Ss1.1-Ova2-C0003104_G10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGCGGGAAAATGGGAGGTCCCTCTACCCAAAGTTCGTGCCCAAGGAGAAACAGAAGTA TTGAAAGTTATTCGAACAGGAAAAAGAAAAAAGAAGGCATGGAAGAGAATGGTTACAAAA GTCTGCTTTGTTGGTGATGGTTTTACAAGAAAACCACCTAAATATGAAAGGTTCATTAGG CCAATGGGTCTACGTTTCAAAAAAGCCCATGTCACACACCCTGAGCTGAAAGCTACCTTT TGCCTGCCTATACTCGGTGTGAAAAAGAACCCCTCCTCCCCGTTATATACAACCCTGGGT GTGATCACCAAAGGGACAGTCATTGAAGTGAATGTAAGCGAGCTGGGCCTTGTGACACAA GGAGGCAAGGTCATTTGGGGAAAGTATGCTCAAGTTACCAACAATCCTGAAAATGATGGG TGCATAAATGCAGTCTTGCTGGTTTGACAGTGACATCATACAAGTCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGCGGGAAAATGGGAGGTCCCTCTACCCAAAGTTCGTGCCCAAGGAGAAACAGAAGTA TTGAAAGTTATTCGAACAGGAAAAAGAAAAAAGAAGGCATGGAAGAGAATGGTTACAAAA GTCTGCTTTGTTGGTGATGGTTTTACAAGAAAACCACCTAAATATGAAAGGTTCATTAGG CCAATGGGTCTACGTTTCAAAAAAGCCCATGTCACACACCCTGAGCTGAAAGCTACCTTT TGCCTGCCTATACTCGGTGTGAAAAAGAACCCCTCCTCCCCGTTATATACAACCCTGGGT GTGATCACCAAAGGGACAGTCATTGAAGTGAATGTAAGCGAGCTGGGCCTTGTGACACAA GGAGGCAAGGTCATTTGGGGAAAGTATGCTCAAGTTACCAACAATCCTGAAAATGATGGG TGCATAAATGCAGTCTTGCTGGTTTGACAGTGACATCATACAAGTCAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 352-468, + strand, RNAz p=0.613741 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 352-468, + strand, RNAz p=0.613741 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-468, gnl|bosTau2|chr21 (19968884-19969351) | |
| 1-468, gnl|Hg17|chrX (99972179-99972638) | |
| 1-468, gnl|Mm7|chrX (146172789-146172322) | |
| 6-187, gnl|bosTau2|chr20 (3418217-3418398) | |
| 6-187, gnl|canFam2|chr2 (60180048-60179871) | |
| 6-187, gnl|canFam2|chr2 (60179869-60180085) | |
| 6-187, gnl|danRer3|chr14 (37422677-37422500) | |
| 6-187, gnl|danRer3|chr14 (37422498-37422713) | |
| 6-187, gnl|dasNov1|scaffold_16937 (5904-5727) | |
| 6-187, gnl|dasNov1|scaffold_16937 (5725-5941) | |
| 6-187, gnl|echTel1|scaffold_160208 (7133-7306) | |
| 6-187, gnl|echTel1|scaffold_63700 (1006-830) | |
| 6-187, gnl|fr1|chrUn (74260422-74260245) | |
| 6-187, gnl|fr1|chrUn (74260243-74260431) | |
| 6-187, gnl|galGal2|chrZ (9916484-9916307) | |
| 6-187, gnl|galGal2|chrZ (9916305-9916520) | |
| 6-187, gnl|hg17|chr1 (200358011-200358188) | |
| 6-187, gnl|hg17|chr5 (74102212-74102427) | |
| 6-187, gnl|Hg17|chr5 (74102211-74102392) | |
| 6-187, gnl|loxAfr1|scaffold_10044 (8310-8487) | |
| 6-187, gnl|loxAfr1|scaffold_26518 (24653-24437) | |
| 6-187, gnl|mm7|chr13 (94204124-94203910) | |
| 6-187, gnl|Mm7|chr13 (94204123-94203942) | |
| 6-187, gnl|mm7|chr19 (22139789-22139612) | |
| 6-187, gnl|monDom2|scaffold_210 (521484-521661) | |
| 6-187, gnl|monDom2|scaffold_60 (8823104-8823320) | |
| 6-187, gnl|oryCun1|scaffold_157952 (306-512) | |
| 6-187, gnl|oryCun1|scaffold_207434 (43176-42999) | |
| 6-187, gnl|panTro1|chr1 (183291467-183291644) | |
| 6-187, gnl|panTro1|chr4 (41350491-41350276) | |
| 6-187, gnl|rheMac2|chr1 (166765820-166765643) | |
| 6-187, gnl|rheMac2|chr6 (70958244-70958459) | |
| 6-187, gnl|rn3|chr2 (27530662-27530448) | |
| 6-187, gnl|rn3|chr3 (59917595-59917420) | |
| 6-187, gnl|tetNig1|chrUn_random (2793041-2793218) | |
| 6-187, gnl|tetNig1|chrUn_random (2793220-2793009) | |
| 6-187, gnl|xenTro1|scaffold_120 (1841888-1841711) | |
| 6-187, gnl|xenTro1|scaffold_120 (1841709-1841899) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-468, gnl|bosTau2|chr21 (19968884-19969351) | |
| 1-468, gnl|Hg17|chrX (99972179-99972638) | |
| 1-468, gnl|Mm7|chrX (146172789-146172322) | |
| 6-187, gnl|bosTau2|chr20 (3418217-3418398) | |
| 6-187, gnl|canFam2|chr2 (60180048-60179871) | |
| 6-187, gnl|canFam2|chr2 (60179869-60180085) | |
| 6-187, gnl|danRer3|chr14 (37422677-37422500) | |
| 6-187, gnl|danRer3|chr14 (37422498-37422713) | |
| 6-187, gnl|dasNov1|scaffold_16937 (5904-5727) | |
| 6-187, gnl|dasNov1|scaffold_16937 (5725-5941) | |
| 6-187, gnl|echTel1|scaffold_160208 (7133-7306) | |
| 6-187, gnl|echTel1|scaffold_63700 (1006-830) | |
| 6-187, gnl|fr1|chrUn (74260422-74260245) | |
| 6-187, gnl|fr1|chrUn (74260243-74260431) | |
| 6-187, gnl|galGal2|chrZ (9916484-9916307) | |
| 6-187, gnl|galGal2|chrZ (9916305-9916520) | |
| 6-187, gnl|hg17|chr1 (200358011-200358188) | |
| 6-187, gnl|hg17|chr5 (74102212-74102427) | |
| 6-187, gnl|Hg17|chr5 (74102211-74102392) | |
| 6-187, gnl|loxAfr1|scaffold_10044 (8310-8487) | |
| 6-187, gnl|loxAfr1|scaffold_26518 (24653-24437) | |
| 6-187, gnl|mm7|chr13 (94204124-94203910) | |
| 6-187, gnl|Mm7|chr13 (94204123-94203942) | |
| 6-187, gnl|mm7|chr19 (22139789-22139612) | |
| 6-187, gnl|monDom2|scaffold_210 (521484-521661) | |
| 6-187, gnl|monDom2|scaffold_60 (8823104-8823320) | |
| 6-187, gnl|oryCun1|scaffold_157952 (306-512) | |
| 6-187, gnl|oryCun1|scaffold_207434 (43176-42999) | |
| 6-187, gnl|panTro1|chr1 (183291467-183291644) | |
| 6-187, gnl|panTro1|chr4 (41350491-41350276) | |
| 6-187, gnl|rheMac2|chr1 (166765820-166765643) | |
| 6-187, gnl|rheMac2|chr6 (70958244-70958459) | |
| 6-187, gnl|rn3|chr2 (27530662-27530448) | |
| 6-187, gnl|rn3|chr3 (59917595-59917420) | |
| 6-187, gnl|tetNig1|chrUn_random (2793041-2793218) | |
| 6-187, gnl|tetNig1|chrUn_random (2793220-2793009) | |
| 6-187, gnl|xenTro1|scaffold_120 (1841888-1841711) | |
| 6-187, gnl|xenTro1|scaffold_120 (1841709-1841899) |