Ss1.1-Ova2-C0003265_H19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTCTTTCAAAAAGAAACAAATTTCTCTCCCTTTTTATTTTTG AAAAACACACAAAACCAATCCCACGGAAGAGTTCCGTGGAGGGCCTCGAGCCCGCAGAAA ACAAGTGTCTGTTAAGGGCCACGGATGGGAAAAGGAAGATGAGCACAGTGGTGAGCTCCA AAGAAGTGAATAAGTTTCAGATGGCCTATTCAAATCTACTGAGAGCCAACATGGATGGGC TGAAGAAGAGGGACAAGAAGAACAAGAGTAAGAAGAGCAAACCAGCACAGTGACAGGCGT GGCCACTACCAATCAGCTGCACCAGTGCAGTTTTCCTGTTTGCTGCTTTCAGTACCTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTCTTTCAAAAAGAAACAAATTTCTCTCCCTTTTTATTTTTG AAAAACACACAAAACCAATCCCACGGAAGAGTTCCGTGGAGGGCCTCGAGCCCGCAGAAA ACAAGTGTCTGTTAAGGGCCACGGATGGGAAAAGGAAGATGAGCACAGTGGTGAGCTCCA AAGAAGTGAATAAGTTTCAGATGGCCTATTCAAATCTACTGAGAGCCAACATGGATGGGC TGAAGAAGAGGGACAAGAAGAACAAGAGTAAGAAGAGCAAACCAGCACAGTGACAGGCGT GGCCACTACCAATCAGCTGCACCAGTGCAGTTTTCCTGTTTGCTGCTTTCAGTACCTCTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 129-235, + strand, RNAz p=0.578873 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 129-235, + strand, RNAz p=0.578873 |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 129-235, gnl|bosTau2|chr10 (23248315-23248421) | |
| 129-235, gnl|canFam2|chr18 (32673215-32673290) | |
| 129-235, gnl|canFam2|chr18 (32673210-32673285) | |
| 129-235, gnl|canFam2|chr30 (10247308-10247438) | |
| 129-235, gnl|canFam2|chr36 (8431352-8431427) | |
| 129-235, gnl|danRer3|chrUn (24155005-24155125) | |
| 129-235, gnl|danRer3|chrUn (24155122-24155047) | |
| 129-235, gnl|dasNov1|scaffold_123817 (5507-5637) | |
| 129-235, gnl|dasNov1|scaffold_269088 (632-686) | |
| 129-235, gnl|dasNov1|scaffold_269088 (632-686) | |
| 129-235, gnl|dasNov1|scaffold_269088 (632-683) | |
| 129-235, gnl|echTel1|scaffold_187903 (2983-3058) | |
| 129-235, gnl|echTel1|scaffold_187903 (2983-3058) | |
| 129-235, gnl|echTel1|scaffold_210399 (9-84) | |
| 129-235, gnl|echTel1|scaffold_316524 (1602-1472) | |
| 129-235, gnl|fr1|chrUn (60025560-60025485) | |
| 129-235, gnl|fr1|chrUn (60025560-60025485) | |
| 129-235, gnl|fr1|chrUn (60025438-60025568) | |
| 129-235, gnl|fr1|chrUn (60025565-60025490) | |
| 129-235, gnl|hg17|chr11 (92908380-92908455) | |
| 129-235, gnl|hg17|chr12 (6418029-6418104) | |
| 129-235, gnl|hg17|chr15 (38117761-38117891) | |
| 129-235, gnl|Hg17|chr15 (38117876-38117770) | |
| 129-235, gnl|hg17|chr17 (45227807-45227879) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26443-26518) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26443-26518) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26565-26435) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26438-26513) | |
| 129-235, gnl|mm7|chr13 (81236668-81236743) | |
| 129-235, gnl|mm7|chr13 (81236668-81236743) | |
| 129-235, gnl|mm7|chr13 (81236663-81236738) | |
| 129-235, gnl|mm7|chr2 (118219756-118219886) | |
| 129-235, gnl|Mm7|chr2 (118219871-118219765) | |
| 129-235, gnl|monDom2|scaffold_11 (9232550-9232473) | |
| 129-235, gnl|monDom2|scaffold_11 (9232555-9232478) | |
| 129-235, gnl|monDom2|scaffold_12 (2696151-2696008) | |
| 129-235, gnl|monDom2|scaffold_39 (1353106-1353031) | |
| 129-235, gnl|oryCun1|scaffold_198559 (64673-64742) | |
| 129-235, gnl|oryCun1|scaffold_198559 (64673-64742) | |
| 129-235, gnl|oryCun1|scaffold_198559 (64650-64739) | |
| 129-235, gnl|oryCun1|scaffold_209781 (144094-143964) | |
| 129-235, gnl|panTro1|chr10 (6952051-6952126) | |
| 129-235, gnl|panTro1|chr16 (38001773-38001903) | |
| 129-235, gnl|panTro1|chr19_random (30835922-30835994) | |
| 129-235, gnl|panTro1|chr9 (94808120-94808195) | |
| 129-235, gnl|rheMac2|chr11 (6591881-6591956) | |
| 129-235, gnl|rheMac2|chr16 (34033423-34033495) | |
| 129-235, gnl|rheMac2|chr7 (18389626-18389756) | |
| 129-235, gnl|rheMac2|chr7 (18389753-18389678) | |
| 129-235, gnl|rn3|chr3 (104806096-104806226) | |
| 129-235, gnl|rn3|chr9 (84896547-84896622) | |
| 129-235, gnl|rn3|chr9 (84896547-84896622) | |
| 129-235, gnl|rn3|chr9 (84896542-84896617) | |
| 129-235, gnl|tetNig1|chr10 (3824966-3824891) | |
| 129-235, gnl|tetNig1|chr10 (3824966-3824891) | |
| 129-235, gnl|tetNig1|chr10 (3824844-3824974) | |
| 129-235, gnl|tetNig1|chr10 (3824971-3824896) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 129-235, gnl|bosTau2|chr10 (23248315-23248421) | |
| 129-235, gnl|canFam2|chr18 (32673215-32673290) | |
| 129-235, gnl|canFam2|chr18 (32673210-32673285) | |
| 129-235, gnl|canFam2|chr30 (10247308-10247438) | |
| 129-235, gnl|canFam2|chr36 (8431352-8431427) | |
| 129-235, gnl|danRer3|chrUn (24155005-24155125) | |
| 129-235, gnl|danRer3|chrUn (24155122-24155047) | |
| 129-235, gnl|dasNov1|scaffold_123817 (5507-5637) | |
| 129-235, gnl|dasNov1|scaffold_269088 (632-686) | |
| 129-235, gnl|dasNov1|scaffold_269088 (632-686) | |
| 129-235, gnl|dasNov1|scaffold_269088 (632-683) | |
| 129-235, gnl|echTel1|scaffold_187903 (2983-3058) | |
| 129-235, gnl|echTel1|scaffold_187903 (2983-3058) | |
| 129-235, gnl|echTel1|scaffold_210399 (9-84) | |
| 129-235, gnl|echTel1|scaffold_316524 (1602-1472) | |
| 129-235, gnl|fr1|chrUn (60025560-60025485) | |
| 129-235, gnl|fr1|chrUn (60025560-60025485) | |
| 129-235, gnl|fr1|chrUn (60025438-60025568) | |
| 129-235, gnl|fr1|chrUn (60025565-60025490) | |
| 129-235, gnl|hg17|chr11 (92908380-92908455) | |
| 129-235, gnl|hg17|chr12 (6418029-6418104) | |
| 129-235, gnl|hg17|chr15 (38117761-38117891) | |
| 129-235, gnl|Hg17|chr15 (38117876-38117770) | |
| 129-235, gnl|hg17|chr17 (45227807-45227879) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26443-26518) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26443-26518) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26565-26435) | |
| 129-235, gnl|loxAfr1|scaffold_2762 (26438-26513) | |
| 129-235, gnl|mm7|chr13 (81236668-81236743) | |
| 129-235, gnl|mm7|chr13 (81236668-81236743) | |
| 129-235, gnl|mm7|chr13 (81236663-81236738) | |
| 129-235, gnl|mm7|chr2 (118219756-118219886) | |
| 129-235, gnl|Mm7|chr2 (118219871-118219765) | |
| 129-235, gnl|monDom2|scaffold_11 (9232550-9232473) | |
| 129-235, gnl|monDom2|scaffold_11 (9232555-9232478) | |
| 129-235, gnl|monDom2|scaffold_12 (2696151-2696008) | |
| 129-235, gnl|monDom2|scaffold_39 (1353106-1353031) | |
| 129-235, gnl|oryCun1|scaffold_198559 (64673-64742) | |
| 129-235, gnl|oryCun1|scaffold_198559 (64673-64742) | |
| 129-235, gnl|oryCun1|scaffold_198559 (64650-64739) | |
| 129-235, gnl|oryCun1|scaffold_209781 (144094-143964) | |
| 129-235, gnl|panTro1|chr10 (6952051-6952126) | |
| 129-235, gnl|panTro1|chr16 (38001773-38001903) | |
| 129-235, gnl|panTro1|chr19_random (30835922-30835994) | |
| 129-235, gnl|panTro1|chr9 (94808120-94808195) | |
| 129-235, gnl|rheMac2|chr11 (6591881-6591956) | |
| 129-235, gnl|rheMac2|chr16 (34033423-34033495) | |
| 129-235, gnl|rheMac2|chr7 (18389626-18389756) | |
| 129-235, gnl|rheMac2|chr7 (18389753-18389678) | |
| 129-235, gnl|rn3|chr3 (104806096-104806226) | |
| 129-235, gnl|rn3|chr9 (84896547-84896622) | |
| 129-235, gnl|rn3|chr9 (84896547-84896622) | |
| 129-235, gnl|rn3|chr9 (84896542-84896617) | |
| 129-235, gnl|tetNig1|chr10 (3824966-3824891) | |
| 129-235, gnl|tetNig1|chr10 (3824966-3824891) | |
| 129-235, gnl|tetNig1|chr10 (3824844-3824974) | |
| 129-235, gnl|tetNig1|chr10 (3824971-3824896) |