Ss1.1-Ova2-C0003264_L20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACCCTGCCATTCAGCCGCTGCAGGCCCCCCAGCCTGCAGTCCATGTCCAGGGTCAAGAA CCCCTGACTGCCTCCATGCTGGCTGCAGCTCCTCCCCAGGAGCAGAAGCAGATGCTGGGG GAGCGTTTGTTCCCACTTATCCAAACAATGCATTCAAACCTGGCTGGAAAAATTACAGGG ATGCTGCTAGAAATCGACAACTCTGAGCTGCTCCACATGCTGGAGTCCCCCGAGTCCCTC CGTTCCAAGGTGGATGAAGCTGTGGCAGTCCTGCAGGCTCATCATGCCAAGAAAGAAGCT GCCCAGAAGGTGGGCACTGTTGCTGCTGCTACCTCTTAAACCAGAAGAGTCAAAAGCCAA ATAACCCCTCACGGCATTCAGCTGAGGTCTGAAGACTTCCTAGTTTGTCTGTGGACCTCT TTCAAGAACCAAGTTACAAATTCAACAGGTCATTTTGTATCAAAAGGTCAATTATGAAGC ACCTAGAATTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACCCTGCCATTCAGCCGCTGCAGGCCCCCCAGCCTGCAGTCCATGTCCAGGGTCAAGAA CCCCTGACTGCCTCCATGCTGGCTGCAGCTCCTCCCCAGGAGCAGAAGCAGATGCTGGGG GAGCGTTTGTTCCCACTTATCCAAACAATGCATTCAAACCTGGCTGGAAAAATTACAGGG ATGCTGCTAGAAATCGACAACTCTGAGCTGCTCCACATGCTGGAGTCCCCCGAGTCCCTC CGTTCCAAGGTGGATGAAGCTGTGGCAGTCCTGCAGGCTCATCATGCCAAGAAAGAAGCT GCCCAGAAGGTGGGCACTGTTGCTGCTGCTACCTCTTAAACCAGAAGAGTCAAAAGCCAA ATAACCCCTCACGGCATTCAGCTGAGGTCTGAAGACTTCCTAGTTTGTCTGTGGACCTCT TTCAAGAACCAAGTTACAAATTCAACAGGTCATTTTGTATCAAAAGGTCAATTATGAAGC ACCTAGAATTTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 31-121, - strand, RNAz p=0.867969 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 31-121, - strand, RNAz p=0.867969 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 31-308, gnl|bosTau2|chr14 (50128311-50128585) | |
| 31-308, gnl|Hg17|chr8 (101788057-101785739) | |
| 31-308, gnl|Mm7|chr17 (24453316-24453587) | |
| 118-269, gnl|bosTau2|chr13 (55827832-55827678) | |
| 118-269, gnl|canFam2|chr24 (35324607-35324767) | |
| 118-269, gnl|danRer3|chr19 (42828150-42828292) | |
| 118-269, gnl|dasNov1|scaffold_17267 (47398-47245) | |
| 118-269, gnl|echTel1|scaffold_316152 (85376-85536) | |
| 118-269, gnl|fr1|chrUn (81200320-81200183) | |
| 118-269, gnl|galGal2|chr20 (4967608-4967456) | |
| 118-269, gnl|hg17|chr20 (43000103-43000265) | |
| 118-269, gnl|Hg17|chr20 (43000115-43000267) | |
| 118-269, gnl|loxAfr1|scaffold_12308 (37324-37162) | |
| 118-269, gnl|mm7|chr2 (163790371-163790532) | |
| 118-269, gnl|Mm7|chr2 (163790383-163790530) | |
| 118-269, gnl|monDom2|scaffold_1 (156796037-156795886) | |
| 118-269, gnl|oryCun1|scaffold_181806 (2791-2950) | |
| 118-269, gnl|panTro1|chr21 (45483199-45483361) | |
| 118-269, gnl|rheMac2|chr10 (19494254-19494092) | |
| 118-269, gnl|rn3|chr3 (154897810-154897971) | |
| 118-269, gnl|tetNig1|chr9 (6339091-6339235) | |
| 118-269, gnl|xenTro1|scaffold_1004 (238989-238844) | |
| 331-492, gnl|bosTau2|chr12 (31266352-31266521) | |
| 331-492, gnl|Hg17|chr15 (92378405-92378578) | |
| 331-492, gnl|Mm7|chr14 (84626879-84626717) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 31-308, gnl|bosTau2|chr14 (50128311-50128585) | |
| 31-308, gnl|Hg17|chr8 (101788057-101785739) | |
| 31-308, gnl|Mm7|chr17 (24453316-24453587) | |
| 118-269, gnl|bosTau2|chr13 (55827832-55827678) | |
| 118-269, gnl|canFam2|chr24 (35324607-35324767) | |
| 118-269, gnl|danRer3|chr19 (42828150-42828292) | |
| 118-269, gnl|dasNov1|scaffold_17267 (47398-47245) | |
| 118-269, gnl|echTel1|scaffold_316152 (85376-85536) | |
| 118-269, gnl|fr1|chrUn (81200320-81200183) | |
| 118-269, gnl|galGal2|chr20 (4967608-4967456) | |
| 118-269, gnl|hg17|chr20 (43000103-43000265) | |
| 118-269, gnl|Hg17|chr20 (43000115-43000267) | |
| 118-269, gnl|loxAfr1|scaffold_12308 (37324-37162) | |
| 118-269, gnl|mm7|chr2 (163790371-163790532) | |
| 118-269, gnl|Mm7|chr2 (163790383-163790530) | |
| 118-269, gnl|monDom2|scaffold_1 (156796037-156795886) | |
| 118-269, gnl|oryCun1|scaffold_181806 (2791-2950) | |
| 118-269, gnl|panTro1|chr21 (45483199-45483361) | |
| 118-269, gnl|rheMac2|chr10 (19494254-19494092) | |
| 118-269, gnl|rn3|chr3 (154897810-154897971) | |
| 118-269, gnl|tetNig1|chr9 (6339091-6339235) | |
| 118-269, gnl|xenTro1|scaffold_1004 (238989-238844) | |
| 331-492, gnl|bosTau2|chr12 (31266352-31266521) | |
| 331-492, gnl|Hg17|chr15 (92378405-92378578) | |
| 331-492, gnl|Mm7|chr14 (84626879-84626717) |