Ss1.1-Ova1-OVRM10204D12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAACAGCCTGAGACACCCGATGATATCATTCCTCAAAAGAAACCTGCTCGGTACAGAAGG GCCATAAGTTATGACAGTAAAGAATACTACATGCGACTAGCCTCCGGCAACCCAGCCATT GTCCAAGATGCCATTGTAGAGAGTTCCGAAGGTGAAGCTACCCAGCAAGAACCAGAGCAT GGCGAAGATACGATTGCCAAAGTCAAAGGACTGGTGAAGCCGCCTCTCAAACGGTCTCGC TCTGCGCCTGACGGGGGCGACGAGGAGACGCAGGAGCAGCTCCAGGACCAGGTGGCCGAG GGCAGCTCCATGGAGGAGGAGGAGAAGACGGACAACGCCACGCTGCTGCGCCTGCTCGAG GACGGCGAGAAGATCCAACACATGTACCGCTGTGCTCGAGTCCAGGGCCTGGATACCAGT GAGGGGCTGCTTCTGTTTGGTAAAGAGCATTTTTATGTGATCGATGGATTTACAATGACA GCAACCAGGGAAATAAGAGATATTGAAACCTTACCTCCAAATATGCATGAGCCGATCATC CCCAGAGGAGCCAGGCAGGGCCCCAGTCAGCTCAAGAGAACGTGCAGCATTTTTGCATAT GAAGACATCAAAGAAGTTCATAAGCGGCGTTATCTGCTGCAGCCCATTGCTGTGGAAGTC TTCTCTGGAGATGGACGGAATTACCTCCTTGCATTTCAGAAAGGAATTAGAAACAAAGTC TATCAAAGGTTTTTGGCTGTAGTGCCATCTCTAACTGACAGTTCAGAGTCTGTATCTGGG CAACGACCAAACACAAGCGTGGAGCAGGGATCTGGATTGCTTAGCACTCTGGTTGGAGAG AAATCTGTGACTCAGAGATGGGAGAGAGGCGAAATCAGCAACTTTCAGTATTTGATGCAC TTGAACACTTTGGCCGGCAGATCCTATAATGATCTCATGCAGTACCCTGTCTTCCCCTGG ATCCTTGCAGATTATGACTCAGAGGAGGTAGATCTTACTAATCCCAAGACATTTAGAAAC CTGGCAAAGCCAATGGGCGCACAGACAGATGAACGACTCGCTCAGTATAAGAAGCGATAT AAAGACTGGGAAGATCCTAATGGAGAAACTCCAGCCTACCACTACGGGACCCACTATTCG TCTGCCATGATTGTGGCTTCGTACCTGGTACGGATGGAGCCCTTCACACAGATATTCCTC AGGCTCCAGGGAGGCCACTTTGACCTGGCTGACCGGATGTTTCACAGTGTCCGCGAGGCC TGGTACTCAGCATCCAAGCACAACATGGCAGACGTGAAGGAACTGATCCCAGAATTTTTT TACTTACCAGAATTCCTGTTCAATTCCAACAACTTTGATCTAGGCTGTAAACAGAATGGC ACCAAGCTTGGAGATGTCATCCTTCCACCCTGGGCAAAAGGGGACCCACGAGAGTTCATC CGAGTGCACCGAGAGGCTTTGGAATGTGATTATGTGAGTGCCCATCTGCATGAGTGGATT GACCTCATCTTCGGCTATAAGCAGCAAGGCCCCGCTGCCGTGGAAGCTGTCAACGTCTTC CACCATCTTTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAACAGCCTGAGACACCCGATGATATCATTCCTCAAAAGAAACCTGCTCGGTACAGAAGG GCCATAAGTTATGACAGTAAAGAATACTACATGCGACTAGCCTCCGGCAACCCAGCCATT GTCCAAGATGCCATTGTAGAGAGTTCCGAAGGTGAAGCTACCCAGCAAGAACCAGAGCAT GGCGAAGATACGATTGCCAAAGTCAAAGGACTGGTGAAGCCGCCTCTCAAACGGTCTCGC TCTGCGCCTGACGGGGGCGACGAGGAGACGCAGGAGCAGCTCCAGGACCAGGTGGCCGAG GGCAGCTCCATGGAGGAGGAGGAGAAGACGGACAACGCCACGCTGCTGCGCCTGCTCGAG GACGGCGAGAAGATCCAACACATGTACCGCTGTGCTCGAGTCCAGGGCCTGGATACCAGT GAGGGGCTGCTTCTGTTTGGTAAAGAGCATTTTTATGTGATCGATGGATTTACAATGACA GCAACCAGGGAAATAAGAGATATTGAAACCTTACCTCCAAATATGCATGAGCCGATCATC CCCAGAGGAGCCAGGCAGGGCCCCAGTCAGCTCAAGAGAACGTGCAGCATTTTTGCATAT GAAGACATCAAAGAAGTTCATAAGCGGCGTTATCTGCTGCAGCCCATTGCTGTGGAAGTC TTCTCTGGAGATGGACGGAATTACCTCCTTGCATTTCAGAAAGGAATTAGAAACAAAGTC TATCAAAGGTTTTTGGCTGTAGTGCCATCTCTAACTGACAGTTCAGAGTCTGTATCTGGG CAACGACCAAACACAAGCGTGGAGCAGGGATCTGGATTGCTTAGCACTCTGGTTGGAGAG AAATCTGTGACTCAGAGATGGGAGAGAGGCGAAATCAGCAACTTTCAGTATTTGATGCAC TTGAACACTTTGGCCGGCAGATCCTATAATGATCTCATGCAGTACCCTGTCTTCCCCTGG ATCCTTGCAGATTATGACTCAGAGGAGGTAGATCTTACTAATCCCAAGACATTTAGAAAC CTGGCAAAGCCAATGGGCGCACAGACAGATGAACGACTCGCTCAGTATAAGAAGCGATAT AAAGACTGGGAAGATCCTAATGGAGAAACTCCAGCCTACCACTACGGGACCCACTATTCG TCTGCCATGATTGTGGCTTCGTACCTGGTACGGATGGAGCCCTTCACACAGATATTCCTC AGGCTCCAGGGAGGCCACTTTGACCTGGCTGACCGGATGTTTCACAGTGTCCGCGAGGCC TGGTACTCAGCATCCAAGCACAACATGGCAGACGTGAAGGAACTGATCCCAGAATTTTTT TACTTACCAGAATTCCTGTTCAATTCCAACAACTTTGATCTAGGCTGTAAACAGAATGGC ACCAAGCTTGGAGATGTCATCCTTCCACCCTGGGCAAAAGGGGACCCACGAGAGTTCATC CGAGTGCACCGAGAGGCTTTGGAATGTGATTATGTGAGTGCCCATCTGCATGAGTGGATT GACCTCATCTTCGGCTATAAGCAGCAAGGCCCCGCTGCCGTGGAAGCTGTCAACGTCTTC CACCATCTTTTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 522-642, - strand, RNAz p=0.789848 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 522-642, - strand, RNAz p=0.789848 |
| Aligned organism(s): 95 entry(ies) | More info |
| Aligned organism(s): 95 entry(ies) | Help | Less info |
| 33-209, gnl|bosTau2|chr6 (57942472-57942648) | |
| 33-209, gnl|canFam2|chr32 (11445125-11445262) | |
| 33-209, gnl|danRer3|chr5 (35451659-35451522) | |
| 33-209, gnl|dasNov1|scaffold_274211 (141-4) | |
| 33-209, gnl|echTel1|scaffold_283366 (34436-34299) | |
| 33-209, gnl|fr1|chrUn (245443337-245443200) | |
| 33-209, gnl|galGal2|chr4 (47542757-47542620) | |
| 33-209, gnl|hg17|chr4 (86002757-86002894) | |
| 33-209, gnl|Hg17|chr4 (86002933-86002757) | |
| 33-209, gnl|loxAfr1|scaffold_1559 (7996-7859) | |
| 33-209, gnl|mm7|chr5 (101064200-101064337) | |
| 33-209, gnl|Mm7|chr5 (101064376-101064200) | |
| 33-209, gnl|monDom2|scaffold_37 (18743657-18743794) | |
| 33-209, gnl|oryCun1|scaffold_211496 (167983-168120) | |
| 33-209, gnl|panTro1|chr3 (47677393-47677256) | |
| 33-209, gnl|rheMac2|chr5 (44798648-44798511) | |
| 33-209, gnl|rn3|chr14 (9024774-9024637) | |
| 33-209, gnl|tetNig1|chr12 (3556143-3556280) | |
| 33-209, gnl|xenTro1|scaffold_304 (798436-798573) | |
| 371-521, gnl|bosTau2|chr6 (57948470-57948620) | |
| 371-521, gnl|canFam2|chr32 (11440078-11440278) | |
| 371-521, gnl|danRer3|chr5 (35455164-35454973) | |
| 371-521, gnl|dasNov1|scaffold_56293 (11593-11387) | |
| 371-521, gnl|echTel1|scaffold_283366 (40578-40387) | |
| 371-521, gnl|fr1|chrUn (245444067-245443886) | |
| 371-521, gnl|galGal2|chr4 (47544385-47544205) | |
| 371-521, gnl|hg17|chr4 (85996749-85996951) | |
| 371-521, gnl|Hg17|chr4 (85996904-85996754) | |
| 371-521, gnl|mm7|chr5 (101058316-101058503) | |
| 371-521, gnl|Mm7|chr5 (101058471-101058321) | |
| 371-521, gnl|monDom2|scaffold_37 (18733811-18733986) | |
| 371-521, gnl|oryCun1|scaffold_208217 (4014-4216) | |
| 371-521, gnl|panTro1|chr3 (47683416-47683211) | |
| 371-521, gnl|rheMac2|chr5 (44804654-44804452) | |
| 371-521, gnl|rn3|chr14 (9030571-9030371) | |
| 371-521, gnl|tetNig1|chr12 (3555372-3555533) | |
| 371-521, gnl|xenTro1|scaffold_304 (794795-794990) | |
| 522-642, gnl|bosTau2|chr6 (57950361-57950483) | |
| 522-642, gnl|canFam2|chr32 (11438838-11438998) | |
| 522-642, gnl|danRer3|chr5 (35455778-35455627) | |
| 522-642, gnl|echTel1|scaffold_283366 (42032-41872) | |
| 522-642, gnl|fr1|chrUn (245444488-245444353) | |
| 522-642, gnl|galGal2|chr4 (47544787-47544627) | |
| 522-642, gnl|hg17|chr4 (85995207-85995367) | |
| 522-642, gnl|Hg17|chr4 (85995348-85995228) | |
| 522-642, gnl|loxAfr1|scaffold_1559 (15724-15570) | |
| 522-642, gnl|mm7|chr5 (101056372-101056533) | |
| 522-642, gnl|Mm7|chr5 (101056513-101056393) | |
| 522-642, gnl|monDom2|scaffold_37 (18728132-18728295) | |
| 522-642, gnl|panTro1|chr3 (47684954-47684794) | |
| 522-642, gnl|rheMac2|chr5 (44805922-44805762) | |
| 522-642, gnl|rn3|chr14 (9032815-9032668) | |
| 522-642, gnl|tetNig1|chr12 (3554881-3555016) | |
| 522-642, gnl|xenTro1|scaffold_304 (794175-794322) | |
| 983-1103, gnl|bosTau2|chr6 (57960860-57960980) | |
| 983-1103, gnl|canFam2|chr32 (11430703-11430865) | |
| 983-1103, gnl|danRer3|chr5 (35460049-35459898) | |
| 983-1103, gnl|dasNov1|scaffold_110073 (3238-3398) | |
| 983-1103, gnl|echTel1|scaffold_283366 (51778-51616) | |
| 983-1103, gnl|fr1|chrUn (245445637-245445489) | |
| 983-1103, gnl|galGal2|chr4 (47547248-47547088) | |
| 983-1103, gnl|hg17|chr4 (85983715-85983877) | |
| 983-1103, gnl|Hg17|chr4 (85983845-85983725) | |
| 983-1103, gnl|loxAfr1|scaffold_1559 (24396-24235) | |
| 983-1103, gnl|mm7|chr5 (101049713-101049875) | |
| 983-1103, gnl|Mm7|chr5 (101049843-101049723) | |
| 983-1103, gnl|monDom2|scaffold_37 (18716066-18716242) | |
| 983-1103, gnl|oryCun1|scaffold_127515 (7629-7467) | |
| 983-1103, gnl|panTro1|chr3 (47696450-47696288) | |
| 983-1103, gnl|rheMac2|chr5 (44817140-44816978) | |
| 983-1103, gnl|rn3|chr14 (9039567-9039405) | |
| 983-1103, gnl|tetNig1|chr12 (3553737-3553872) | |
| 983-1103, gnl|xenTro1|scaffold_304 (781321-781501) | |
| 1207-1382, gnl|bosTau2|chr6 (57964544-57964719) | |
| 1207-1382, gnl|Hg17|chr4 (85980841-85980666) | |
| 1207-1382, gnl|Mm7|chr5 (101046984-101046811) | |
| 1454-1572, gnl|bosTau2|chr6 (57970373-57970491) | |
| 1454-1572, gnl|canFam2|chr32 (11416269-11416497) | |
| 1454-1572, gnl|danRer3|chr5 (35462876-35462656) | |
| 1454-1572, gnl|dasNov1|scaffold_5983 (94858-95079) | |
| 1454-1572, gnl|echTel1|scaffold_265195 (2878-2650) | |
| 1454-1572, gnl|fr1|chrUn (245446706-245446467) | |
| 1454-1572, gnl|galGal2|chr4 (47551972-47551745) | |
| 1454-1572, gnl|hg17|chr4 (85974300-85974528) | |
| 1454-1572, gnl|Hg17|chr4 (85974516-85974398) | |
| 1454-1572, gnl|loxAfr1|scaffold_1559 (32483-32255) | |
| 1454-1572, gnl|mm7|chr5 (101043750-101043978) | |
| 1454-1572, gnl|Mm7|chr5 (101043966-101043848) | |
| 1454-1572, gnl|monDom2|scaffold_37 (18712319-18712547) | |
| 1454-1572, gnl|oryCun1|scaffold_116840 (638-409) | |
| 1454-1572, gnl|panTro1|chr3 (47705978-47705750) | |
| 1454-1572, gnl|rheMac2|chr5 (44826219-44825991) | |
| 1454-1572, gnl|rn3|chr14 (9044428-9044200) | |
| 1454-1572, gnl|tetNig1|chr12 (3552743-3552981) | |
| 1454-1572, gnl|xenTro1|scaffold_304 (764074-764302) |
| Aligned organism(s): 95 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 33-209, gnl|bosTau2|chr6 (57942472-57942648) | |
| 33-209, gnl|canFam2|chr32 (11445125-11445262) | |
| 33-209, gnl|danRer3|chr5 (35451659-35451522) | |
| 33-209, gnl|dasNov1|scaffold_274211 (141-4) | |
| 33-209, gnl|echTel1|scaffold_283366 (34436-34299) | |
| 33-209, gnl|fr1|chrUn (245443337-245443200) | |
| 33-209, gnl|galGal2|chr4 (47542757-47542620) | |
| 33-209, gnl|hg17|chr4 (86002757-86002894) | |
| 33-209, gnl|Hg17|chr4 (86002933-86002757) | |
| 33-209, gnl|loxAfr1|scaffold_1559 (7996-7859) | |
| 33-209, gnl|mm7|chr5 (101064200-101064337) | |
| 33-209, gnl|Mm7|chr5 (101064376-101064200) | |
| 33-209, gnl|monDom2|scaffold_37 (18743657-18743794) | |
| 33-209, gnl|oryCun1|scaffold_211496 (167983-168120) | |
| 33-209, gnl|panTro1|chr3 (47677393-47677256) | |
| 33-209, gnl|rheMac2|chr5 (44798648-44798511) | |
| 33-209, gnl|rn3|chr14 (9024774-9024637) | |
| 33-209, gnl|tetNig1|chr12 (3556143-3556280) | |
| 33-209, gnl|xenTro1|scaffold_304 (798436-798573) | |
| 371-521, gnl|bosTau2|chr6 (57948470-57948620) | |
| 371-521, gnl|canFam2|chr32 (11440078-11440278) | |
| 371-521, gnl|danRer3|chr5 (35455164-35454973) | |
| 371-521, gnl|dasNov1|scaffold_56293 (11593-11387) | |
| 371-521, gnl|echTel1|scaffold_283366 (40578-40387) | |
| 371-521, gnl|fr1|chrUn (245444067-245443886) | |
| 371-521, gnl|galGal2|chr4 (47544385-47544205) | |
| 371-521, gnl|hg17|chr4 (85996749-85996951) | |
| 371-521, gnl|Hg17|chr4 (85996904-85996754) | |
| 371-521, gnl|mm7|chr5 (101058316-101058503) | |
| 371-521, gnl|Mm7|chr5 (101058471-101058321) | |
| 371-521, gnl|monDom2|scaffold_37 (18733811-18733986) | |
| 371-521, gnl|oryCun1|scaffold_208217 (4014-4216) | |
| 371-521, gnl|panTro1|chr3 (47683416-47683211) | |
| 371-521, gnl|rheMac2|chr5 (44804654-44804452) | |
| 371-521, gnl|rn3|chr14 (9030571-9030371) | |
| 371-521, gnl|tetNig1|chr12 (3555372-3555533) | |
| 371-521, gnl|xenTro1|scaffold_304 (794795-794990) | |
| 522-642, gnl|bosTau2|chr6 (57950361-57950483) | |
| 522-642, gnl|canFam2|chr32 (11438838-11438998) | |
| 522-642, gnl|danRer3|chr5 (35455778-35455627) | |
| 522-642, gnl|echTel1|scaffold_283366 (42032-41872) | |
| 522-642, gnl|fr1|chrUn (245444488-245444353) | |
| 522-642, gnl|galGal2|chr4 (47544787-47544627) | |
| 522-642, gnl|hg17|chr4 (85995207-85995367) | |
| 522-642, gnl|Hg17|chr4 (85995348-85995228) | |
| 522-642, gnl|loxAfr1|scaffold_1559 (15724-15570) | |
| 522-642, gnl|mm7|chr5 (101056372-101056533) | |
| 522-642, gnl|Mm7|chr5 (101056513-101056393) | |
| 522-642, gnl|monDom2|scaffold_37 (18728132-18728295) | |
| 522-642, gnl|panTro1|chr3 (47684954-47684794) | |
| 522-642, gnl|rheMac2|chr5 (44805922-44805762) | |
| 522-642, gnl|rn3|chr14 (9032815-9032668) | |
| 522-642, gnl|tetNig1|chr12 (3554881-3555016) | |
| 522-642, gnl|xenTro1|scaffold_304 (794175-794322) | |
| 983-1103, gnl|bosTau2|chr6 (57960860-57960980) | |
| 983-1103, gnl|canFam2|chr32 (11430703-11430865) | |
| 983-1103, gnl|danRer3|chr5 (35460049-35459898) | |
| 983-1103, gnl|dasNov1|scaffold_110073 (3238-3398) | |
| 983-1103, gnl|echTel1|scaffold_283366 (51778-51616) | |
| 983-1103, gnl|fr1|chrUn (245445637-245445489) | |
| 983-1103, gnl|galGal2|chr4 (47547248-47547088) | |
| 983-1103, gnl|hg17|chr4 (85983715-85983877) | |
| 983-1103, gnl|Hg17|chr4 (85983845-85983725) | |
| 983-1103, gnl|loxAfr1|scaffold_1559 (24396-24235) | |
| 983-1103, gnl|mm7|chr5 (101049713-101049875) | |
| 983-1103, gnl|Mm7|chr5 (101049843-101049723) | |
| 983-1103, gnl|monDom2|scaffold_37 (18716066-18716242) | |
| 983-1103, gnl|oryCun1|scaffold_127515 (7629-7467) | |
| 983-1103, gnl|panTro1|chr3 (47696450-47696288) | |
| 983-1103, gnl|rheMac2|chr5 (44817140-44816978) | |
| 983-1103, gnl|rn3|chr14 (9039567-9039405) | |
| 983-1103, gnl|tetNig1|chr12 (3553737-3553872) | |
| 983-1103, gnl|xenTro1|scaffold_304 (781321-781501) | |
| 1207-1382, gnl|bosTau2|chr6 (57964544-57964719) | |
| 1207-1382, gnl|Hg17|chr4 (85980841-85980666) | |
| 1207-1382, gnl|Mm7|chr5 (101046984-101046811) | |
| 1454-1572, gnl|bosTau2|chr6 (57970373-57970491) | |
| 1454-1572, gnl|canFam2|chr32 (11416269-11416497) | |
| 1454-1572, gnl|danRer3|chr5 (35462876-35462656) | |
| 1454-1572, gnl|dasNov1|scaffold_5983 (94858-95079) | |
| 1454-1572, gnl|echTel1|scaffold_265195 (2878-2650) | |
| 1454-1572, gnl|fr1|chrUn (245446706-245446467) | |
| 1454-1572, gnl|galGal2|chr4 (47551972-47551745) | |
| 1454-1572, gnl|hg17|chr4 (85974300-85974528) | |
| 1454-1572, gnl|Hg17|chr4 (85974516-85974398) | |
| 1454-1572, gnl|loxAfr1|scaffold_1559 (32483-32255) | |
| 1454-1572, gnl|mm7|chr5 (101043750-101043978) | |
| 1454-1572, gnl|Mm7|chr5 (101043966-101043848) | |
| 1454-1572, gnl|monDom2|scaffold_37 (18712319-18712547) | |
| 1454-1572, gnl|oryCun1|scaffold_116840 (638-409) | |
| 1454-1572, gnl|panTro1|chr3 (47705978-47705750) | |
| 1454-1572, gnl|rheMac2|chr5 (44826219-44825991) | |
| 1454-1572, gnl|rn3|chr14 (9044428-9044200) | |
| 1454-1572, gnl|tetNig1|chr12 (3552743-3552981) | |
| 1454-1572, gnl|xenTro1|scaffold_304 (764074-764302) |