Non-Coding RNA Search

Ss1.1-Ova2-C0003260_K02.5

Sequence:


               
               GCAGTGGCCATCCCTGCCATTGGTGCCCAGTACTCCATGTTCCAGGCAGCCCCGGCCCCT
AAAATAATTGAAGATGGCAAGATCCACACAATGGAACACATGATCAGCCCCATTGCGGTG
CAGCCAGACCCGGCCACTGCTGCTGCCGCCGCCGCTGCCGCTGCTGCTGCTGCTGTCATT
CCTGCGGTATCCACACCGCCGCCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACTGTG
GCACCAAATGTTCCGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTT
GCTGCTCCGGCCACTGCCACAATCGCCACACTACAGAAGAACGCTGCAGCCGCCGTGTAC
GGGGGCTACGCGGGCTACATACCTCAGGCCTTCCCTGCTGCTCTCCAGGTGCCCATCCAC
GACGTCTACCAGACTTACTGAGACCGGGGACCAGAAAGGCAAGCCACCAAACCCCGCCGA
AGGAACACTCTATTATTTATGAAGAAAGAACGTGTCGGGTTGACACACGTGTAAAACCTG
CAAGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTTTATATCCATGAAGTTTTC
ACTCATGTTTTTTTGAAAATGACTTTTCAATTTAGCAGGCCCGCGTTCATACATTTCTAA
GAGACTTGCGACGCCTCATGCCTTAACATCATCTTTTAAAGTTTGTATGCTCTACTGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGTGGCCATCCCTGCCATTGGTGCCCAGTACTCCATGTTCCAGGCAGCCCCGGCCCCT
AAAATAATTGAAGATGGCAAGATCCACACAATGGAACACATGATCAGCCCCATTGCGGTG
CAGCCAGACCCGGCCACTGCTGCTGCCGCCGCCGCTGCCGCTGCTGCTGCTGCTGTCATT
CCTGCGGTATCCACACCGCCGCCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACTGTG
GCACCAAATGTTCCGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTT
GCTGCTCCGGCCACTGCCACAATCGCCACACTACAGAAGAACGCTGCAGCCGCCGTGTAC
GGGGGCTACGCGGGCTACATACCTCAGGCCTTCCCTGCTGCTCTCCAGGTGCCCATCCAC
GACGTCTACCAGACTTACTGAGACCGGGGACCAGAAAGGCAAGCCACCAAACCCCGCCGA
AGGAACACTCTATTATTTATGAAGAAAGAACGTGTCGGGTTGACACACGTGTAAAACCTG
CAAGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTTTATATCCATGAAGTTTTC
ACTCATGTTTTTTTGAAAATGACTTTTCAATTTAGCAGGCCCGCGTTCATACATTTCTAA
GAGACTTGCGACGCCTCATGCCTTAACATCATCTTTTAAAGTTTGTATGCTCTACTGTGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q8NI53_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8NI53_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               605-709, - strand, RNAz p=0.968868

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               605-709, - strand, RNAz p=0.968868

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               208-709, gnl|bosTau2|chr6 (31242606-31242123)
               

               
               208-709, gnl|Hg17|chr4 (40269091-40268588)
               

               
               208-709, gnl|Mm7|chr5 (65374250-65373725)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               208-709, gnl|bosTau2|chr6 (31242606-31242123)
               

               
               208-709, gnl|Hg17|chr4 (40269091-40268588)
               

               
               208-709, gnl|Mm7|chr5 (65374250-65373725)

	208-709, gnl\|bosTau2\|chr6 (31242606-31242123)
	208-709, gnl\|Hg17\|chr4 (40269091-40268588)
	208-709, gnl\|Mm7\|chr5 (65374250-65373725)