTGCCGCCGAGGGACAGTCCTCGGAGCCTGGCTACGCCTTCCCTTCGGCCCAGTGATGT TGTCCAAGTCTCCCTGAAATTCCAGCTGCTTGACCCACCGGATATGGGCCGGGACATAAG GTTTGTCCTGCTGGCGCTCAACATGTCGCTCCAGTTCAAGGACCTCAGAGTGAACCTGAG TGCCCAGTCCCTGCTGCATGATGGCAGCCCCCTGCCTCCATTCTGGCAGGACACAGCCTT CCTCACACTCGCTCCTGAAGAAGCGAAGACCCATTCCTGCAAAATCCCTTATTCTCAGTA CAGCCAGTACCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGTTTTAAGACCCTGCCCTGCCTAAGAGGCTCCACAGCTGTGCCGCTGGACAGTTTCC TTCCCAGTGGTTTGAGGAGAACATCATAGACATCTGCCTGGAACTGCTAGCCAAGAGCCT GAACTTCCAGATCGACCCAGCCACAGACTGTGCCCTGCGGGGCAGCCCAGTCTACATCAG CAGGGTCGTGTGCGCCATGATAAACAGCAACGATGACAACGGAGTGCTCAATGGAAACTG GAGCGAGAATTACTTAGACGGCATCAACCCCGCAGAGTGGACGGGCAGCGTGGCCATCCT GAAGCAGTGGCACGCCACGGGCTGCCAGCCCGTGCGCTACGGGCAGTGCTGGGTCTTTGC TGCTGTCATGTGCACAGTGATGAGGTGCCTGGGGATCCCCACCCGCGTGATCACCAACTT TGATTCTGGCCACGACACAGACGGAAACCTGATCATAGATGAGTATTATGACAACACAGG CAGGATTTTGGAGAATAAGAAGAAAGACACTGTCTGGAATTTCCACGTCTGGAACGAGTG CTGGATGGCCCGCAGAGACCTTCCCGAAGGATACGGAGGCTGGCAGGTGCTGGATGCCAC GCCTCAGGAGACGAGCAACGGTCTCTACTGCTGCGGCCCTGCCTCCGTCAGAGCCATCAA GGAGGGTGAGGTGGATCTGAACTATGACACCGCCTTCGCCTTTTCCATGGTGAATGCTGA CTGCATGTCCTGGCTGGTCTTCAGAGGGAAGGAGCAGAAACTTCACCAGGACACCAGTTC TGTTGGCAATTTTATCAGCACGAAGGGCATCCAGAGCAATGAGCGGGATGACATTACGGA GAACTACAAGTACGGAGAAGGTTCCCCCCAGGAGAGGCAGGTATTCCTGAAGGCTCTTCA GAAGCTGAAAGCTGGAGGGTCCCAAGGCTCCCTCCGAGAGGACTTGCAACCTTCCGGGTC CCTGCCGCCGAGGGACAGTCCTCGGAGCCTGGCTACGCCTTCCCTTCGGCCCAGTGATGT TGTCCAAGTCTCCCTGAAATTCCAGCTGCTTGACCCACCGGATATGGGCCGGGACATAAG GTTTGTCCTGCTGGCGCTCAACATGTCGCTCCAGTTCAAGGACCTCAGAGTGAACCTGAG TGCCCAGTCCCTGCTGCATGATGGCAGCCCCCTGCCTCCATTCTGGCAGGACACAGCCTT CCTCACACTCGCTCCTGAAGAAGCGAAGACCCATTCCTGCAAAATCCCTTATTCTCAGTA CAGCCAGTACCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 973-1223, - strand, RNAz p=0.790567 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 973-1223, - strand, RNAz p=0.790567 |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 199-377, gnl|bosTau2|chr21 (35651063-35651241) | |
| 199-377, gnl|canFam2|chr30 (13106635-13106809) | |
| 199-377, gnl|danRer3|chr18 (20306308-20306150) | |
| 199-377, gnl|dasNov1|scaffold_66729 (3325-3144) | |
| 199-377, gnl|echTel1|scaffold_315706 (14696-14509) | |
| 199-377, gnl|fr1|chrUn (50170694-50170520) | |
| 199-377, gnl|galGal2|chr20 (6394959-6394802) | |
| 199-377, gnl|hg17|chr15 (41332228-41332402) | |
| 199-377, gnl|Hg17|chr15 (41332427-41332249) | |
| 199-377, gnl|loxAfr1|scaffold_43016 (8123-7937) | |
| 199-377, gnl|mm7|chr2 (120811560-120811734) | |
| 199-377, gnl|Mm7|chr2 (120811759-120811581) | |
| 199-377, gnl|monDom2|scaffold_53 (10927440-10927260) | |
| 199-377, gnl|oryCun1|scaffold_199155 (66342-66185) | |
| 199-377, gnl|panTro1|chr16 (41321799-41321973) | |
| 199-377, gnl|rheMac2|chr7 (21694517-21694691) | |
| 199-377, gnl|rn3|chr3 (107752272-107752446) | |
| 199-377, gnl|tetNig1|chr11 (11009553-11009725) | |
| 199-377, gnl|xenTro1|scaffold_316 (462358-462201) | |
| 203-375, gnl|bosTau2|chr13 (48585932-48586104) | |
| 203-375, gnl|Hg17|chr20 (36208707-36208535) | |
| 203-375, gnl|Mm7|chr2 (157872395-157872223) | |
| 513-622, gnl|bosTau2|chr21 (37379421-37379312) | |
| 513-622, gnl|canFam2|chr30 (13096764-13096882) | |
| 513-622, gnl|danRer3|chr18 (20308759-20308641) | |
| 513-622, gnl|dasNov1|scaffold_73123 (2387-2505) | |
| 513-622, gnl|echTel1|scaffold_166831 (8087-8206) | |
| 513-622, gnl|fr1|chrUn (50171076-50170958) | |
| 513-622, gnl|galGal2|chr20 (6397085-6396967) | |
| 513-622, gnl|hg17|chr15 (41318642-41318760) | |
| 513-622, gnl|Hg17|chr15 (41318758-41318651) | |
| 513-622, gnl|loxAfr1|scaffold_80299 (6422-6281) | |
| 513-622, gnl|mm7|chr2 (120793578-120793694) | |
| 513-622, gnl|Mm7|chr2 (120793694-120793586) | |
| 513-622, gnl|monDom2|scaffold_53 (11030093-11029975) | |
| 513-622, gnl|oryCun1|scaffold_214600 (48854-48970) | |
| 513-622, gnl|panTro1|chr16 (41308103-41308221) | |
| 513-622, gnl|rheMac2|chr7 (21680561-21680679) | |
| 513-622, gnl|rn3|chr3 (107736703-107736820) | |
| 513-622, gnl|tetNig1|chr11 (11009086-11009209) | |
| 513-622, gnl|xenTro1|scaffold_316 (484018-483901) | |
| 859-1223, gnl|bosTau2|chr21 (37377506-37377145) | |
| 859-1223, gnl|Hg17|chr15 (41315329-41314959) | |
| 859-1223, gnl|Mm7|chr2 (120790044-120789677) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 199-377, gnl|bosTau2|chr21 (35651063-35651241) | |
| 199-377, gnl|canFam2|chr30 (13106635-13106809) | |
| 199-377, gnl|danRer3|chr18 (20306308-20306150) | |
| 199-377, gnl|dasNov1|scaffold_66729 (3325-3144) | |
| 199-377, gnl|echTel1|scaffold_315706 (14696-14509) | |
| 199-377, gnl|fr1|chrUn (50170694-50170520) | |
| 199-377, gnl|galGal2|chr20 (6394959-6394802) | |
| 199-377, gnl|hg17|chr15 (41332228-41332402) | |
| 199-377, gnl|Hg17|chr15 (41332427-41332249) | |
| 199-377, gnl|loxAfr1|scaffold_43016 (8123-7937) | |
| 199-377, gnl|mm7|chr2 (120811560-120811734) | |
| 199-377, gnl|Mm7|chr2 (120811759-120811581) | |
| 199-377, gnl|monDom2|scaffold_53 (10927440-10927260) | |
| 199-377, gnl|oryCun1|scaffold_199155 (66342-66185) | |
| 199-377, gnl|panTro1|chr16 (41321799-41321973) | |
| 199-377, gnl|rheMac2|chr7 (21694517-21694691) | |
| 199-377, gnl|rn3|chr3 (107752272-107752446) | |
| 199-377, gnl|tetNig1|chr11 (11009553-11009725) | |
| 199-377, gnl|xenTro1|scaffold_316 (462358-462201) | |
| 203-375, gnl|bosTau2|chr13 (48585932-48586104) | |
| 203-375, gnl|Hg17|chr20 (36208707-36208535) | |
| 203-375, gnl|Mm7|chr2 (157872395-157872223) | |
| 513-622, gnl|bosTau2|chr21 (37379421-37379312) | |
| 513-622, gnl|canFam2|chr30 (13096764-13096882) | |
| 513-622, gnl|danRer3|chr18 (20308759-20308641) | |
| 513-622, gnl|dasNov1|scaffold_73123 (2387-2505) | |
| 513-622, gnl|echTel1|scaffold_166831 (8087-8206) | |
| 513-622, gnl|fr1|chrUn (50171076-50170958) | |
| 513-622, gnl|galGal2|chr20 (6397085-6396967) | |
| 513-622, gnl|hg17|chr15 (41318642-41318760) | |
| 513-622, gnl|Hg17|chr15 (41318758-41318651) | |
| 513-622, gnl|loxAfr1|scaffold_80299 (6422-6281) | |
| 513-622, gnl|mm7|chr2 (120793578-120793694) | |
| 513-622, gnl|Mm7|chr2 (120793694-120793586) | |
| 513-622, gnl|monDom2|scaffold_53 (11030093-11029975) | |
| 513-622, gnl|oryCun1|scaffold_214600 (48854-48970) | |
| 513-622, gnl|panTro1|chr16 (41308103-41308221) | |
| 513-622, gnl|rheMac2|chr7 (21680561-21680679) | |
| 513-622, gnl|rn3|chr3 (107736703-107736820) | |
| 513-622, gnl|tetNig1|chr11 (11009086-11009209) | |
| 513-622, gnl|xenTro1|scaffold_316 (484018-483901) | |
| 859-1223, gnl|bosTau2|chr21 (37377506-37377145) | |
| 859-1223, gnl|Hg17|chr15 (41315329-41314959) | |
| 859-1223, gnl|Mm7|chr2 (120790044-120789677) |