Non-Coding RNA Search

Ss1.1-Ova2-C0003271_D01.5

Sequence:


               
               GAGCTCTCCCAGCTGAGCTCCCTAGCGGATCATTGCTTGAGCCCTGTTCTGTGGAAGACT
GGCAGGTGTGTGCCACCTACTTGAAAACTGCCCGAGTTAATATGACTGTTCGGCAGGTAC
TGGCTACAGGCCAGGACTTTCCTTTAGAACCCATGGAGGAGCCAAAAAGAGACATTACTG
CAGATGGTTTGTGCCATCTGCATGACCAGAAAAGCCCTGTAAAACGGAAGAGGTTAAATA
CCAACGACTAAAGCTTAGGGGACTCTCTGGTTGCCTCACACAGGGGCAGGGAAGAACTCA
CCTGTCATGCTTCTGCCTTGGGCCCATCTTAGAGCATAAACTGAGTTTGTCCAGAGAAGT
GTCCTACTCGGCCCAGTTCTAGCTCTTATTAGGTGTGTGTGTGTTTGTCATACCACATTG
GTATAATGGTCCACACAGACGAAAGCATTTGAAGTGAGTTCATATGTCTGTGTCGAGTCA
ACACCTCACAGTTTGCTGATAGGAAATAGTGTCTTTCTCCCAGCACTTTGTGATCTATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCTCTCCCAGCTGAGCTCCCTAGCGGATCATTGCTTGAGCCCTGTTCTGTGGAAGACT
GGCAGGTGTGTGCCACCTACTTGAAAACTGCCCGAGTTAATATGACTGTTCGGCAGGTAC
TGGCTACAGGCCAGGACTTTCCTTTAGAACCCATGGAGGAGCCAAAAAGAGACATTACTG
CAGATGGTTTGTGCCATCTGCATGACCAGAAAAGCCCTGTAAAACGGAAGAGGTTAAATA
CCAACGACTAAAGCTTAGGGGACTCTCTGGTTGCCTCACACAGGGGCAGGGAAGAACTCA
CCTGTCATGCTTCTGCCTTGGGCCCATCTTAGAGCATAAACTGAGTTTGTCCAGAGAAGT
GTCCTACTCGGCCCAGTTCTAGCTCTTATTAGGTGTGTGTGTGTTTGTCATACCACATTG
GTATAATGGTCCACACAGACGAAAGCATTTGAAGTGAGTTCATATGTCTGTGTCGAGTCA
ACACCTCACAGTTTGCTGATAGGAAATAGTGTCTTTCTCCCAGCACTTTGTGATCTATGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               120-238, - strand, RNAz p=0.772706

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-238, - strand, RNAz p=0.772706

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-238, gnl|bosTau2|chr10 (61424928-61424694)
               

               
               4-238, gnl|Hg17|chr14 (77210155-77209921)
               

               
               4-238, gnl|Mm7|chr12 (85691247-85691481)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-238, gnl|bosTau2|chr10 (61424928-61424694)
               

               
               4-238, gnl|Hg17|chr14 (77210155-77209921)
               

               
               4-238, gnl|Mm7|chr12 (85691247-85691481)

	4-238, gnl\|bosTau2\|chr10 (61424928-61424694)
	4-238, gnl\|Hg17\|chr14 (77210155-77209921)
	4-238, gnl\|Mm7\|chr12 (85691247-85691481)