Non-Coding RNA Search

Ss1.1-Ova2-C0003263_D09.5

Sequence:


               
               GCGGGGCGGACGAACAAGAGGCCGGAGGCTCGGCCGTAGGACAGGGCCATGGAGAAGCTA
CGGCGCGTCCTGAGCGGCCAAGACGACGAGGAGCAAGGCCTGACGGCACAGGTCCTGGAT
GCCTCATCCCTGAGTTTCAACACCAGGTTGAAGTGGTTTGTCATATGCTTTGTTGCTGGC
ATTTTCTTTTCAATCCTTGGAACTGGGTTGCTATGGCTTCCCAATGGCGTGAAGCTCTTT
GCAGTATTTTATACCCTTGGAAACCTTGCTGCATTGGCCAGTACGTGCTTTTTAATGGGA
CCTGTGAAGCAACTGAAGAAAATGTTTGAAACAACAAGATTGCTTGCAACAATTATTATG
CTGTTGTGCCTGGTGTTTACCCTGTGTGCTGCTCTCTGGTGGCGGAAGAAGGGGCTGGCC
TTACTCTTCTGCATATTGCAGTTCTTGTCAATGACCTGGTATAGTCTGTCCTACATCCCG
TATGCAAGGGACGCGGTGCTCAAGTGCTGCTCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGGGCGGACGAACAAGAGGCCGGAGGCTCGGCCGTAGGACAGGGCCATGGAGAAGCTA
CGGCGCGTCCTGAGCGGCCAAGACGACGAGGAGCAAGGCCTGACGGCACAGGTCCTGGAT
GCCTCATCCCTGAGTTTCAACACCAGGTTGAAGTGGTTTGTCATATGCTTTGTTGCTGGC
ATTTTCTTTTCAATCCTTGGAACTGGGTTGCTATGGCTTCCCAATGGCGTGAAGCTCTTT
GCAGTATTTTATACCCTTGGAAACCTTGCTGCATTGGCCAGTACGTGCTTTTTAATGGGA
CCTGTGAAGCAACTGAAGAAAATGTTTGAAACAACAAGATTGCTTGCAACAATTATTATG
CTGTTGTGCCTGGTGTTTACCCTGTGTGCTGCTCTCTGGTGGCGGAAGAAGGGGCTGGCC
TTACTCTTCTGCATATTGCAGTTCTTGTCAATGACCTGGTATAGTCTGTCCTACATCCCG
TATGCAAGGGACGCGGTGCTCAAGTGCTGCTCCTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|56605628|ref|NP_001008303.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56605628|ref|NP_001008303.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               169-288, + strand, RNAz p=0.765758

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               169-288, + strand, RNAz p=0.765758

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               49-425, gnl|bosTau2|chr15 (17441485-17441107)
               

               
               49-425, gnl|Mm7|chr11 (46009047-46008659)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-425, gnl|bosTau2|chr15 (17441485-17441107)
               

               
               49-425, gnl|Mm7|chr11 (46009047-46008659)

	49-425, gnl\|bosTau2\|chr15 (17441485-17441107)
	49-425, gnl\|Mm7\|chr11 (46009047-46008659)