Ss1.1-Ova1-OVRM10225B11.5
|
AGGGTGCCCAACAAGGATCTCAAGATCTTAAGGTGGGGTGTGCGCTGAGCGATGGGATTG
GCCAAGACAAAGGAGAGAACTTAGAAGAGAAAAAATGGGGCCCAGGACTGAGGGGCGGGG
CCTGGACACCGTGGGAAGGAGCGTCAGCGACGGCAAACGCCGAGAGGGGCGTGGCCTAGG
CCGAGCCAAGCGGTCATTAGGTTCCTGCAAGGTGCTTGGGAGCTGATCAAGACTTCAAGC
TAAAGATGGTGATGCTGAGTCGCCTGAGGGTCATTCTTCAAGCCTCTCCGTGCAGGGCAC
TGTGGAGAAGGTTCCAGATTCCGAGGTCCATGTCAGCGAGACCTTGCAGCCTCTACACCT
GCACTTACAAAACCCGGAACCGAGACTGTGAGTACACGGCCGCCCTGGGACAGCGGAAGG
CTGGTTGTTTCCTGACGGTGTCCTGGGTTGAGTGTTGGCACCTCTGATGTCAGTGGCATC
CCAGACTGGGGTTGGAGGTCTTGAGAACTGTGACAAGAACCCAAAATTTCTCTGTTTGTC
TTCTACAACAAGCGTGCAAAGTTCTTTTGTCCCCCTAGCTTTACTGAGATAAACCCATAT
GGGATGCGGTATCAGCTTAGTAAGACGGACATCGTGATGATTTGATACACGCATATGTTG
CAAAGTGATCATCACGATAAGGTGTGCAAAGCACGTTCACTGGCCAAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGGTGCCCAACAAGGATCTCAAGATCTTAAGGTGGGGTGTGCGCTGAGCGATGGGATTG
GCCAAGACAAAGGAGAGAACTTAGAAGAGAAAAAATGGGGCCCAGGACTGAGGGGCGGGG
CCTGGACACCGTGGGAAGGAGCGTCAGCGACGGCAAACGCCGAGAGGGGCGTGGCCTAGG
CCGAGCCAAGCGGTCATTAGGTTCCTGCAAGGTGCTTGGGAGCTGATCAAGACTTCAAGC
TAAAGATGGTGATGCTGAGTCGCCTGAGGGTCATTCTTCAAGCCTCTCCGTGCAGGGCAC
TGTGGAGAAGGTTCCAGATTCCGAGGTCCATGTCAGCGAGACCTTGCAGCCTCTACACCT
GCACTTACAAAACCCGGAACCGAGACTGTGAGTACACGGCCGCCCTGGGACAGCGGAAGG
CTGGTTGTTTCCTGACGGTGTCCTGGGTTGAGTGTTGGCACCTCTGATGTCAGTGGCATC
CCAGACTGGGGTTGGAGGTCTTGAGAACTGTGACAAGAACCCAAAATTTCTCTGTTTGTC
TTCTACAACAAGCGTGCAAAGTTCTTTTGTCCCCCTAGCTTTACTGAGATAAACCCATAT
GGGATGCGGTATCAGCTTAGTAAGACGGACATCGTGATGATTTGATACACGCATATGTTG
CAAAGTGATCATCACGATAAGGTGTGCAAAGCACGTTCACTGGCCAAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
192-536, gnl|bosTau2|chrX (39858863-39859201) |
|
192-536, gnl|canFam2|chrX (11948362-11948896) |
|
192-536, gnl|dasNov1|scaffold_38871 (7372-6867) |
|
192-536, gnl|echTel1|scaffold_64358 (3950-4482) |
|
192-536, gnl|galGal2|chr11 (18344523-18344029) |
|
192-536, gnl|hg17|chrX (15527442-15527972) |
|
192-536, gnl|Hg17|chrX (15527750-15528177) |
|
192-536, gnl|loxAfr1|scaffold_179257 (753-243) |
|
192-536, gnl|mm7|chrX (158789647-158789141) |
|
192-536, gnl|Mm7|chrX (158789357-158789078) |
|
192-536, gnl|monDom2|scaffold_25 (24316703-24316199) |
|
192-536, gnl|oryCun1|scaffold_202649 (176170-175650) |
|
192-536, gnl|panTro1|chrX (15996893-15997423) |
|
192-536, gnl|rheMac2|chrX (13509867-13510396) |
|
192-536, gnl|rn3|chrX (51294616-51295128) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
192-536, gnl|bosTau2|chrX (39858863-39859201) |
|
192-536, gnl|canFam2|chrX (11948362-11948896) |
|
192-536, gnl|dasNov1|scaffold_38871 (7372-6867) |
|
192-536, gnl|echTel1|scaffold_64358 (3950-4482) |
|
192-536, gnl|galGal2|chr11 (18344523-18344029) |
|
192-536, gnl|hg17|chrX (15527442-15527972) |
|
192-536, gnl|Hg17|chrX (15527750-15528177) |
|
192-536, gnl|loxAfr1|scaffold_179257 (753-243) |
|
192-536, gnl|mm7|chrX (158789647-158789141) |
|
192-536, gnl|Mm7|chrX (158789357-158789078) |
|
192-536, gnl|monDom2|scaffold_25 (24316703-24316199) |
|
192-536, gnl|oryCun1|scaffold_202649 (176170-175650) |
|
192-536, gnl|panTro1|chrX (15996893-15997423) |
|
192-536, gnl|rheMac2|chrX (13509867-13510396) |
|
192-536, gnl|rn3|chrX (51294616-51295128) |
