Ss1.1-Ova2-C0003260_K20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTAGATACTCGGGGCTGTTAGGATTCTGGTCTCTGCTGATAATATCTCTAACTGCTGGAT TATCCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAACCAGGAATGT TTCCGCCTACTCCTCTTTCACCTGCTAGGTTCAAGAAACTGACTGGACATTCTTTCCACA TGGGCTACAGCATGGCAATTCTGAATGGTGTTGTAGCTGCTCTCACTGTGGCATGGTGCC TTATGTAAACCCACAATAGAACAACATTGTTGGTGAAAGTCATTGTTTTTGAAGTTACAG AAATGAAATTGCCTACTCAGAAGACTGAGAAATGTGATTCATATACATACTATCATCATC ATTATGGAAGACCTTATAGAGGCCATTTTTTAAATCTATAAGATGTTTACTTCATCTTTT TTTACTTTTGTGTAGTTTATATCTGTTACAGAAATTATTTCAGTGGAAATCAAACATGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTAGATACTCGGGGCTGTTAGGATTCTGGTCTCTGCTGATAATATCTCTAACTGCTGGAT TATCCTGTTGCAGCTTTTCTTGGACAGTGACTTACTTTGATTCTTTTGAACCAGGAATGT TTCCGCCTACTCCTCTTTCACCTGCTAGGTTCAAGAAACTGACTGGACATTCTTTCCACA TGGGCTACAGCATGGCAATTCTGAATGGTGTTGTAGCTGCTCTCACTGTGGCATGGTGCC TTATGTAAACCCACAATAGAACAACATTGTTGGTGAAAGTCATTGTTTTTGAAGTTACAG AAATGAAATTGCCTACTCAGAAGACTGAGAAATGTGATTCATATACATACTATCATCATC ATTATGGAAGACCTTATAGAGGCCATTTTTTAAATCTATAAGATGTTTACTTCATCTTTT TTTACTTTTGTGTAGTTTATATCTGTTACAGAAATTATTTCAGTGGAAATCAAACATGGA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 39-158, - strand, RNAz p=0.590029 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 39-158, - strand, RNAz p=0.590029 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 20-158, gnl|bosTau2|chr2 (9570374-9570512) | |
| 20-158, gnl|canFam2|chr19 (56751468-56751559) | |
| 20-158, gnl|canFam2|chr19 (56751405-56751622) | |
| 20-158, gnl|danRer3|chr6 (8811342-8811105) | |
| 20-158, gnl|echTel1|scaffold_318506 (20111-20020) | |
| 20-158, gnl|echTel1|scaffold_318506 (20169-19957) | |
| 20-158, gnl|hg17|chr2 (153416959-153417176) | |
| 20-158, gnl|Hg17|chr2 (153417014-153417152) | |
| 20-158, gnl|hg17|chr8 (81425986-81426077) | |
| 20-158, gnl|loxAfr1|scaffold_67438 (1820-1729) | |
| 20-158, gnl|loxAfr1|scaffold_67438 (1879-1666) | |
| 20-158, gnl|mm7|chr2 (53210234-53210324) | |
| 20-158, gnl|mm7|chr2 (53210192-53210394) | |
| 20-158, gnl|Mm7|chr2 (53210228-53210366) | |
| 20-158, gnl|monDom2|scaffold_2 (44002417-44002639) | |
| 20-158, gnl|oryCun1|scaffold_103526 (10864-10954) | |
| 20-158, gnl|oryCun1|scaffold_190160 (5596-5382) | |
| 20-158, gnl|panTro1|chr13 (42485494-42485711) | |
| 20-158, gnl|panTro1|chr7_random (37178927-37178836) | |
| 20-158, gnl|rheMac2|chr12 (16387867-16388085) | |
| 20-158, gnl|rheMac2|chr8 (82778949-82779040) | |
| 20-158, gnl|rn3|chr3 (34629765-34629856) | |
| 20-158, gnl|rn3|chr3 (34629723-34629925) | |
| 20-158, gnl|xenTro1|scaffold_524 (369735-369922) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-158, gnl|bosTau2|chr2 (9570374-9570512) | |
| 20-158, gnl|canFam2|chr19 (56751468-56751559) | |
| 20-158, gnl|canFam2|chr19 (56751405-56751622) | |
| 20-158, gnl|danRer3|chr6 (8811342-8811105) | |
| 20-158, gnl|echTel1|scaffold_318506 (20111-20020) | |
| 20-158, gnl|echTel1|scaffold_318506 (20169-19957) | |
| 20-158, gnl|hg17|chr2 (153416959-153417176) | |
| 20-158, gnl|Hg17|chr2 (153417014-153417152) | |
| 20-158, gnl|hg17|chr8 (81425986-81426077) | |
| 20-158, gnl|loxAfr1|scaffold_67438 (1820-1729) | |
| 20-158, gnl|loxAfr1|scaffold_67438 (1879-1666) | |
| 20-158, gnl|mm7|chr2 (53210234-53210324) | |
| 20-158, gnl|mm7|chr2 (53210192-53210394) | |
| 20-158, gnl|Mm7|chr2 (53210228-53210366) | |
| 20-158, gnl|monDom2|scaffold_2 (44002417-44002639) | |
| 20-158, gnl|oryCun1|scaffold_103526 (10864-10954) | |
| 20-158, gnl|oryCun1|scaffold_190160 (5596-5382) | |
| 20-158, gnl|panTro1|chr13 (42485494-42485711) | |
| 20-158, gnl|panTro1|chr7_random (37178927-37178836) | |
| 20-158, gnl|rheMac2|chr12 (16387867-16388085) | |
| 20-158, gnl|rheMac2|chr8 (82778949-82779040) | |
| 20-158, gnl|rn3|chr3 (34629765-34629856) | |
| 20-158, gnl|rn3|chr3 (34629723-34629925) | |
| 20-158, gnl|xenTro1|scaffold_524 (369735-369922) |