Non-Coding RNA Search

Ss1.1-Ova2-C0003105_P03.5

Sequence:


               
               CCACGCTGCCCTACGAAAAGCGCCTCTCCAAGGTAGACACGCTGCGCTTAGCCATAGGCT
ACATTAACTTCCTCAGCGAGCTGGTGCAAGCCGACTTGCCACTGCGCGGGAGTGGCACAG
GTGGTTGCGGGGGCCCAGGTGGCAGCCGGCACCTCGGAGGGGACAGCCCAGGTAACCAGG
CCCAGAAGGTCATCATCTGCCATCGAGGCACCCGTTCGCCCTCCCCCAGCGACCCGGACT
ACGGTCTCCCTCCTCTTGCAGGGCACTCCCTTTCCTGGGCTGATGAAAAACAGCTCAAAG
AACAAAATATTATTCGTACAGCTAAAGTGTGGACCCCAGAGGACCCCAGAAAACTCAACA
GTAAATCTTTTGACAACATAGAGAACGAACCACCTTTTGAGTTTGTGTCCTGAGAAAGCT
CTCACAGGCCGGCTGTGTCTTTGTGCATATTGTACGTGTAAATACCTATAATGTAAATGT
AATTTAAAGACCACATTTTTCTAATGGCAATCAACTGTTTGTTATTTATCTATTTATTAT
GCTGTTGAGTTAATGGAAATAGATTGTCTTTTTAAAATATATAATTTATATAATTTATCG
TGATATTCTATAATATGATTTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACGCTGCCCTACGAAAAGCGCCTCTCCAAGGTAGACACGCTGCGCTTAGCCATAGGCT
ACATTAACTTCCTCAGCGAGCTGGTGCAAGCCGACTTGCCACTGCGCGGGAGTGGCACAG
GTGGTTGCGGGGGCCCAGGTGGCAGCCGGCACCTCGGAGGGGACAGCCCAGGTAACCAGG
CCCAGAAGGTCATCATCTGCCATCGAGGCACCCGTTCGCCCTCCCCCAGCGACCCGGACT
ACGGTCTCCCTCCTCTTGCAGGGCACTCCCTTTCCTGGGCTGATGAAAAACAGCTCAAAG
AACAAAATATTATTCGTACAGCTAAAGTGTGGACCCCAGAGGACCCCAGAAAACTCAACA
GTAAATCTTTTGACAACATAGAGAACGAACCACCTTTTGAGTTTGTGTCCTGAGAAAGCT
CTCACAGGCCGGCTGTGTCTTTGTGCATATTGTACGTGTAAATACCTATAATGTAAATGT
AATTTAAAGACCACATTTTTCTAATGGCAATCAACTGTTTGTTATTTATCTATTTATTAT
GCTGTTGAGTTAATGGAAATAGATTGTCTTTTTAAAATATATAATTTATATAATTTATCG
TGATATTCTATAATATGATTTCCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|42742524|gb|AAQ74877.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|42742524|gb|AAQ74877.2|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-215, gnl|bosTau2|chr13 (18231447-18231233)
               

               
               1-215, gnl|Hg17|chr10 (23522037-23522251)
               

               
               1-215, gnl|Mm7|chr2 (19511582-19511796)
               


               
               216-617, gnl|bosTau2|chr13 (18230812-18230398)
               

               
               216-617, gnl|Hg17|chr10 (23522641-23523055)
               

               
               216-617, gnl|Mm7|chr2 (19512128-19512528)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-215, gnl|bosTau2|chr13 (18231447-18231233)
               

               
               1-215, gnl|Hg17|chr10 (23522037-23522251)
               

               
               1-215, gnl|Mm7|chr2 (19511582-19511796)
               


               
               216-617, gnl|bosTau2|chr13 (18230812-18230398)
               

               
               216-617, gnl|Hg17|chr10 (23522641-23523055)
               

               
               216-617, gnl|Mm7|chr2 (19512128-19512528)

	1-215, gnl\|bosTau2\|chr13 (18231447-18231233)
	1-215, gnl\|Hg17\|chr10 (23522037-23522251)
	1-215, gnl\|Mm7\|chr2 (19511582-19511796)

	216-617, gnl\|bosTau2\|chr13 (18230812-18230398)
	216-617, gnl\|Hg17\|chr10 (23522641-23523055)
	216-617, gnl\|Mm7\|chr2 (19512128-19512528)