Non-Coding RNA Search

Ss1.1-Ova2-C0003265_O18.5

Sequence:


               
               GCGGTTTGGTCGTTCGTTGGAGGAGCTTCGTCTTGTTCTGCTCTGCGATTGCGGCGCTTG
TTCGAGCGCTTACAGCGGCGCGTCGGTCCCAGCAAGGGCCTCAGACTTCAGCTTTGGGTG
AGAGAAGATGGCCCGAACCAAGCAGACCGCTAGGAAGTCCACCGGAGGGAAAGCCCCCCG
CAAACAGCTGGCCACCAAGGCGGCCCGGAAAAGCGCGCCCTCTACTGGCGGGGTGAAGAA
ACCTCATCGCTACAGGCCCGGGACCGTGGCTCTAAGAGAGATCCGTCGTTACCAGAAATC
GACTGAGCTGCTCATCCGGAAGCTACCCTTCCAGAGGTTGGTGAGGGAGATCGCCCAGGA
TTTCAAAACCGACTTGAGGTTTCAAAGTGCAGCCATCGGTGCCCTTCAGGAGGCTAGCGA
GGCATACCTGGTGGGGTTGTTTGAAGATACCAATCTGTGTGCCATCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGTTTGGTCGTTCGTTGGAGGAGCTTCGTCTTGTTCTGCTCTGCGATTGCGGCGCTTG
TTCGAGCGCTTACAGCGGCGCGTCGGTCCCAGCAAGGGCCTCAGACTTCAGCTTTGGGTG
AGAGAAGATGGCCCGAACCAAGCAGACCGCTAGGAAGTCCACCGGAGGGAAAGCCCCCCG
CAAACAGCTGGCCACCAAGGCGGCCCGGAAAAGCGCGCCCTCTACTGGCGGGGTGAAGAA
ACCTCATCGCTACAGGCCCGGGACCGTGGCTCTAAGAGAGATCCGTCGTTACCAGAAATC
GACTGAGCTGCTCATCCGGAAGCTACCCTTCCAGAGGTTGGTGAGGGAGATCGCCCAGGA
TTTCAAAACCGACTTGAGGTTTCAAAGTGCAGCCATCGGTGCCCTTCAGGAGGCTAGCGA
GGCATACCTGGTGGGGTTGTTTGAAGATACCAATCTGTGTGCCATCCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61677559|gb|AAX52120.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61677559|gb|AAX52120.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               247-406, - strand, RNAz p=0.668409

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               247-406, - strand, RNAz p=0.668409

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               128-468, gnl|bosTau2|chr11 (1692759-1692419)
               

               
               128-468, gnl|Hg17|chr2 (175410143-175410483)
               

               
               128-468, gnl|Mm7|chr16 (91164500-91164160)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               128-468, gnl|bosTau2|chr11 (1692759-1692419)
               

               
               128-468, gnl|Hg17|chr2 (175410143-175410483)
               

               
               128-468, gnl|Mm7|chr16 (91164500-91164160)

	128-468, gnl\|bosTau2\|chr11 (1692759-1692419)
	128-468, gnl\|Hg17\|chr2 (175410143-175410483)
	128-468, gnl\|Mm7\|chr16 (91164500-91164160)