Ss1.1-Ova2-C0003260_H07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCCATCTTCCTTGAGACTCCTGCGCCATGAGAGCGAAGTGGCGGAAGAAGAGAATGCG CAGGCTGAAGCGCAAGAGAAGAAAGATGAGGCAGAGGTCCAAGTAAACCATCTTGTGCAC CCACGAAGCCTGCGGGAGCAGAAGTAAGGGATGCTGAAGCCCGGAACAAGTGGTTGGACT GTATGCTGCTGTCGGTAATAAGTCTCAGTAGACCCGGAATGTCACCTCGCCGAGATCAGC TGGGAAAATGACTACCTTCCTCACAACCAAAACAGTCCCGCTGGCCCTCTGCCCTGGACC TTTGGCATTCTGGACTAGTTCTGTTCTCTTGTGGCCAAGTGTAACTCGTGTACAATAAAC CCTCTTGCTGTCAGCTGAAGAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCCATCTTCCTTGAGACTCCTGCGCCATGAGAGCGAAGTGGCGGAAGAAGAGAATGCG CAGGCTGAAGCGCAAGAGAAGAAAGATGAGGCAGAGGTCCAAGTAAACCATCTTGTGCAC CCACGAAGCCTGCGGGAGCAGAAGTAAGGGATGCTGAAGCCCGGAACAAGTGGTTGGACT GTATGCTGCTGTCGGTAATAAGTCTCAGTAGACCCGGAATGTCACCTCGCCGAGATCAGC TGGGAAAATGACTACCTTCCTCACAACCAAAACAGTCCCGCTGGCCCTCTGCCCTGGACC TTTGGCATTCTGGACTAGTTCTGTTCTCTTGTGGCCAAGTGTAACTCGTGTACAATAAAC CCTCTTGCTGTCAGCTGAAGAAGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-116, - strand, RNAz p=0.994875 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-116, - strand, RNAz p=0.994875 |
| Aligned organism(s): 79 entry(ies) | More info |
| Aligned organism(s): 79 entry(ies) | Help | Less info |
| 1-382, gnl|bosTau2|chr21 (19497337-19496940) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994417) | |
| 1-382, gnl|canFam2|chr9 (21994538-21994115) | |
| 1-382, gnl|canFam2|chr9 (21994537-21994116) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994538) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994417) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994541) | |
| 1-382, gnl|canFam2|chr9 (21994539-21994115) | |
| 1-382, gnl|dasNov1|scaffold_11307 (44257-44578) | |
| 1-382, gnl|dasNov1|scaffold_11307 (44276-44699) | |
| 1-382, gnl|dasNov1|scaffold_248693 (1053-602) | |
| 1-382, gnl|dasNov1|scaffold_248693 (1051-628) | |
| 1-382, gnl|dasNov1|scaffold_248693 (602-931) | |
| 1-382, gnl|dasNov1|scaffold_30037 (4834-5251) | |
| 1-382, gnl|dasNov1|scaffold_349 (68498-68946) | |
| 1-382, gnl|echTel1|scaffold_209179 (1246-1556) | |
| 1-382, gnl|echTel1|scaffold_209179 (1677-1240) | |
| 1-382, gnl|echTel1|scaffold_209179 (1675-1267) | |
| 1-382, gnl|echTel1|scaffold_209179 (1252-1680) | |
| 1-382, gnl|echTel1|scaffold_209179 (1241-1556) | |
| 1-382, gnl|echTel1|scaffold_209179 (1266-1676) | |
| 1-382, gnl|echTel1|scaffold_209179 (1678-1262) | |
| 1-382, gnl|hg17|chr1 (144197689-144198100) | |
| 1-382, gnl|hg17|chr10 (92860434-92860872) | |
| 1-382, gnl|hg17|chr12 (91979518-91979839) | |
| 1-382, gnl|hg17|chr14 (73539807-73540270) | |
| 1-382, gnl|hg17|chr18 (5222780-5223244) | |
| 1-382, gnl|Hg17|chr20 (21683880-21684285) | |
| 1-382, gnl|hg17|chr22 (34558802-34559124) | |
| 1-382, gnl|hg17|chr9 (89554202-89554628) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83065-83378) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83504-83042) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83497-83080) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83065-83527) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83065-83378) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83078-83498) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83499-83075) | |
| 1-382, gnl|mm7|chr2 (150668574-150668269) | |
| 1-382, gnl|mm7|chr2 (150668151-150668574) | |
| 1-382, gnl|mm7|chr2 (42250344-42250725) | |
| 1-382, gnl|mm7|chr2 (150668574-150668269) | |
| 1-382, gnl|mm7|chrX (88161388-88160965) | |
| 1-382, gnl|mm7|chrX (88161380-88160963) | |
| 1-382, gnl|mm7|chrX (88160965-88161384) | |
| 1-382, gnl|Mm7|chrX (88160976-88161379) | |
| 1-382, gnl|monDom2|scaffold_0 (7102741-7102252) | |
| 1-382, gnl|monDom2|scaffold_0 (7102746-7102425) | |
| 1-382, gnl|monDom2|scaffold_103 (894883-895197) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6491-6811) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6937-6486) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6502-6941) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6496-6811) | |
| 1-382, gnl|oryCun1|scaffold_82537 (3971-3558) | |
| 1-382, gnl|oryCun1|scaffold_82537 (3556-3974) | |
| 1-382, gnl|oryCun1|scaffold_83248 (2056-1634) | |
| 1-382, gnl|panTro1|chr1 (126716674-126717081) | |
| 1-382, gnl|panTro1|chr11 (73740458-73740884) | |
| 1-382, gnl|panTro1|chr15 (73315002-73315466) | |
| 1-382, gnl|panTro1|chr17 (7464669-7464207) | |
| 1-382, gnl|panTro1|chr21 (21622336-21622024) | |
| 1-382, gnl|panTro1|chr21 (21622328-21622024) | |
| 1-382, gnl|panTro1|chr8 (94578673-94579111) | |
| 1-382, gnl|rheMac2|chr1 (126915883-126916298) | |
| 1-382, gnl|rheMac2|chr15 (98212528-98212953) | |
| 1-382, gnl|rheMac2|chr18 (9045349-9044886) | |
| 1-382, gnl|rheMac2|chr6 (88925734-88925416) | |
| 1-382, gnl|rheMac2|chr7 (137097524-137097988) | |
| 1-382, gnl|rheMac2|chr7 (137097965-137097653) | |
| 1-382, gnl|rheMac2|chr9 (90638209-90638641) | |
| 1-382, gnl|rn3|chr1 (47099094-47098702) | |
| 1-382, gnl|rn3|chr15 (27896160-27895723) | |
| 1-382, gnl|rn3|chr15 (27896160-27895760) | |
| 1-382, gnl|rn3|chr2 (116252366-116252058) | |
| 1-382, gnl|rn3|chr2 (116252357-116251938) | |
| 1-382, gnl|rn3|chr2 (116252368-116252058) | |
| 1-382, gnl|rn3|chr2 (116251936-116252347) | |
| 5-219, gnl|bosTau2|chr13 (37979228-37979446) | |
| 5-219, gnl|Hg17|chr7 (136655836-136656062) | |
| 5-219, gnl|Mm7|chr13 (54264937-54264698) |
| Aligned organism(s): 79 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-382, gnl|bosTau2|chr21 (19497337-19496940) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994417) | |
| 1-382, gnl|canFam2|chr9 (21994538-21994115) | |
| 1-382, gnl|canFam2|chr9 (21994537-21994116) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994538) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994417) | |
| 1-382, gnl|canFam2|chr9 (21994115-21994541) | |
| 1-382, gnl|canFam2|chr9 (21994539-21994115) | |
| 1-382, gnl|dasNov1|scaffold_11307 (44257-44578) | |
| 1-382, gnl|dasNov1|scaffold_11307 (44276-44699) | |
| 1-382, gnl|dasNov1|scaffold_248693 (1053-602) | |
| 1-382, gnl|dasNov1|scaffold_248693 (1051-628) | |
| 1-382, gnl|dasNov1|scaffold_248693 (602-931) | |
| 1-382, gnl|dasNov1|scaffold_30037 (4834-5251) | |
| 1-382, gnl|dasNov1|scaffold_349 (68498-68946) | |
| 1-382, gnl|echTel1|scaffold_209179 (1246-1556) | |
| 1-382, gnl|echTel1|scaffold_209179 (1677-1240) | |
| 1-382, gnl|echTel1|scaffold_209179 (1675-1267) | |
| 1-382, gnl|echTel1|scaffold_209179 (1252-1680) | |
| 1-382, gnl|echTel1|scaffold_209179 (1241-1556) | |
| 1-382, gnl|echTel1|scaffold_209179 (1266-1676) | |
| 1-382, gnl|echTel1|scaffold_209179 (1678-1262) | |
| 1-382, gnl|hg17|chr1 (144197689-144198100) | |
| 1-382, gnl|hg17|chr10 (92860434-92860872) | |
| 1-382, gnl|hg17|chr12 (91979518-91979839) | |
| 1-382, gnl|hg17|chr14 (73539807-73540270) | |
| 1-382, gnl|hg17|chr18 (5222780-5223244) | |
| 1-382, gnl|Hg17|chr20 (21683880-21684285) | |
| 1-382, gnl|hg17|chr22 (34558802-34559124) | |
| 1-382, gnl|hg17|chr9 (89554202-89554628) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83065-83378) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83504-83042) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83497-83080) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83065-83527) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83065-83378) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83078-83498) | |
| 1-382, gnl|loxAfr1|scaffold_11982 (83499-83075) | |
| 1-382, gnl|mm7|chr2 (150668574-150668269) | |
| 1-382, gnl|mm7|chr2 (150668151-150668574) | |
| 1-382, gnl|mm7|chr2 (42250344-42250725) | |
| 1-382, gnl|mm7|chr2 (150668574-150668269) | |
| 1-382, gnl|mm7|chrX (88161388-88160965) | |
| 1-382, gnl|mm7|chrX (88161380-88160963) | |
| 1-382, gnl|mm7|chrX (88160965-88161384) | |
| 1-382, gnl|Mm7|chrX (88160976-88161379) | |
| 1-382, gnl|monDom2|scaffold_0 (7102741-7102252) | |
| 1-382, gnl|monDom2|scaffold_0 (7102746-7102425) | |
| 1-382, gnl|monDom2|scaffold_103 (894883-895197) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6491-6811) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6937-6486) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6502-6941) | |
| 1-382, gnl|oryCun1|scaffold_81933 (6496-6811) | |
| 1-382, gnl|oryCun1|scaffold_82537 (3971-3558) | |
| 1-382, gnl|oryCun1|scaffold_82537 (3556-3974) | |
| 1-382, gnl|oryCun1|scaffold_83248 (2056-1634) | |
| 1-382, gnl|panTro1|chr1 (126716674-126717081) | |
| 1-382, gnl|panTro1|chr11 (73740458-73740884) | |
| 1-382, gnl|panTro1|chr15 (73315002-73315466) | |
| 1-382, gnl|panTro1|chr17 (7464669-7464207) | |
| 1-382, gnl|panTro1|chr21 (21622336-21622024) | |
| 1-382, gnl|panTro1|chr21 (21622328-21622024) | |
| 1-382, gnl|panTro1|chr8 (94578673-94579111) | |
| 1-382, gnl|rheMac2|chr1 (126915883-126916298) | |
| 1-382, gnl|rheMac2|chr15 (98212528-98212953) | |
| 1-382, gnl|rheMac2|chr18 (9045349-9044886) | |
| 1-382, gnl|rheMac2|chr6 (88925734-88925416) | |
| 1-382, gnl|rheMac2|chr7 (137097524-137097988) | |
| 1-382, gnl|rheMac2|chr7 (137097965-137097653) | |
| 1-382, gnl|rheMac2|chr9 (90638209-90638641) | |
| 1-382, gnl|rn3|chr1 (47099094-47098702) | |
| 1-382, gnl|rn3|chr15 (27896160-27895723) | |
| 1-382, gnl|rn3|chr15 (27896160-27895760) | |
| 1-382, gnl|rn3|chr2 (116252366-116252058) | |
| 1-382, gnl|rn3|chr2 (116252357-116251938) | |
| 1-382, gnl|rn3|chr2 (116252368-116252058) | |
| 1-382, gnl|rn3|chr2 (116251936-116252347) | |
| 5-219, gnl|bosTau2|chr13 (37979228-37979446) | |
| 5-219, gnl|Hg17|chr7 (136655836-136656062) | |
| 5-219, gnl|Mm7|chr13 (54264937-54264698) |