Non-Coding RNA Search

Ss1.1-Ova1-OVRM10215G05.5

Sequence:


               
               AAAAGTTGCACGGCGGAAAGGAGCGGCCCTGGGACGGGCAGTAAGCGCGACGCGGAGCCG
GTTCCCGGCGCCTGCGGCCACGCCATGGACGACCTCGACGCTCTGCTGGCAGACTTGGAG
TCCACCACCTCCCATATCTCCAAACGGCCTGTGTTCTTGTCAGAGGAGACCCCATACTCG
TACCCAACTGGAAACCACACATACCAGGAGATTGCCGTGCCACCCCCTGTCCCCCCACCC
CCATCCAGTGAGGCCCTCAATGGCTCAGTTCTTGACCCGATAGACCAGTGGCAACCCAGC
ACCTCCCGATTCATCCACCAGCAGCCTCAGGCCCCATCCCCTGTGTACGGCTCCAGTGCC
AAAACTTCCAGTTCCTCCAACCCCCAGGACGGCATCGGCCTTCCGTGTCCACGAGCCAGC
GAGGAGGAGCACGTGTACAGCTTTCCCAACAAGCAGAAGTCGGCTGAGCCTTCACCCACC
GTCATGAGCTCCTCCTTGGGCAGCAACCTTTCTGAACTTGACCGTCTGCTGCTGGAGCTG
AATGCTGTGCAGCATAACGCCCCAGGCTTCCCCACAGATGGGGCCAACTCAAGCCCCCCA
CTGCCTGGGGCTCTGAGCCCACACTATGGCGTCCTGGAACACAACAGCTCACTGGGGGGC
AAAGTGGGGCCGGTGACCAAAGAGAAGCCCAAGCGGAATGGAGGCCGCGGCCTGNAGGAT
GTGCGCCCCAGCGTGGAGAGTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGTTGCACGGCGGAAAGGAGCGGCCCTGGGACGGGCAGTAAGCGCGACGCGGAGCCG
GTTCCCGGCGCCTGCGGCCACGCCATGGACGACCTCGACGCTCTGCTGGCAGACTTGGAG
TCCACCACCTCCCATATCTCCAAACGGCCTGTGTTCTTGTCAGAGGAGACCCCATACTCG
TACCCAACTGGAAACCACACATACCAGGAGATTGCCGTGCCACCCCCTGTCCCCCCACCC
CCATCCAGTGAGGCCCTCAATGGCTCAGTTCTTGACCCGATAGACCAGTGGCAACCCAGC
ACCTCCCGATTCATCCACCAGCAGCCTCAGGCCCCATCCCCTGTGTACGGCTCCAGTGCC
AAAACTTCCAGTTCCTCCAACCCCCAGGACGGCATCGGCCTTCCGTGTCCACGAGCCAGC
GAGGAGGAGCACGTGTACAGCTTTCCCAACAAGCAGAAGTCGGCTGAGCCTTCACCCACC
GTCATGAGCTCCTCCTTGGGCAGCAACCTTTCTGAACTTGACCGTCTGCTGCTGGAGCTG
AATGCTGTGCAGCATAACGCCCCAGGCTTCCCCACAGATGGGGCCAACTCAAGCCCCCCA
CTGCCTGGGGCTCTGAGCCCACACTATGGCGTCCTGGAACACAACAGCTCACTGGGGGGC
AAAGTGGGGCCGGTGACCAAAGAGAAGCCCAAGCGGAATGGAGGCCGCGGCCTGNAGGAT
GTGCGCCCCAGCGTGGAGAGTCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61811513|ref|XP_595626.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61811513|ref|XP_595626.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               97-324, gnl|bosTau2|chr17 (38442848-38443072)
               

               
               97-324, gnl|Hg17|chr12 (119124901-119124674)
               

               
               97-324, gnl|Mm7|chr5 (114765116-114765343)
               


               
               439-582, gnl|bosTau2|chr17 (38443864-38444007)
               

               
               439-582, gnl|Hg17|chr12 (119123524-119123381)
               

               
               439-582, gnl|Mm7|chr5 (114766297-114766440)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               97-324, gnl|bosTau2|chr17 (38442848-38443072)
               

               
               97-324, gnl|Hg17|chr12 (119124901-119124674)
               

               
               97-324, gnl|Mm7|chr5 (114765116-114765343)
               


               
               439-582, gnl|bosTau2|chr17 (38443864-38444007)
               

               
               439-582, gnl|Hg17|chr12 (119123524-119123381)
               

               
               439-582, gnl|Mm7|chr5 (114766297-114766440)

	97-324, gnl\|bosTau2\|chr17 (38442848-38443072)
	97-324, gnl\|Hg17\|chr12 (119124901-119124674)
	97-324, gnl\|Mm7\|chr5 (114765116-114765343)

	439-582, gnl\|bosTau2\|chr17 (38443864-38444007)
	439-582, gnl\|Hg17\|chr12 (119123524-119123381)
	439-582, gnl\|Mm7\|chr5 (114766297-114766440)