Non-Coding RNA Search

Ss1.1-Ova1-OVRM10217D10.5

Sequence:


               
               TTATAAATCTCTGCCTAAACCTTCCCAGCTGGGACTTGGGTTAGTCTTTCTGCTGTGGAT
CCAGGGCTTTGTTCTCCTGTTCAGCCTCGGCTCGGCCTGGAATAATTCAGAAACGTATTA
GAGAGATTGCCGCTCCCAAAAGGCATAAGGAAATAACCTTCACTCCCGGCCTTAGGGAAA
TCAGCCCAATCAGGGTCCGGGCAGATTTCTCGATTAAACAAAGAACTAACTGTGCACAAA
TTGCACCTTAACAATTTGTAAAGAGTCCACCTTAGAAATGTCTTGCAGATGGAAAGCTGA
TATTTTTTAATCAGGGCAGCGGGGCTGCAAAAGTCAAAGTGTCACCAGCATTTTCCCACT
GCTCCCCAGTGAACATCCCCCCCAAATTAAATGGAAGGGTGCATTCATGCGCGGTCCACC
GCTTCAGACCCACGTCTCTGGGTTGTGGGGCCTAGATGGCAGTAATTCCTGCTGTCCACG
CAAGGGCTCAGGGTGCGGGCGTGGGGGCCTGTGTGTCTGTGAGTATGCGTGGATGAGTCC
GTTCGTCTGGAACGCATCCCAGGGAGCTCTGGGCTGTCAATTTTTATTTCAGCAAAGTTC
ATATTGGGAGCCCAGAAGGGGGCGGAGCGTTATTGCGTCGAATGTTGCTGTGCTCCTTAG
TCAGATTATTTAGAAATCAAAGTCAGGCCCCTGTGTGGCTGTGGAATGGTGTTTAGAAGA
AGCCTTTTTGGAAAGATTGCGTGGATTTCTGCCCATTATAAGGGGTGCTCGTGCCAAACC
ACCGCCCTTCTGACATTTTTAGAGAAATGACTGTGTCTTTTGATGGGGATTCTGGGGATC
AGGAAGGTGTGTCAGTTCGAGATCCGTCCTACTTGCGGTAATTGTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATAAATCTCTGCCTAAACCTTCCCAGCTGGGACTTGGGTTAGTCTTTCTGCTGTGGAT
CCAGGGCTTTGTTCTCCTGTTCAGCCTCGGCTCGGCCTGGAATAATTCAGAAACGTATTA
GAGAGATTGCCGCTCCCAAAAGGCATAAGGAAATAACCTTCACTCCCGGCCTTAGGGAAA
TCAGCCCAATCAGGGTCCGGGCAGATTTCTCGATTAAACAAAGAACTAACTGTGCACAAA
TTGCACCTTAACAATTTGTAAAGAGTCCACCTTAGAAATGTCTTGCAGATGGAAAGCTGA
TATTTTTTAATCAGGGCAGCGGGGCTGCAAAAGTCAAAGTGTCACCAGCATTTTCCCACT
GCTCCCCAGTGAACATCCCCCCCAAATTAAATGGAAGGGTGCATTCATGCGCGGTCCACC
GCTTCAGACCCACGTCTCTGGGTTGTGGGGCCTAGATGGCAGTAATTCCTGCTGTCCACG
CAAGGGCTCAGGGTGCGGGCGTGGGGGCCTGTGTGTCTGTGAGTATGCGTGGATGAGTCC
GTTCGTCTGGAACGCATCCCAGGGAGCTCTGGGCTGTCAATTTTTATTTCAGCAAAGTTC
ATATTGGGAGCCCAGAAGGGGGCGGAGCGTTATTGCGTCGAATGTTGCTGTGCTCCTTAG
TCAGATTATTTAGAAATCAAAGTCAGGCCCCTGTGTGGCTGTGGAATGGTGTTTAGAAGA
AGCCTTTTTGGAAAGATTGCGTGGATTTCTGCCCATTATAAGGGGTGCTCGTGCCAAACC
ACCGCCCTTCTGACATTTTTAGAGAAATGACTGTGTCTTTTGATGGGGATTCTGGGGATC
AGGAAGGTGTGTCAGTTCGAGATCCGTCCTACTTGCGGTAATTGTTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               119-278, - strand, RNAz p=0.963168

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               119-278, - strand, RNAz p=0.963168

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-853, gnl|bosTau2|chr4 (45640836-45641682)
               

               
               1-853, gnl|Hg17|chr7 (41933313-41932450)
               

               
               1-853, gnl|Mm7|chr13 (14943855-14944653)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-853, gnl|bosTau2|chr4 (45640836-45641682)
               

               
               1-853, gnl|Hg17|chr7 (41933313-41932450)
               

               
               1-853, gnl|Mm7|chr13 (14943855-14944653)

	1-853, gnl\|bosTau2\|chr4 (45640836-45641682)
	1-853, gnl\|Hg17\|chr7 (41933313-41932450)
	1-853, gnl\|Mm7\|chr13 (14943855-14944653)