Ss1.1-Ova2-C0003263_B23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACAAGTGGTCCATCGGGCATCCGCACGGTGATCATGCGCCAGCACGGGATCATCCTGAA GACCGTGTACCCTCAGGCTGACAGCAACCTCCGGAGCATCGTGATGGAGCAGCTGGTGGC CCTGATTGACTGCTTCCTGGACAGCTACGTTTCCCAGCTGAAGTCTCTGGAGAAATCCAG TGACCAAGAAAGATACAGCAGTCTGGAAGTGGAATACCTACAGAAAAGATCGGAGCTCCT CTCTCCCCTTCTCACACTAGGCCAGTACCCATGGGCAGCTTCTCTGGCAGAGAAGTACTG TGACTTCGACATCCTGGTGCAGATGTGTGAGCAGACGGACAACCAGGCCCGACTCCAGCG CTACATGACCCAGTTCGCTGACCAGAATTTTTCAGACTTTCTCTTTCGTTGGTACCTGGA GAAAGGAAAGCGGGGCAAATTGCTATCTCAGCCCATTTCTCAGCATGGACAGTTGGCAAA TTTTTTGCAAGCCCATGAGCATCTCAGCTGGTTACATGAAATTAATAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACAAGTGGTCCATCGGGCATCCGCACGGTGATCATGCGCCAGCACGGGATCATCCTGAA GACCGTGTACCCTCAGGCTGACAGCAACCTCCGGAGCATCGTGATGGAGCAGCTGGTGGC CCTGATTGACTGCTTCCTGGACAGCTACGTTTCCCAGCTGAAGTCTCTGGAGAAATCCAG TGACCAAGAAAGATACAGCAGTCTGGAAGTGGAATACCTACAGAAAAGATCGGAGCTCCT CTCTCCCCTTCTCACACTAGGCCAGTACCCATGGGCAGCTTCTCTGGCAGAGAAGTACTG TGACTTCGACATCCTGGTGCAGATGTGTGAGCAGACGGACAACCAGGCCCGACTCCAGCG CTACATGACCCAGTTCGCTGACCAGAATTTTTCAGACTTTCTCTTTCGTTGGTACCTGGA GAAAGGAAAGCGGGGCAAATTGCTATCTCAGCCCATTTCTCAGCATGGACAGTTGGCAAA TTTTTTGCAAGCCCATGAGCATCTCAGCTGGTTACATGAAATTAATAG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 41-160, - strand, RNAz p=0.610951 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 41-160, - strand, RNAz p=0.610951 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 130-212, + strand, RNAmicro p=0.997395 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 2-251, gnl|bosTau2|chr28 (428036-428285) | |
| 2-251, gnl|canFam2|chr4 (12789221-12788956) | |
| 2-251, gnl|danRer3|chr1 (52632307-52632567) | |
| 2-251, gnl|dasNov1|scaffold_37980 (4371-4636) | |
| 2-251, gnl|echTel1|scaffold_322900 (7300-7551) | |
| 2-251, gnl|fr1|chrUn (150264697-150264438) | |
| 2-251, gnl|galGal2|chr3 (36187371-36187624) | |
| 2-251, gnl|hg17|chr1 (225907101-225907366) | |
| 2-251, gnl|Hg17|chr1 (225907355-225907106) | |
| 2-251, gnl|loxAfr1|scaffold_10024 (2603-2338) | |
| 2-251, gnl|mm7|chr8 (122502311-122502576) | |
| 2-251, gnl|Mm7|chr8 (122502565-122502316) | |
| 2-251, gnl|monDom2|scaffold_13 (57376843-57377108) | |
| 2-251, gnl|panTro1|chr1 (209744198-209744463) | |
| 2-251, gnl|rheMac2|chr1 (227491936-227491671) | |
| 2-251, gnl|rn3|chr19 (54110823-54111088) | |
| 2-251, gnl|tetNig1|chr18 (10011428-10011169) | |
| 2-251, gnl|xenTro1|scaffold_217 (28322-28065) | |
| 383-528, gnl|bosTau2|chr28 (431320-431465) | |
| 383-528, gnl|canFam2|chr4 (12792083-12791914) | |
| 383-528, gnl|danRer3|chr1 (52630075-52630244) | |
| 383-528, gnl|dasNov1|scaffold_37980 (1146-1316) | |
| 383-528, gnl|echTel1|scaffold_267850 (7343-7513) | |
| 383-528, gnl|fr1|chrUn (150265214-150265045) | |
| 383-528, gnl|galGal2|chr3 (36185608-36185774) | |
| 383-528, gnl|hg17|chr1 (225903086-225903255) | |
| 383-528, gnl|Hg17|chr1 (225903254-225903109) | |
| 383-528, gnl|loxAfr1|scaffold_10024 (7269-7099) | |
| 383-528, gnl|mm7|chr8 (122498883-122499052) | |
| 383-528, gnl|Mm7|chr8 (122499051-122498906) | |
| 383-528, gnl|monDom2|scaffold_13 (57372539-57372705) | |
| 383-528, gnl|oryCun1|scaffold_184243 (14649-14480) | |
| 383-528, gnl|panTro1|chr1 (209740495-209740664) | |
| 383-528, gnl|rheMac2|chr1 (227495812-227495643) | |
| 383-528, gnl|rn3|chr19 (54107747-54107916) | |
| 383-528, gnl|tetNig1|chr18 (10011860-10011708) | |
| 383-528, gnl|xenTro1|scaffold_217 (28629-28449) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-251, gnl|bosTau2|chr28 (428036-428285) | |
| 2-251, gnl|canFam2|chr4 (12789221-12788956) | |
| 2-251, gnl|danRer3|chr1 (52632307-52632567) | |
| 2-251, gnl|dasNov1|scaffold_37980 (4371-4636) | |
| 2-251, gnl|echTel1|scaffold_322900 (7300-7551) | |
| 2-251, gnl|fr1|chrUn (150264697-150264438) | |
| 2-251, gnl|galGal2|chr3 (36187371-36187624) | |
| 2-251, gnl|hg17|chr1 (225907101-225907366) | |
| 2-251, gnl|Hg17|chr1 (225907355-225907106) | |
| 2-251, gnl|loxAfr1|scaffold_10024 (2603-2338) | |
| 2-251, gnl|mm7|chr8 (122502311-122502576) | |
| 2-251, gnl|Mm7|chr8 (122502565-122502316) | |
| 2-251, gnl|monDom2|scaffold_13 (57376843-57377108) | |
| 2-251, gnl|panTro1|chr1 (209744198-209744463) | |
| 2-251, gnl|rheMac2|chr1 (227491936-227491671) | |
| 2-251, gnl|rn3|chr19 (54110823-54111088) | |
| 2-251, gnl|tetNig1|chr18 (10011428-10011169) | |
| 2-251, gnl|xenTro1|scaffold_217 (28322-28065) | |
| 383-528, gnl|bosTau2|chr28 (431320-431465) | |
| 383-528, gnl|canFam2|chr4 (12792083-12791914) | |
| 383-528, gnl|danRer3|chr1 (52630075-52630244) | |
| 383-528, gnl|dasNov1|scaffold_37980 (1146-1316) | |
| 383-528, gnl|echTel1|scaffold_267850 (7343-7513) | |
| 383-528, gnl|fr1|chrUn (150265214-150265045) | |
| 383-528, gnl|galGal2|chr3 (36185608-36185774) | |
| 383-528, gnl|hg17|chr1 (225903086-225903255) | |
| 383-528, gnl|Hg17|chr1 (225903254-225903109) | |
| 383-528, gnl|loxAfr1|scaffold_10024 (7269-7099) | |
| 383-528, gnl|mm7|chr8 (122498883-122499052) | |
| 383-528, gnl|Mm7|chr8 (122499051-122498906) | |
| 383-528, gnl|monDom2|scaffold_13 (57372539-57372705) | |
| 383-528, gnl|oryCun1|scaffold_184243 (14649-14480) | |
| 383-528, gnl|panTro1|chr1 (209740495-209740664) | |
| 383-528, gnl|rheMac2|chr1 (227495812-227495643) | |
| 383-528, gnl|rn3|chr19 (54107747-54107916) | |
| 383-528, gnl|tetNig1|chr18 (10011860-10011708) | |
| 383-528, gnl|xenTro1|scaffold_217 (28629-28449) |